RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 KRTAP10-5P60370 271 aa3.25□□□□□ -1.89
SDCBP-206ENST00000519115 KRTAP12-2P59991 146 aa3.24□□□□□ -1.89
SDCBP-206ENST00000519115 PMAIP1Q13794 54 aa3.24□□□□□ -1.89
SDCBP-206ENST00000519115 SPINT4Q6UDR6 99 aa3.23□□□□□ -1.89
SDCBP-206ENST00000519115 LCE1AQ5T7P2 110 aa3.19□□□□□ -1.9
SDCBP-206ENST00000519115 CAMK2N1Q7Z7J9 78 aa3.19□□□□□ -1.9
SDCBP-206ENST00000519115 MDN1Q9NU22 5596 aa3.18□□□□□ -1.9
SDCBP-206ENST00000519115 NDUFAF8A1L188 74 aa3.18□□□□□ -1.9
SDCBP-206ENST00000519115 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
SDCBP-206ENST00000519115 SPRR5A0A1B0GTR4 108 aa3.17□□□□□ -1.9
SDCBP-206ENST00000519115 ROMO1P60602 79 aa3.17□□□□□ -1.9
SDCBP-206ENST00000519115 MT1XP80297 61 aa3.17□□□□□ -1.9
SDCBP-206ENST00000519115 PRO2289Q9P1D8 64 aa3.16□□□□□ -1.9
SDCBP-206ENST00000519115 KRTAP2-2Q9BYT5 123 aa3.13□□□□□ -1.91
SDCBP-206ENST00000519115 KRTAP2-1Q9BYU5 128 aa3.13□□□□□ -1.91
SDCBP-206ENST00000519115 KRTAP25-1Q3LHN0 102 aa3.12□□□□□ -1.91
SDCBP-206ENST00000519115 KTN1-AS1Q86SY8 53 aa3.1□□□□□ -1.91
SDCBP-206ENST00000519115 C10orf95Q9H7T3 257 aa3.1□□□□□ -1.91
SDCBP-206ENST00000519115 TNP1P09430 55 aa3.08□□□□□ -1.92
SDCBP-206ENST00000519115 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
SDCBP-206ENST00000519115 KRTAP5-7Q6L8G8 165 aa3.06□□□□□ -1.92
SDCBP-206ENST00000519115 PP632Q6XCG6 107 aa3.06□□□□□ -1.92
SDCBP-206ENST00000519115 KRTAP5-9P26371 169 aa3.05□□□□□ -1.92
SDCBP-206ENST00000519115 KRTAP10-7P60409 375 aaPredicted RBP3.03□□□□□ -1.92
SDCBP-206ENST00000519115 DSTQ03001 7570 aaKnown RBP3.03□□□□□ -1.92
SDCBP-206ENST00000519115 MT3P25713 68 aa3.02□□□□□ -1.93
SDCBP-206ENST00000519115 KRTAP5-10Q6L8G5 202 aa3.02□□□□□ -1.93
SDCBP-206ENST00000519115 KRTAP8-1Q8IUC2 63 aa3.02□□□□□ -1.93
SDCBP-206ENST00000519115 SPRR2FQ96RM1 72 aa3.01□□□□□ -1.93
SDCBP-206ENST00000519115 KRTAP10-12P60413 245 aa2.99□□□□□ -1.93
SDCBP-206ENST00000519115 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
SDCBP-206ENST00000519115 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
SDCBP-206ENST00000519115 SPRR2EP22531 72 aa2.95□□□□□ -1.94
SDCBP-206ENST00000519115 SPRR2BP35325 72 aa2.95□□□□□ -1.94
SDCBP-206ENST00000519115 SPRR2AP35326 72 aa2.95□□□□□ -1.94
SDCBP-206ENST00000519115 HMCN1Q96RW7 5635 aa2.89□□□□□ -1.95
SDCBP-206ENST00000519115 LCE3AQ5TA76 89 aa2.86□□□□□ -1.95
SDCBP-206ENST00000519115 SPRR2DP22532 72 aa2.85□□□□□ -1.95
SDCBP-206ENST00000519115 KRTAP19-7Q3SYF9 63 aa2.82□□□□□ -1.96
