RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 MT1BP07438 61 aa-0.23□□□□□ -2.45
PTPN12-213ENST00000519553 RHPN1-AS1Q9BWJ2 59 aa-0.23□□□□□ -2.45
PTPN12-213ENST00000519553 CEP250Q9BV73 2442 aa-0.24□□□□□ -2.45
PTPN12-213ENST00000519553 PCNTO95613 3336 aa-0.25□□□□□ -2.45
PTPN12-213ENST00000519553 MYO15AQ9UKN7 3530 aa-0.25□□□□□ -2.45
PTPN12-213ENST00000519553 RYR2Q92736 4967 aa-0.25□□□□□ -2.45
PTPN12-213ENST00000519553 VPS13CQ709C8 3753 aa-0.25□□□□□ -2.45
PTPN12-213ENST00000519553 TRRAPQ9Y4A5 3859 aa-0.25□□□□□ -2.45
PTPN12-213ENST00000519553 DNAH17Q9UFH2 4485 aa-0.25□□□□□ -2.45
PTPN12-213ENST00000519553 CENPEQ02224 2701 aa-0.25□□□□□ -2.45
PTPN12-213ENST00000519553 DNAH12Q6ZR08 3092 aa-0.25□□□□□ -2.45
PTPN12-213ENST00000519553 CEP350Q5VT06 3117 aa-0.25□□□□□ -2.45
PTPN12-213ENST00000519553 ATP7AQ04656 1500 aa-0.25□□□□□ -2.45
PTPN12-213ENST00000519553 SZT2Q5T011 3432 aa-0.25□□□□□ -2.45
PTPN12-213ENST00000519553 DNAH10Q8IVF4 4471 aa-0.25□□□□□ -2.45
PTPN12-213ENST00000519553 RYR3Q15413 4870 aa-0.25□□□□□ -2.45
PTPN12-213ENST00000519553 DNHD1Q96M86 4753 aa-0.26□□□□□ -2.45
PTPN12-213ENST00000519553 SAMD9LQ8IVG5 1584 aa-0.26□□□□□ -2.45
PTPN12-213ENST00000519553 CD52P31358 61 aa-0.26□□□□□ -2.45
PTPN12-213ENST00000519553 RPL39P62891 51 aaKnown RBP-0.26□□□□□ -2.45
PTPN12-213ENST00000519553 WDFY3Q8IZQ1 3526 aa-0.26□□□□□ -2.45
PTPN12-213ENST00000519553 SPEGQ15772 3267 aa-0.26□□□□□ -2.45
PTPN12-213ENST00000519553 NEBP20929 6669 aa-0.27□□□□□ -2.45
PTPN12-213ENST00000519553 DYNC1H1Q14204 4646 aaKnown RBP-0.27□□□□□ -2.45
PTPN12-213ENST00000519553 WDFY4Q6ZS81 3184 aa-0.27□□□□□ -2.45
PTPN12-213ENST00000519553 A0A096LNI7 61 aa-0.27□□□□□ -2.45
PTPN12-213ENST00000519553 HTN1P15515 57 aa-0.27□□□□□ -2.45
PTPN12-213ENST00000519553 DEFB133Q30KQ1 61 aa-0.27□□□□□ -2.45
PTPN12-213ENST00000519553 TTTY10Q9BZA0 68 aa-0.27□□□□□ -2.45
PTPN12-213ENST00000519553 MUC3AQ02505 3323 aa-0.27□□□□□ -2.45
PTPN12-213ENST00000519553 MKI67P46013 3256 aaKnown RBP-0.28□□□□□ -2.45
PTPN12-213ENST00000519553 ABCA13Q86UQ4 5058 aa-0.28□□□□□ -2.45
PTPN12-213ENST00000519553 MT1FP04733 61 aa-0.28□□□□□ -2.45
PTPN12-213ENST00000519553 RPL39LQ96EH5 51 aaKnown RBP-0.28□□□□□ -2.45
PTPN12-213ENST00000519553 DMDP11532 3685 aa-0.28□□□□□ -2.45
PTPN12-213ENST00000519553 EP400Q96L91 3159 aa-0.29□□□□□ -2.46
PTPN12-213ENST00000519553 DUOX1Q9NRD9 1551 aa-0.3□□□□□ -2.46
PTPN12-213ENST00000519553 DNAH5Q8TE73 4624 aa-0.3□□□□□ -2.46
PTPN12-213ENST00000519553 DCHS1Q96JQ0 3298 aa-0.3□□□□□ -2.46
