RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 IGIPA6NJ69 53 aa-1.22□□□□□ -2.6
CSDE1-210ENST00000525878 UGGT1Q9NYU2 1555 aa-1.22□□□□□ -2.61
CSDE1-210ENST00000525878 AGLP35573 1532 aa-1.23□□□□□ -2.61
CSDE1-210ENST00000525878 DEFB131AP59861 70 aa-1.23□□□□□ -2.61
CSDE1-210ENST00000525878 SCRIBQ14160 1630 aa-1.23□□□□□ -2.61
CSDE1-210ENST00000525878 CENPFP49454 3210 aa-1.24□□□□□ -2.61
CSDE1-210ENST00000525878 ABCA5Q8WWZ7 1642 aa-1.24□□□□□ -2.61
CSDE1-210ENST00000525878 GNG2P59768 71 aa-1.25□□□□□ -2.61
CSDE1-210ENST00000525878 GNG13Q9P2W3 67 aa-1.25□□□□□ -2.61
CSDE1-210ENST00000525878 BRCA2P51587 3418 aa-1.25□□□□□ -2.61
CSDE1-210ENST00000525878 VCANP13611 3396 aa-1.27□□□□□ -2.61
CSDE1-210ENST00000525878 SERF2P84101 59 aa-1.27□□□□□ -2.61
CSDE1-210ENST00000525878 NMES1Q9C002 83 aa-1.27□□□□□ -2.61
CSDE1-210ENST00000525878 ABCA10Q8WWZ4 1543 aa-1.27□□□□□ -2.61
CSDE1-210ENST00000525878 EFCAB5A4FU69 1503 aa-1.28□□□□□ -2.61
CSDE1-210ENST00000525878 NFAT5O94916 1531 aa-1.28□□□□□ -2.61
CSDE1-210ENST00000525878 CDH23Q9H251 3354 aa-1.29□□□□□ -2.62
CSDE1-210ENST00000525878 H0YGX0 51 aa-1.3□□□□□ -2.62
CSDE1-210ENST00000525878 TFF3Q07654 80 aa-1.3□□□□□ -2.62
CSDE1-210ENST00000525878 ADCY10Q96PN6 1610 aa-1.31□□□□□ -2.62
CSDE1-210ENST00000525878 TRPM2O94759 1503 aa-1.31□□□□□ -2.62
CSDE1-210ENST00000525878 VPS13AQ96RL7 3174 aa-1.32□□□□□ -2.62
CSDE1-210ENST00000525878 CPS1P31327 1500 aa-1.33□□□□□ -2.62
CSDE1-210ENST00000525878 KRTAP19-2Q3LHN2 52 aa-1.33□□□□□ -2.62
CSDE1-210ENST00000525878 S100ZQ8WXG8 99 aa-1.33□□□□□ -2.62
CSDE1-210ENST00000525878 PRXQ9BXM0 1461 aa-1.33□□□□□ -2.62
CSDE1-210ENST00000525878 PDCD5O14737 125 aa-1.36□□□□□ -2.63
CSDE1-210ENST00000525878 ABCC8Q09428 1581 aa-1.36□□□□□ -2.63
CSDE1-210ENST00000525878 SMIM2Q9BVW6 85 aa-1.36□□□□□ -2.63
CSDE1-210ENST00000525878 SMCO4Q9NRQ5 59 aa-1.36□□□□□ -2.63
CSDE1-210ENST00000525878 FANCD2Q9BXW9 1451 aa-1.37□□□□□ -2.63
CSDE1-210ENST00000525878 PLNP26678 52 aa-1.37□□□□□ -2.63
CSDE1-210ENST00000525878 TTTY10Q9BZA0 68 aa-1.37□□□□□ -2.63
CSDE1-210ENST00000525878 A0A087WWC5 75 aa-1.4□□□□□ -2.63
CSDE1-210ENST00000525878 UTRNP46939 3433 aa-1.41□□□□□ -2.64
CSDE1-210ENST00000525878 DUOX1Q9NRD9 1551 aa-1.42□□□□□ -2.64
CSDE1-210ENST00000525878 NDUFA1O15239 70 aa-1.42□□□□□ -2.64
CSDE1-210ENST00000525878 DEFB133Q30KQ1 61 aa-1.42□□□□□ -2.64
CSDE1-210ENST00000525878 ERICH3Q5RHP9 1530 aa-1.43□□□□□ -2.64