SDCBP-206ENST00000519115 KRTAP12-3P60328 96 aa2.81□□□□□ -1.96
SDCBP-206ENST00000519115 MT1EP04732 61 aa2.8□□□□□ -1.96
SDCBP-206ENST00000519115 KRTAP19-5Q3LI72 72 aa2.79□□□□□ -1.96
SDCBP-206ENST00000519115 LCE1EQ5T753 118 aa2.78□□□□□ -1.96
SDCBP-206ENST00000519115 KRTAP19-3Q7Z4W3 81 aa2.75□□□□□ -1.97
SDCBP-206ENST00000519115 MUC5ACP98088 5654 aa2.75□□□□□ -1.97
SDCBP-206ENST00000519115 KRTAP5-4Q6L8H1 288 aa2.71□□□□□ -1.98
SDCBP-206ENST00000519115 MT1LQ93083 61 aa2.7□□□□□ -1.98
SDCBP-206ENST00000519115 MT1GP13640 62 aa2.68□□□□□ -1.98
SDCBP-206ENST00000519115 KRTAP5-1Q6L8H4 278 aa2.68□□□□□ -1.98
SDCBP-206ENST00000519115 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
SDCBP-206ENST00000519115 MT1MQ8N339 61 aa2.66□□□□□ -1.98
SDCBP-206ENST00000519115 LCE3CQ5T5A8 94 aa2.64□□□□□ -1.99
SDCBP-206ENST00000519115 LUZP6Q538Z0 58 aa2.63□□□□□ -1.99
SDCBP-206ENST00000519115 KRTAP4-3Q9BYR4 195 aa2.62□□□□□ -1.99
SDCBP-206ENST00000519115 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
SDCBP-206ENST00000519115 MT4P47944 62 aa2.49□□□□□ -2.01
SDCBP-206ENST00000519115 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
SDCBP-206ENST00000519115 KRTAP9-6A8MVA2 160 aa2.41□□□□□ -2.02
SDCBP-206ENST00000519115 KRTAP5-5Q701N2 237 aaPredicted RBP2.41□□□□□ -2.02
SDCBP-206ENST00000519115 KRTAP12-4P60329 112 aa2.33□□□□□ -2.04
SDCBP-206ENST00000519115 KRTAP20-2Q3LI61 65 aa2.33□□□□□ -2.04
SDCBP-206ENST00000519115 MT1AP04731 61 aa2.29□□□□□ -2.04
SDCBP-206ENST00000519115 SYNE1Q8NF91 8797 aaKnown RBP2.29□□□□□ -2.04
SDCBP-206ENST00000519115 KRTAP6-1Q3LI64 71 aa2.28□□□□□ -2.04
SDCBP-206ENST00000519115 OBSCNQ5VST9 7968 aa2.28□□□□□ -2.05
SDCBP-206ENST00000519115 LCE3EQ5T5B0 92 aa2.2□□□□□ -2.06
SDCBP-206ENST00000519115 KRTAP5-8O75690 187 aa2.17□□□□□ -2.06
SDCBP-206ENST00000519115 KRTAP6-2Q3LI66 62 aa2.16□□□□□ -2.06
SDCBP-206ENST00000519115 INE1O15225 51 aa2.08□□□□□ -2.08
SDCBP-206ENST00000519115 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
SDCBP-206ENST00000519115 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
SDCBP-206ENST00000519115 LCE1CQ5T751 118 aa1.8□□□□□ -2.12
SDCBP-206ENST00000519115 LCE1BQ5T7P3 118 aa1.8□□□□□ -2.12
SDCBP-206ENST00000519115 PRM1P04553 51 aa1.59□□□□□ -2.15
SDCBP-206ENST00000519115 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
SDCBP-206ENST00000519115 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
SDCBP-206ENST00000519115 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
SDCBP-206ENST00000519115 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 84.5 ms