RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.2
SKP1-211ENST00000523359 STARD9Q9P2P6 4700 aa1.33□□□□□ -2.2
SKP1-211ENST00000523359 DNAH10Q8IVF4 4471 aa1.33□□□□□ -2.2
SKP1-211ENST00000523359 MYCBP2O75592 4640 aa1.32□□□□□ -2.2
SKP1-211ENST00000523359 KMT2DO14686 5537 aa1.32□□□□□ -2.2
SKP1-211ENST00000523359 PLECQ15149 4684 aaKnown RBP1.31□□□□□ -2.2
SKP1-211ENST00000523359 TNP1P09430 55 aa1.31□□□□□ -2.2
SKP1-211ENST00000523359 PKHD1P08F94 4074 aa1.3□□□□□ -2.2
SKP1-211ENST00000523359 FAT1Q14517 4588 aa1.29□□□□□ -2.2
SKP1-211ENST00000523359 C9orf92A6NGG3 77 aa1.29□□□□□ -2.2
SKP1-211ENST00000523359 HUWE1Q7Z6Z7 4374 aaKnown RBP1.29□□□□□ -2.2
SKP1-211ENST00000523359 SRRM2Q9UQ35 2752 aaKnown RBP1.29□□□□□ -2.2
SKP1-211ENST00000523359 DNAH7Q8WXX0 4024 aa1.28□□□□□ -2.2
SKP1-211ENST00000523359 DNAH11Q96DT5 4516 aa1.27□□□□□ -2.21
SKP1-211ENST00000523359 DNAH3Q8TD57 4116 aa1.27□□□□□ -2.21
SKP1-211ENST00000523359 VPS13DQ5THJ4 4388 aa1.26□□□□□ -2.21
SKP1-211ENST00000523359 FAT2Q9NYQ8 4349 aa1.26□□□□□ -2.21
SKP1-211ENST00000523359 LRP2P98164 4655 aa1.24□□□□□ -2.21
SKP1-211ENST00000523359 FAT3Q8TDW7 4589 aa1.23□□□□□ -2.21
SKP1-211ENST00000523359 KRTAP2-3P0C7H8 128 aa1.22□□□□□ -2.21
SKP1-211ENST00000523359 KRTAP5-10Q6L8G5 202 aa1.22□□□□□ -2.21
SKP1-211ENST00000523359 KRTAP2-4Q9BYR9 128 aa1.22□□□□□ -2.21
SKP1-211ENST00000523359 PKHD1L1Q86WI1 4243 aa1.22□□□□□ -2.21
SKP1-211ENST00000523359 DNAH2Q9P225 4427 aa1.22□□□□□ -2.21
SKP1-211ENST00000523359 APOBP04114 4563 aaKnown RBP1.22□□□□□ -2.21
SKP1-211ENST00000523359 LRP1BQ9NZR2 4599 aa1.19□□□□□ -2.22
SKP1-211ENST00000523359 DSTQ03001 7570 aaKnown RBP1.19□□□□□ -2.22
SKP1-211ENST00000523359 DNAH6Q9C0G6 4158 aa1.19□□□□□ -2.22
SKP1-211ENST00000523359 DNAH5Q8TE73 4624 aa1.18□□□□□ -2.22
SKP1-211ENST00000523359 DNAH17Q9UFH2 4485 aa1.17□□□□□ -2.22
SKP1-211ENST00000523359 TNXBP22105 4242 aa1.17□□□□□ -2.22
SKP1-211ENST00000523359 VPS13BQ7Z7G8 4022 aa1.16□□□□□ -2.22
SKP1-211ENST00000523359 SMR3BP02814 79 aaPredicted RBP1.16□□□□□ -2.22
SKP1-211ENST00000523359 PKD1P98161 4303 aa1.16□□□□□ -2.22
SKP1-211ENST00000523359 MDN1Q9NU22 5596 aa1.15□□□□□ -2.22
SKP1-211ENST00000523359 MUC5ACP98088 5654 aa1.15□□□□□ -2.22
SKP1-211ENST00000523359 LRP1Q07954 4544 aaKnown RBP1.15□□□□□ -2.23
SKP1-211ENST00000523359 KRTAP8-1Q8IUC2 63 aa1.14□□□□□ -2.23
SKP1-211ENST00000523359 MUC12Q9UKN1 5478 aa1.14□□□□□ -2.23
