RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 KRTAP2-2Q9BYT5 123 aa3.94□□□□□ -1.78
SDC2-207ENST00000522911 KRTAP2-1Q9BYU5 128 aa3.94□□□□□ -1.78
SDC2-207ENST00000522911 ADM2Q7Z4H4 148 aa3.93□□□□□ -1.78
SDC2-207ENST00000522911 KRTAP8-1Q8IUC2 63 aa3.92□□□□□ -1.78
SDC2-207ENST00000522911 KRTAP25-1Q3LHN0 102 aa3.89□□□□□ -1.79
SDC2-207ENST00000522911 PLAC4Q8WY50 150 aa3.88□□□□□ -1.79
SDC2-207ENST00000522911 KRTAP15-1Q3LI76 137 aa3.86□□□□□ -1.79
SDC2-207ENST00000522911 SPRR2DP22532 72 aa3.84□□□□□ -1.79
SDC2-207ENST00000522911 ROMO1P60602 79 aa3.84□□□□□ -1.79
SDC2-207ENST00000522911 A0A0A0MQY5 61 aa3.82□□□□□ -1.8
SDC2-207ENST00000522911 R4GN34 69 aa3.82□□□□□ -1.8
SDC2-207ENST00000522911 KRTAP10-12P60413 245 aa3.79□□□□□ -1.8
SDC2-207ENST00000522911 P0C880 135 aa3.78□□□□□ -1.8
SDC2-207ENST00000522911 M0QZ58 72 aa3.76□□□□□ -1.81
SDC2-207ENST00000522911 KRTAP10-7P60409 375 aaPredicted RBP3.74□□□□□ -1.81
SDC2-207ENST00000522911 A0A0D9SG42 100 aa3.72□□□□□ -1.81
SDC2-207ENST00000522911 KRTAP13-4Q3LI77 160 aa3.69□□□□□ -1.82
SDC2-207ENST00000522911 DSTQ03001 7570 aaKnown RBP3.64□□□□□ -1.83
SDC2-207ENST00000522911 KRTAP12-1P59990 96 aa3.64□□□□□ -1.83
SDC2-207ENST00000522911 SPINT4Q6UDR6 99 aa3.64□□□□□ -1.83
SDC2-207ENST00000522911 GPR98Q8WXG9 6306 aa3.6□□□□□ -1.83
SDC2-207ENST00000522911 KRTAP19-7Q3SYF9 63 aa3.55□□□□□ -1.84
SDC2-207ENST00000522911 KRTAP19-3Q7Z4W3 81 aa3.54□□□□□ -1.84
SDC2-207ENST00000522911 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
SDC2-207ENST00000522911 MT1EP04732 61 aa3.52□□□□□ -1.85
SDC2-207ENST00000522911 PP632Q6XCG6 107 aa3.5□□□□□ -1.85
SDC2-207ENST00000522911 CAMK2N1Q7Z7J9 78 aa3.46□□□□□ -1.86
SDC2-207ENST00000522911 MT1GP13640 62 aa3.45□□□□□ -1.86
SDC2-207ENST00000522911 HMCN1Q96RW7 5635 aa3.45□□□□□ -1.86
SDC2-207ENST00000522911 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
SDC2-207ENST00000522911 AHNAK2Q8IVF2 5795 aa3.38□□□□□ -1.87
SDC2-207ENST00000522911 KRTAP5-4Q6L8H1 288 aa3.37□□□□□ -1.87
SDC2-207ENST00000522911 KRTAP19-5Q3LI72 72 aa3.36□□□□□ -1.87
SDC2-207ENST00000522911 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
SDC2-207ENST00000522911 MT1MQ8N339 61 aa3.35□□□□□ -1.87
SDC2-207ENST00000522911 TNP1P09430 55 aa3.34□□□□□ -1.87
SDC2-207ENST00000522911 LUZP6Q538Z0 58 aa3.34□□□□□ -1.87
SDC2-207ENST00000522911 MT4P47944 62 aa3.33□□□□□ -1.88
SDC2-207ENST00000522911 MT1LQ93083 61 aa3.33□□□□□ -1.88
SDC2-207ENST00000522911 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
SDC2-207ENST00000522911 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
SDC2-207ENST00000522911 KRTAP5-7Q6L8G8 165 aa3.25□□□□□ -1.89
SDC2-207ENST00000522911 KRTAP4-3Q9BYR4 195 aa3.22□□□□□ -1.89
SDC2-207ENST00000522911 LCE3AQ5TA76 89 aa3.19□□□□□ -1.9
SDC2-207ENST00000522911 SPRR5A0A1B0GTR4 108 aa3.16□□□□□ -1.9
SDC2-207ENST00000522911 KRTAP20-2Q3LI61 65 aa3.15□□□□□ -1.91
SDC2-207ENST00000522911 KRTAP5-5Q701N2 237 aaPredicted RBP3.15□□□□□ -1.91
SDC2-207ENST00000522911 KRTAP12-3P60328 96 aa3.1□□□□□ -1.91
SDC2-207ENST00000522911 MT3P25713 68 aa3.08□□□□□ -1.92
SDC2-207ENST00000522911 KRTAP12-4P60329 112 aa3.08□□□□□ -1.92
SDC2-207ENST00000522911 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
SDC2-207ENST00000522911 SYNE1Q8NF91 8797 aaKnown RBP3.04□□□□□ -1.92
SDC2-207ENST00000522911 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
SDC2-207ENST00000522911 INE1O15225 51 aa2.92□□□□□ -1.94
SDC2-207ENST00000522911 KRTAP5-1Q6L8H4 278 aa2.85□□□□□ -1.95
SDC2-207ENST00000522911 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
SDC2-207ENST00000522911 MT1AP04731 61 aa2.84□□□□□ -1.95
SDC2-207ENST00000522911 LCE3CQ5T5A8 94 aa2.84□□□□□ -1.95
SDC2-207ENST00000522911 MUC5ACP98088 5654 aa2.83□□□□□ -1.96
SDC2-207ENST00000522911 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
SDC2-207ENST00000522911 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
SDC2-207ENST00000522911 KRTAP6-1Q3LI64 71 aa2.81□□□□□ -1.96
SDC2-207ENST00000522911 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
SDC2-207ENST00000522911 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
SDC2-207ENST00000522911 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
SDC2-207ENST00000522911 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.98
SDC2-207ENST00000522911 KRTAP9-6A8MVA2 160 aa2.68□□□□□ -1.98
SDC2-207ENST00000522911 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.03
SDC2-207ENST00000522911 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
SDC2-207ENST00000522911 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
SDC2-207ENST00000522911 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
SDC2-207ENST00000522911 PRM1P04553 51 aa1.99□□□□□ -2.09
SDC2-207ENST00000522911 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
SDC2-207ENST00000522911 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
SDC2-207ENST00000522911 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
SDC2-207ENST00000522911 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
SDC2-207ENST00000522911 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 38.5 ms