CSDE1-210ENST00000525878 RHPN1-AS1Q9BWJ2 59 aa-1.43□□□□□ -2.64
CSDE1-210ENST00000525878 LINC01590Q5TEZ4 76 aa-1.44□□□□□ -2.64
CSDE1-210ENST00000525878 TOMM7Q9P0U1 55 aa-1.46□□□□□ -2.64
CSDE1-210ENST00000525878 CMC2Q9NRP2 79 aa-1.48□□□□□ -2.65
CSDE1-210ENST00000525878 A0A096LNI7 61 aa-1.49□□□□□ -2.65
CSDE1-210ENST00000525878 HTN1P15515 57 aa-1.49□□□□□ -2.65
CSDE1-210ENST00000525878 SMIM5Q71RC9 77 aa-1.49□□□□□ -2.65
CSDE1-210ENST00000525878 TOP2AP11388 1531 aaKnown RBP-1.5□□□□□ -2.65
CSDE1-210ENST00000525878 SAMD9LQ8IVG5 1584 aa-1.5□□□□□ -2.65
CSDE1-210ENST00000525878 DEFB124Q8NES8 71 aa-1.5□□□□□ -2.65
CSDE1-210ENST00000525878 CD52P31358 61 aa-1.51□□□□□ -2.65
CSDE1-210ENST00000525878 MROH2BQ7Z745 1585 aa-1.51□□□□□ -2.65
CSDE1-210ENST00000525878 ATP7AQ04656 1500 aa-1.53□□□□□ -2.65
CSDE1-210ENST00000525878 RPL39P62891 51 aaKnown RBP-1.55□□□□□ -2.66
CSDE1-210ENST00000525878 IQGAP2Q13576 1575 aa-1.59□□□□□ -2.66
CSDE1-210ENST00000525878 RPL39LQ96EH5 51 aaKnown RBP-1.6□□□□□ -2.67
CSDE1-210ENST00000525878 GOLGB1Q14789 3259 aaKnown RBP-1.61□□□□□ -2.67
CSDE1-210ENST00000525878 LINC01556Q5JQF7 62 aa-1.64□□□□□ -2.67
CSDE1-210ENST00000525878 DEFB104AQ8WTQ1 72 aa-1.66□□□□□ -2.68
CSDE1-210ENST00000525878 SMIM31A0A1B0GVY4 71 aa-1.67□□□□□ -2.68
CSDE1-210ENST00000525878 H3BUX3 64 aa-1.68□□□□□ -2.68
CSDE1-210ENST00000525878 SNRPGP15A8MWD9 76 aa-1.69□□□□□ -2.68
CSDE1-210ENST00000525878 GCC2Q8IWJ2 1684 aa-1.76□□□□□ -2.69
CSDE1-210ENST00000525878 K7EIM0 57 aa-1.78□□□□□ -2.69
CSDE1-210ENST00000525878 TOMM5Q8N4H5 51 aa-1.8□□□□□ -2.7
CSDE1-210ENST00000525878 A0A096LPF7 62 aa-1.81□□□□□ -2.7
CSDE1-210ENST00000525878 APELAP0DMC3 54 aa-1.81□□□□□ -2.7
CSDE1-210ENST00000525878 PRCDQ00LT1 54 aa-1.86□□□□□ -2.71
CSDE1-210ENST00000525878 ARHGAP5-AS1Q96IT6 56 aa-1.86□□□□□ -2.71
CSDE1-210ENST00000525878 TMEM167AQ8TBQ9 72 aa-1.9□□□□□ -2.71
CSDE1-210ENST00000525878 HTN3P15516 51 aa-1.92□□□□□ -2.72
CSDE1-210ENST00000525878 SNRPGP62308 76 aaKnown RBP-2.01□□□□□ -2.73
CSDE1-210ENST00000525878 RPL39P5Q59GN2 51 aa-2.01□□□□□ -2.73
CSDE1-210ENST00000525878 Q9Y3F1 56 aa-2.02□□□□□ -2.73
CSDE1-210ENST00000525878 DEFB108AA8MXU0 73 aa-2.06□□□□□ -2.74
CSDE1-210ENST00000525878 H3BSH0 61 aa-2.08□□□□□ -2.74
CSDE1-210ENST00000525878 COX14Q96I36 57 aa-2.13□□□□□ -2.75
CSDE1-210ENST00000525878 DEFB108BQ8NET1 73 aa-2.21□□□□□ -2.76
CSDE1-210ENST00000525878 STATHP02808 62 aa-2.42□□□□□ -2.8
Retrieved 78 of 20,778 RNA–protein pairs in 87 ms