SKP1-211ENST00000523359 LPAP08519 4548 aa1.13□□□□□ -2.23
SKP1-211ENST00000523359 M0R2T5 61 aa1.13□□□□□ -2.23
SKP1-211ENST00000523359 KRTAP2-1Q9BYU5 128 aa1.13□□□□□ -2.23
SKP1-211ENST00000523359 USH2AO75445 5202 aa1.13□□□□□ -2.23
SKP1-211ENST00000523359 DNAH8Q96JB1 4490 aa1.1□□□□□ -2.23
SKP1-211ENST00000523359 KRTAP19-3Q7Z4W3 81 aa1.1□□□□□ -2.23
SKP1-211ENST00000523359 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
SKP1-211ENST00000523359 MT1HL1P0DM35 61 aa1.04□□□□□ -2.24
SKP1-211ENST00000523359 PRM1P04553 51 aa0.98□□□□□ -2.25
SKP1-211ENST00000523359 SPRR2GQ9BYE4 73 aa0.97□□□□□ -2.25
SKP1-211ENST00000523359 MUC17Q685J3 4493 aa0.94□□□□□ -2.26
SKP1-211ENST00000523359 FLGP20930 4061 aaPredicted RBP0.94□□□□□ -2.26
SKP1-211ENST00000523359 KRTAP19-5Q3LI72 72 aa0.94□□□□□ -2.26
SKP1-211ENST00000523359 MT1HP80294 61 aa0.93□□□□□ -2.26
SKP1-211ENST00000523359 MT1AP04731 61 aa0.92□□□□□ -2.26
SKP1-211ENST00000523359 SPRR2EP22531 72 aa0.9□□□□□ -2.27
SKP1-211ENST00000523359 SPRR2BP35325 72 aa0.9□□□□□ -2.27
SKP1-211ENST00000523359 SPRR2AP35326 72 aa0.9□□□□□ -2.27
SKP1-211ENST00000523359 KRTAP19-6Q3LI70 58 aa0.9□□□□□ -2.27
SKP1-211ENST00000523359 MT1EP04732 61 aa0.87□□□□□ -2.27
SKP1-211ENST00000523359 SPRR2DP22532 72 aa0.87□□□□□ -2.27
SKP1-211ENST00000523359 KRTAP19-8Q3LI54 63 aa0.87□□□□□ -2.27
SKP1-211ENST00000523359 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
SKP1-211ENST00000523359 KRTAP19-2Q3LHN2 52 aa0.86□□□□□ -2.27
SKP1-211ENST00000523359 MT4P47944 62 aa0.84□□□□□ -2.27
SKP1-211ENST00000523359 MT1LQ93083 61 aa0.84□□□□□ -2.27
SKP1-211ENST00000523359 MT1XP80297 61 aa0.83□□□□□ -2.28
SKP1-211ENST00000523359 SPRR2FQ96RM1 72 aa0.82□□□□□ -2.28
SKP1-211ENST00000523359 SYNE1Q8NF91 8797 aaKnown RBP0.82□□□□□ -2.28
SKP1-211ENST00000523359 MT1FP04733 61 aa0.79□□□□□ -2.28
SKP1-211ENST00000523359 MT2AP02795 61 aa0.78□□□□□ -2.28
SKP1-211ENST00000523359 KRTAP6-2Q3LI66 62 aa0.78□□□□□ -2.28
SKP1-211ENST00000523359 MT1BP07438 61 aa0.76□□□□□ -2.29
SKP1-211ENST00000523359 PHGR1C9JFL3 82 aa0.74□□□□□ -2.29
SKP1-211ENST00000523359 KRTAP19-7Q3SYF9 63 aa0.74□□□□□ -2.29
SKP1-211ENST00000523359 MT1GP13640 62 aa0.69□□□□□ -2.3
SKP1-211ENST00000523359 MT1MQ8N339 61 aa0.67□□□□□ -2.3
SKP1-211ENST00000523359 KRTAP20-2Q3LI61 65 aa0.62□□□□□ -2.31
SKP1-211ENST00000523359 KRTAP6-1Q3LI64 71 aa0.6□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 160 ms