RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 KRTAP5-11Q6L8G4 156 aa5.54□□□□□ -1.52
COLCA2-202ENST00000526216 PRAC1Q96KF2 57 aa5.5□□□□□ -1.53
COLCA2-202ENST00000526216 KTN1-AS1Q86SY8 53 aa5.48□□□□□ -1.53
COLCA2-202ENST00000526216 KRTAP23-1A1A580 65 aa5.46□□□□□ -1.54
COLCA2-202ENST00000526216 KRTAP6-3Q3LI67 103 aa5.46□□□□□ -1.54
COLCA2-202ENST00000526216 KRTAP8-1Q8IUC2 63 aa5.43□□□□□ -1.54
COLCA2-202ENST00000526216 KRTAP19-7Q3SYF9 63 aa5.4□□□□□ -1.55
COLCA2-202ENST00000526216 KRTAP19-5Q3LI72 72 aa5.39□□□□□ -1.55
COLCA2-202ENST00000526216 NEBP20929 6669 aa5.37□□□□□ -1.55
COLCA2-202ENST00000526216 PP632Q6XCG6 107 aa5.37□□□□□ -1.55
COLCA2-202ENST00000526216 KRTAP5-9P26371 169 aa5.33□□□□□ -1.56
COLCA2-202ENST00000526216 MUC12Q9UKN1 5478 aa5.31□□□□□ -1.56
COLCA2-202ENST00000526216 KRTAP12-3P60328 96 aa5.3□□□□□ -1.56
COLCA2-202ENST00000526216 MT1EP04732 61 aa5.29□□□□□ -1.56
COLCA2-202ENST00000526216 H3BS24 57 aa5.28□□□□□ -1.56
COLCA2-202ENST00000526216 KRTAP20-1Q3LI63 56 aa5.28□□□□□ -1.56
COLCA2-202ENST00000526216 SPRR2FQ96RM1 72 aa5.28□□□□□ -1.56
COLCA2-202ENST00000526216 MDN1Q9NU22 5596 aa5.21□□□□□ -1.58
COLCA2-202ENST00000526216 MT1LQ93083 61 aa5.16□□□□□ -1.58
COLCA2-202ENST00000526216 KRTAP15-1Q3LI76 137 aa5.15□□□□□ -1.59
COLCA2-202ENST00000526216 SVIPQ8NHG7 77 aa5.14□□□□□ -1.59
COLCA2-202ENST00000526216 LCE1AQ5T7P2 110 aa5.12□□□□□ -1.59
COLCA2-202ENST00000526216 SPRR2EP22531 72 aa5.1□□□□□ -1.59
COLCA2-202ENST00000526216 SPRR2BP35325 72 aa5.1□□□□□ -1.59
COLCA2-202ENST00000526216 SPRR2AP35326 72 aa5.1□□□□□ -1.59
COLCA2-202ENST00000526216 KRTAP19-3Q7Z4W3 81 aa5.1□□□□□ -1.59
COLCA2-202ENST00000526216 KRTAP5-1Q6L8H4 278 aa5.09□□□□□ -1.59
COLCA2-202ENST00000526216 KRTAP5-4Q6L8H1 288 aa5.02□□□□□ -1.61
COLCA2-202ENST00000526216 MT1GP13640 62 aa5□□□□□ -1.61
COLCA2-202ENST00000526216 MT1MQ8N339 61 aa5□□□□□ -1.61
COLCA2-202ENST00000526216 KRTAP2-3P0C7H8 128 aa4.97□□□□□ -1.61
COLCA2-202ENST00000526216 KRTAP2-4Q9BYR9 128 aa4.97□□□□□ -1.61
COLCA2-202ENST00000526216 KRTAP4-4Q9BYR3 166 aa4.97□□□□□ -1.61
COLCA2-202ENST00000526216 LCE3CQ5T5A8 94 aa4.94□□□□□ -1.62
COLCA2-202ENST00000526216 SPRR2DP22532 72 aa4.93□□□□□ -1.62
COLCA2-202ENST00000526216 KRTAP4-3Q9BYR4 195 aa4.93□□□□□ -1.62
COLCA2-202ENST00000526216 LCE1EQ5T753 118 aa4.86□□□□□ -1.63
COLCA2-202ENST00000526216 GPR98Q8WXG9 6306 aa4.85□□□□□ -1.63
COLCA2-202ENST00000526216 SPRR5A0A1B0GTR4 108 aa4.78□□□□□ -1.64
COLCA2-202ENST00000526216 KRTAP2-2Q9BYT5 123 aa4.78□□□□□ -1.64
COLCA2-202ENST00000526216 KRTAP2-1Q9BYU5 128 aa4.78□□□□□ -1.64
