RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 XIRP2A4UGR9 3374 aa-3.26□□□□□ -2.93
PCM1-208ENST00000518877 TFF3Q07654 80 aa-3.27□□□□□ -2.93
PCM1-208ENST00000518877 IQGAP3Q86VI3 1631 aa-3.29□□□□□ -2.94
PCM1-208ENST00000518877 SMIM2Q9BVW6 85 aa-3.29□□□□□ -2.94
PCM1-208ENST00000518877 CCDC18Q5T9S5 1454 aa-3.3□□□□□ -2.94
PCM1-208ENST00000518877 AGLP35573 1532 aa-3.31□□□□□ -2.94
PCM1-208ENST00000518877 LOC400499M0QZD8 3231 aa-3.31□□□□□ -2.94
PCM1-208ENST00000518877 DEFB133Q30KQ1 61 aa-3.32□□□□□ -2.94
PCM1-208ENST00000518877 KRTAP19-2Q3LHN2 52 aa-3.35□□□□□ -2.95
PCM1-208ENST00000518877 UGGT2Q9NYU1 1516 aa-3.36□□□□□ -2.95
PCM1-208ENST00000518877 GNG2P59768 71 aa-3.37□□□□□ -2.95
PCM1-208ENST00000518877 RHPN1-AS1Q9BWJ2 59 aa-3.37□□□□□ -2.95
PCM1-208ENST00000518877 CLTCL1P53675 1640 aa-3.39□□□□□ -2.95
PCM1-208ENST00000518877 PLNP26678 52 aa-3.39□□□□□ -2.95
PCM1-208ENST00000518877 ASPMQ8IZT6 3477 aa-3.4□□□□□ -2.95
PCM1-208ENST00000518877 RB1CC1Q8TDY2 1594 aa-3.41□□□□□ -2.96
PCM1-208ENST00000518877 TRPM2O94759 1503 aa-3.41□□□□□ -2.96
PCM1-208ENST00000518877 DDX60Q8IY21 1712 aaKnown RBP-3.41□□□□□ -2.96
PCM1-208ENST00000518877 CD52P31358 61 aa-3.42□□□□□ -2.96
PCM1-208ENST00000518877 CPS1P31327 1500 aa-3.44□□□□□ -2.96
PCM1-208ENST00000518877 ABCA5Q8WWZ7 1642 aa-3.44□□□□□ -2.96
PCM1-208ENST00000518877 LINC01590Q5TEZ4 76 aa-3.46□□□□□ -2.96
PCM1-208ENST00000518877 HTN1P15515 57 aa-3.47□□□□□ -2.96
PCM1-208ENST00000518877 BRCA2P51587 3418 aa-3.48□□□□□ -2.97
PCM1-208ENST00000518877 PDCD5O14737 125 aa-3.49□□□□□ -2.97
PCM1-208ENST00000518877 TOMM7Q9P0U1 55 aa-3.49□□□□□ -2.97
PCM1-208ENST00000518877 A0A096LNI7 61 aa-3.51□□□□□ -2.97
PCM1-208ENST00000518877 SMCO4Q9NRQ5 59 aa-3.51□□□□□ -2.97
PCM1-208ENST00000518877 VCANP13611 3396 aa-3.51□□□□□ -2.97
PCM1-208ENST00000518877 CENPFP49454 3210 aa-3.51□□□□□ -2.97
PCM1-208ENST00000518877 PRXQ9BXM0 1461 aa-3.53□□□□□ -2.97
PCM1-208ENST00000518877 ABCA10Q8WWZ4 1543 aa-3.53□□□□□ -2.97
PCM1-208ENST00000518877 IQGAP1P46940 1657 aa-3.53□□□□□ -2.97
PCM1-208ENST00000518877 CDH23Q9H251 3354 aa-3.55□□□□□ -2.98
PCM1-208ENST00000518877 NFAT5O94916 1531 aa-3.55□□□□□ -2.98
PCM1-208ENST00000518877 EFCAB5A4FU69 1503 aa-3.56□□□□□ -2.98
PCM1-208ENST00000518877 NDUFA1O15239 70 aa-3.58□□□□□ -2.98
PCM1-208ENST00000518877 ADCY10Q96PN6 1610 aa-3.59□□□□□ -2.98
PCM1-208ENST00000518877 VPS13AQ96RL7 3174 aa-3.65□□□□□ -2.99
