RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 SFTA2Q6UW10 78 aa1.67□□□□□ -2.14
CPNE3-206ENST00000523469 LINC00208Q96KT6 92 aa1.67□□□□□ -2.14
CPNE3-206ENST00000523469 IGIPA6NJ69 53 aa1.66□□□□□ -2.14
CPNE3-206ENST00000523469 CHKB-CPT1BH3BT56 60 aa1.66□□□□□ -2.14
CPNE3-206ENST00000523469 WFDC13Q8IUB5 93 aa1.66□□□□□ -2.14
CPNE3-206ENST00000523469 UMAD1C9J7I0 102 aa1.65□□□□□ -2.15
CPNE3-206ENST00000523469 SMIM13P0DJ93 91 aa1.65□□□□□ -2.15
CPNE3-206ENST00000523469 SPRR2GQ9BYE4 73 aa1.65□□□□□ -2.15
CPNE3-206ENST00000523469 F8WEM9 126 aa1.64□□□□□ -2.15
CPNE3-206ENST00000523469 Q6ZQY7 126 aa1.64□□□□□ -2.15
CPNE3-206ENST00000523469 V9GYV3 84 aa1.64□□□□□ -2.15
CPNE3-206ENST00000523469 ZNF815PA8K554 130 aa1.63□□□□□ -2.15
CPNE3-206ENST00000523469 SPINK7P58062 85 aa1.62□□□□□ -2.15
CPNE3-206ENST00000523469 MYMXA0A1B0GTQ4 84 aa1.61□□□□□ -2.15
CPNE3-206ENST00000523469 H1FX-AS1Q4G0G2 97 aa1.61□□□□□ -2.15
CPNE3-206ENST00000523469 MUC5ACP98088 5654 aa1.6□□□□□ -2.15
CPNE3-206ENST00000523469 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
CPNE3-206ENST00000523469 K7EMI3 77 aa1.6□□□□□ -2.15
CPNE3-206ENST00000523469 COX7BP24311 80 aa1.6□□□□□ -2.15
CPNE3-206ENST00000523469 COX8AP10176 69 aa1.59□□□□□ -2.15
CPNE3-206ENST00000523469 ATP5EP2Q5VTU8 51 aa1.59□□□□□ -2.15
CPNE3-206ENST00000523469 Q6JHZ5 121 aa1.58□□□□□ -2.16
CPNE3-206ENST00000523469 IGLV5-48A0A075B6I7 105 aa1.57□□□□□ -2.16
CPNE3-206ENST00000523469 LEPROTL1O95214 131 aa1.57□□□□□ -2.16
CPNE3-206ENST00000523469 MT1XP80297 61 aa1.57□□□□□ -2.16
CPNE3-206ENST00000523469 BAGE3Q86Y29 109 aa1.57□□□□□ -2.16
CPNE3-206ENST00000523469 SMIM27A0A1W2PRY6 76 aa1.56□□□□□ -2.16
CPNE3-206ENST00000523469 LINC01549A6NIU2 74 aa1.56□□□□□ -2.16
CPNE3-206ENST00000523469 MUSTN1Q8IVN3 82 aa1.56□□□□□ -2.16
CPNE3-206ENST00000523469 PRR15LQ9BU68 103 aa1.56□□□□□ -2.16
CPNE3-206ENST00000523469 LINC01558Q9Y6Z2 57 aa1.56□□□□□ -2.16
CPNE3-206ENST00000523469 UQCR11O14957 56 aa1.55□□□□□ -2.16
CPNE3-206ENST00000523469 C3orf79P0CE67 100 aa1.55□□□□□ -2.16
CPNE3-206ENST00000523469 LINC00575Q6W349 94 aa1.55□□□□□ -2.16
CPNE3-206ENST00000523469 ACYP2P14621 99 aa1.53□□□□□ -2.16
CPNE3-206ENST00000523469 PLAC4Q8WY50 150 aa1.52□□□□□ -2.17
CPNE3-206ENST00000523469 A0A087WVE0 104 aa1.51□□□□□ -2.17
CPNE3-206ENST00000523469 TRBV7-4A0A0J9YYF1 115 aa1.51□□□□□ -2.17
CPNE3-206ENST00000523469 CRIPTQ9P021 101 aa1.51□□□□□ -2.17