COLCA2-202ENST00000526216 KRTAP9-6A8MVA2 160 aa4.75□□□□□ -1.65
COLCA2-202ENST00000526216 DSTQ03001 7570 aaKnown RBP4.75□□□□□ -1.65
COLCA2-202ENST00000526216 KRTAP5-5Q701N2 237 aaPredicted RBP4.54□□□□□ -1.68
COLCA2-202ENST00000526216 MT1AP04731 61 aa4.38□□□□□ -1.71
COLCA2-202ENST00000526216 LUZP6Q538Z0 58 aa4.37□□□□□ -1.71
COLCA2-202ENST00000526216 KRTAP6-1Q3LI64 71 aa4.36□□□□□ -1.71
COLCA2-202ENST00000526216 SYNE1Q8NF91 8797 aaKnown RBP4.35□□□□□ -1.71
COLCA2-202ENST00000526216 KRTAP5-2Q701N4 177 aa4.32□□□□□ -1.72
COLCA2-202ENST00000526216 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
COLCA2-202ENST00000526216 MT4P47944 62 aa4.28□□□□□ -1.72
COLCA2-202ENST00000526216 HMCN1Q96RW7 5635 aa4.25□□□□□ -1.73
COLCA2-202ENST00000526216 NDUFAF8A1L188 74 aa4.21□□□□□ -1.73
COLCA2-202ENST00000526216 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
COLCA2-202ENST00000526216 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
COLCA2-202ENST00000526216 KRTAP20-2Q3LI61 65 aa4.13□□□□□ -1.75
COLCA2-202ENST00000526216 KRTAP5-10Q6L8G5 202 aa4.1□□□□□ -1.75
COLCA2-202ENST00000526216 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
COLCA2-202ENST00000526216 KRTAP5-7Q6L8G8 165 aa4.03□□□□□ -1.76
COLCA2-202ENST00000526216 KRTAP6-2Q3LI66 62 aa4.02□□□□□ -1.77
COLCA2-202ENST00000526216 MT3P25713 68 aa3.94□□□□□ -1.78
COLCA2-202ENST00000526216 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
COLCA2-202ENST00000526216 AHNAKQ09666 5890 aaKnown RBP3.68□□□□□ -1.82
COLCA2-202ENST00000526216 LCE3DQ9BYE3 92 aa3.66□□□□□ -1.82
COLCA2-202ENST00000526216 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
COLCA2-202ENST00000526216 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
COLCA2-202ENST00000526216 MUC5BQ9HC84 5762 aaPredicted RBP3.53□□□□□ -1.84
COLCA2-202ENST00000526216 INE1O15225 51 aa3.43□□□□□ -1.86
COLCA2-202ENST00000526216 LCE1BQ5T7P3 118 aa3.25□□□□□ -1.89
COLCA2-202ENST00000526216 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
COLCA2-202ENST00000526216 PRM1P04553 51 aa3.03□□□□□ -1.92
COLCA2-202ENST00000526216 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
COLCA2-202ENST00000526216 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
COLCA2-202ENST00000526216 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
COLCA2-202ENST00000526216 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
COLCA2-202ENST00000526216 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
COLCA2-202ENST00000526216 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 13.3 ms