PCM1-208ENST00000518877 A0A087WWC5 75 aa-3.65□□□□□ -2.99
PCM1-208ENST00000518877 DEFB124Q8NES8 71 aa-3.65□□□□□ -2.99
PCM1-208ENST00000518877 ABCC8Q09428 1581 aa-3.72□□□□□ -3
PCM1-208ENST00000518877 FANCD2Q9BXW9 1451 aa-3.72□□□□□ -3
PCM1-208ENST00000518877 SMIM5Q71RC9 77 aa-3.73□□□□□ -3.01
PCM1-208ENST00000518877 CMC2Q9NRP2 79 aa-3.73□□□□□ -3.01
PCM1-208ENST00000518877 DUOX1Q9NRD9 1551 aa-3.75□□□□□ -3.01
PCM1-208ENST00000518877 ERICH3Q5RHP9 1530 aa-3.81□□□□□ -3.02
PCM1-208ENST00000518877 LINC01556Q5JQF7 62 aa-3.86□□□□□ -3.03
PCM1-208ENST00000518877 TOP2AP11388 1531 aaKnown RBP-3.86□□□□□ -3.03
PCM1-208ENST00000518877 SAMD9LQ8IVG5 1584 aa-3.88□□□□□ -3.03
PCM1-208ENST00000518877 RPL39P62891 51 aaKnown RBP-3.89□□□□□ -3.03
PCM1-208ENST00000518877 UTRNP46939 3433 aa-3.93□□□□□ -3.04
PCM1-208ENST00000518877 ATP7AQ04656 1500 aa-4□□□□□ -3.05
PCM1-208ENST00000518877 RPL39LQ96EH5 51 aaKnown RBP-4□□□□□ -3.05
PCM1-208ENST00000518877 H3BUX3 64 aa-4.03□□□□□ -3.05
PCM1-208ENST00000518877 DEFB104AQ8WTQ1 72 aa-4.05□□□□□ -3.06
PCM1-208ENST00000518877 MROH2BQ7Z745 1585 aa-4.06□□□□□ -3.06
PCM1-208ENST00000518877 APELAP0DMC3 54 aa-4.27□□□□□ -3.09
PCM1-208ENST00000518877 SNRPGP15A8MWD9 76 aa-4.29□□□□□ -3.1
PCM1-208ENST00000518877 A0A096LPF7 62 aa-4.32□□□□□ -3.1
PCM1-208ENST00000518877 K7EIM0 57 aa-4.34□□□□□ -3.1
PCM1-208ENST00000518877 SMIM31A0A1B0GVY4 71 aa-4.35□□□□□ -3.11
PCM1-208ENST00000518877 IQGAP2Q13576 1575 aa-4.38□□□□□ -3.11
PCM1-208ENST00000518877 GOLGB1Q14789 3259 aaKnown RBP-4.45□□□□□ -3.12
PCM1-208ENST00000518877 PRCDQ00LT1 54 aa-4.46□□□□□ -3.12
PCM1-208ENST00000518877 TOMM5Q8N4H5 51 aa-4.48□□□□□ -3.13
PCM1-208ENST00000518877 HTN3P15516 51 aa-4.49□□□□□ -3.13
PCM1-208ENST00000518877 ARHGAP5-AS1Q96IT6 56 aa-4.49□□□□□ -3.13
PCM1-208ENST00000518877 TMEM167AQ8TBQ9 72 aa-4.54□□□□□ -3.14
PCM1-208ENST00000518877 Q9Y3F1 56 aa-4.72□□□□□ -3.17
PCM1-208ENST00000518877 H3BSH0 61 aa-4.85□□□□□ -3.19
PCM1-208ENST00000518877 SNRPGP62308 76 aaKnown RBP-4.86□□□□□ -3.19
PCM1-208ENST00000518877 GCC2Q8IWJ2 1684 aa-4.89□□□□□ -3.19
PCM1-208ENST00000518877 RPL39P5Q59GN2 51 aa-4.9□□□□□ -3.19
PCM1-208ENST00000518877 DEFB108AA8MXU0 73 aa-4.96□□□□□ -3.2
PCM1-208ENST00000518877 COX14Q96I36 57 aa-5.01□□□□□ -3.21
PCM1-208ENST00000518877 DEFB108BQ8NET1 73 aa-5.27□□□□□ -3.25
PCM1-208ENST00000518877 STATHP02808 62 aa-5.67□□□□□ -3.32
Retrieved 78 of 20,778 RNA–protein pairs in 65.6 ms