PTPN12-213ENST00000519553 UNC80Q8N2C7 3258 aa-0.31□□□□□ -2.46
PTPN12-213ENST00000519553 XIRP2A4UGR9 3374 aa-0.31□□□□□ -2.46
PTPN12-213ENST00000519553 H3BUX3 64 aa-0.31□□□□□ -2.46
PTPN12-213ENST00000519553 KRTAP20-1Q3LI63 56 aa-0.31□□□□□ -2.46
PTPN12-213ENST00000519553 DEFB124Q8NES8 71 aa-0.31□□□□□ -2.46
PTPN12-213ENST00000519553 USP34Q70CQ2 3546 aa-0.31□□□□□ -2.46
PTPN12-213ENST00000519553 TOP2AP11388 1531 aaKnown RBP-0.32□□□□□ -2.46
PTPN12-213ENST00000519553 CFAP47Q6ZTR5 3102 aa-0.32□□□□□ -2.46
PTPN12-213ENST00000519553 DEFB104AQ8WTQ1 72 aa-0.32□□□□□ -2.46
PTPN12-213ENST00000519553 LOC400499M0QZD8 3231 aa-0.32□□□□□ -2.46
PTPN12-213ENST00000519553 K7EIM0 57 aa-0.33□□□□□ -2.46
PTPN12-213ENST00000519553 SNRPGP62308 76 aaKnown RBP-0.33□□□□□ -2.46
PTPN12-213ENST00000519553 MROH2BQ7Z745 1585 aa-0.33□□□□□ -2.46
PTPN12-213ENST00000519553 DNAH14Q0VDD8 3507 aa-0.34□□□□□ -2.46
PTPN12-213ENST00000519553 ARHGAP5-AS1Q96IT6 56 aa-0.34□□□□□ -2.46
PTPN12-213ENST00000519553 ASPMQ8IZT6 3477 aa-0.35□□□□□ -2.47
PTPN12-213ENST00000519553 PRCDQ00LT1 54 aa-0.36□□□□□ -2.47
PTPN12-213ENST00000519553 LINC01556Q5JQF7 62 aa-0.36□□□□□ -2.47
PTPN12-213ENST00000519553 BRCA2P51587 3418 aa-0.36□□□□□ -2.47
PTPN12-213ENST00000519553 KRTAP19-6Q3LI70 58 aa-0.38□□□□□ -2.47
PTPN12-213ENST00000519553 CDH23Q9H251 3354 aa-0.39□□□□□ -2.47
PTPN12-213ENST00000519553 CENPFP49454 3210 aa-0.39□□□□□ -2.47
PTPN12-213ENST00000519553 TMEM167AQ8TBQ9 72 aa-0.39□□□□□ -2.47
PTPN12-213ENST00000519553 VCANP13611 3396 aa-0.39□□□□□ -2.47
PTPN12-213ENST00000519553 GCC2Q8IWJ2 1684 aa-0.4□□□□□ -2.47
PTPN12-213ENST00000519553 VPS13AQ96RL7 3174 aa-0.4□□□□□ -2.47
PTPN12-213ENST00000519553 A0A096LPF7 62 aa-0.41□□□□□ -2.48
PTPN12-213ENST00000519553 APELAP0DMC3 54 aa-0.41□□□□□ -2.48
PTPN12-213ENST00000519553 Q9Y3F1 56 aa-0.41□□□□□ -2.48
PTPN12-213ENST00000519553 KRTAP19-2Q3LHN2 52 aa-0.42□□□□□ -2.48
PTPN12-213ENST00000519553 DEFB108AA8MXU0 73 aa-0.43□□□□□ -2.48
PTPN12-213ENST00000519553 H3BSH0 61 aa-0.43□□□□□ -2.48
PTPN12-213ENST00000519553 RPL39P5Q59GN2 51 aa-0.43□□□□□ -2.48
PTPN12-213ENST00000519553 HTN3P15516 51 aa-0.44□□□□□ -2.48
PTPN12-213ENST00000519553 UTRNP46939 3433 aa-0.45□□□□□ -2.48
PTPN12-213ENST00000519553 COX14Q96I36 57 aa-0.49□□□□□ -2.49
PTPN12-213ENST00000519553 GOLGB1Q14789 3259 aaKnown RBP-0.5□□□□□ -2.49
PTPN12-213ENST00000519553 DEFB108BQ8NET1 73 aa-0.51□□□□□ -2.49
PTPN12-213ENST00000519553 STATHP02808 62 aa-0.61□□□□□ -2.51
Retrieved 78 of 20,778 RNA–protein pairs in 75.4 ms