CPNE3-206ENST00000523469 ATXN8Q156A1 80 aa1.5□□□□□ -2.17
CPNE3-206ENST00000523469 KRTAP19-3Q7Z4W3 81 aa1.5□□□□□ -2.17
CPNE3-206ENST00000523469 H0YAA0 97 aa1.49□□□□□ -2.17
CPNE3-206ENST00000523469 NDUFB1O75438 58 aa1.49□□□□□ -2.17
CPNE3-206ENST00000523469 KRTAP20-2Q3LI61 65 aa1.49□□□□□ -2.17
CPNE3-206ENST00000523469 S4R3F8 94 aa1.49□□□□□ -2.17
CPNE3-206ENST00000523469 H0Y9P7 68 aa1.48□□□□□ -2.17
CPNE3-206ENST00000523469 LINC00472Q9H8W2 130 aa1.48□□□□□ -2.17
CPNE3-206ENST00000523469 SMIM11BQ8TCY0 68 aa1.47□□□□□ -2.17
CPNE3-206ENST00000523469 LINC01546A6NGU7 62 aa1.46□□□□□ -2.18
CPNE3-206ENST00000523469 SPATA8Q6RVD6 105 aa1.46□□□□□ -2.18
CPNE3-206ENST00000523469 LINC00308Q8TCZ7 52 aa1.45□□□□□ -2.18
CPNE3-206ENST00000523469 NREPQ16612 68 aa1.43□□□□□ -2.18
CPNE3-206ENST00000523469 MT1EP04732 61 aa1.42□□□□□ -2.18
CPNE3-206ENST00000523469 K7EQZ3 153 aa1.41□□□□□ -2.18
CPNE3-206ENST00000523469 MT1GP13640 62 aa1.41□□□□□ -2.18
CPNE3-206ENST00000523469 KRTAP19-7Q3SYF9 63 aa1.4□□□□□ -2.19
CPNE3-206ENST00000523469 A0A1B0GU69 56 aa1.39□□□□□ -2.19
CPNE3-206ENST00000523469 MT1MQ8N339 61 aa1.39□□□□□ -2.19
CPNE3-206ENST00000523469 UBL5Q9BZL1 73 aa1.39□□□□□ -2.19
CPNE3-206ENST00000523469 PLNP26678 52 aa1.38□□□□□ -2.19
CPNE3-206ENST00000523469 SYNE1Q8NF91 8797 aaKnown RBP1.35□□□□□ -2.19
CPNE3-206ENST00000523469 M0QZ58 72 aa1.32□□□□□ -2.2
CPNE3-206ENST00000523469 MRPL34Q9BQ48 92 aaKnown RBP1.32□□□□□ -2.2
CPNE3-206ENST00000523469 KRTAP19-5Q3LI72 72 aa1.3□□□□□ -2.2
CPNE3-206ENST00000523469 MT1LQ93083 61 aa1.3□□□□□ -2.2
CPNE3-206ENST00000523469 MMP24-AS1A0A0U1RRL7 71 aa1.27□□□□□ -2.21
CPNE3-206ENST00000523469 C10orf95Q9H7T3 257 aa1.24□□□□□ -2.21
CPNE3-206ENST00000523469 A0A0D9SG42 100 aa1.23□□□□□ -2.21
CPNE3-206ENST00000523469 H0YGX0 51 aa1.23□□□□□ -2.21
CPNE3-206ENST00000523469 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
CPNE3-206ENST00000523469 TP53AIP1Q9HCN2 124 aa1.22□□□□□ -2.21
CPNE3-206ENST00000523469 KRTAP6-2Q3LI66 62 aa1.15□□□□□ -2.23
CPNE3-206ENST00000523469 PHGR1C9JFL3 82 aa1.12□□□□□ -2.23
CPNE3-206ENST00000523469 KRTAP6-1Q3LI64 71 aa1.12□□□□□ -2.23
CPNE3-206ENST00000523469 MT1AP04731 61 aa1.1□□□□□ -2.23
CPNE3-206ENST00000523469 TNP1P09430 55 aa0.98□□□□□ -2.25
CPNE3-206ENST00000523469 KRTAP21-1Q3LI58 79 aa0.85□□□□□ -2.27
CPNE3-206ENST00000523469 PRM1P04553 51 aa0.66□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 79.4 ms