RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 ROMO1P60602 79 aa2.45□□□□□ -2.02
CCDC6-203ENST00000518638 ETDBQ3ZM63 59 aa2.45□□□□□ -2.02
CCDC6-203ENST00000518638 ATOX1O00244 68 aa2.44□□□□□ -2.02
CCDC6-203ENST00000518638 BAALC-AS2P0C853 105 aa2.44□□□□□ -2.02
CCDC6-203ENST00000518638 ATP5EP56381 51 aaPredicted RBP2.44□□□□□ -2.02
CCDC6-203ENST00000518638 H0YAA0 97 aa2.43□□□□□ -2.02
CCDC6-203ENST00000518638 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
CCDC6-203ENST00000518638 COX8AP10176 69 aa2.42□□□□□ -2.02
CCDC6-203ENST00000518638 KRTAP5-10Q6L8G5 202 aa2.42□□□□□ -2.02
CCDC6-203ENST00000518638 C14orf132Q9NPU4 83 aa2.42□□□□□ -2.02
CCDC6-203ENST00000518638 NREPQ16612 68 aa2.41□□□□□ -2.02
CCDC6-203ENST00000518638 HIGD1BQ9P298 99 aa2.41□□□□□ -2.02
CCDC6-203ENST00000518638 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.02
CCDC6-203ENST00000518638 JMJD7-PLA2G4BH0Y9G9 81 aa2.4□□□□□ -2.03
CCDC6-203ENST00000518638 SERP2Q8N6R1 65 aa2.4□□□□□ -2.03
CCDC6-203ENST00000518638 AHNAK2Q8IVF2 5795 aa2.39□□□□□ -2.03
CCDC6-203ENST00000518638 LOC110117498A0A087WWA1 95 aa2.39□□□□□ -2.03
CCDC6-203ENST00000518638 HCG22E2RYF7 251 aa2.39□□□□□ -2.03
CCDC6-203ENST00000518638 ACYP1P07311 99 aa2.38□□□□□ -2.03
CCDC6-203ENST00000518638 Q1T7F1 81 aa2.38□□□□□ -2.03
CCDC6-203ENST00000518638 NDUFC1O43677 76 aa2.37□□□□□ -2.03
CCDC6-203ENST00000518638 CASC2Q6XLA1 102 aa2.37□□□□□ -2.03
CCDC6-203ENST00000518638 MT4P47944 62 aa2.36□□□□□ -2.03
CCDC6-203ENST00000518638 LINC00643Q86TS7 51 aa2.35□□□□□ -2.03
CCDC6-203ENST00000518638 C20orf197Q8N268 126 aa2.34□□□□□ -2.03
CCDC6-203ENST00000518638 CYSTM1Q9H1C7 97 aa2.32□□□□□ -2.04
CCDC6-203ENST00000518638 H7BZZ5 65 aa2.31□□□□□ -2.04
CCDC6-203ENST00000518638 ATXN8Q156A1 80 aa2.31□□□□□ -2.04
CCDC6-203ENST00000518638 KRTAP19-3Q7Z4W3 81 aa2.31□□□□□ -2.04
CCDC6-203ENST00000518638 CYP4F30PQ9H0H9 118 aa2.31□□□□□ -2.04
CCDC6-203ENST00000518638 TP53AIP1Q9HCN2 124 aa2.3□□□□□ -2.04
CCDC6-203ENST00000518638 M0QZ58 72 aa2.28□□□□□ -2.04
CCDC6-203ENST00000518638 MIR22HGQ0VDD5 57 aa2.28□□□□□ -2.04
CCDC6-203ENST00000518638 A0A087WVE0 104 aa2.26□□□□□ -2.05
CCDC6-203ENST00000518638 SPTSSBQ8NFR3 76 aa2.26□□□□□ -2.05
CCDC6-203ENST00000518638 CDC42SE1Q9NRR8 79 aa2.26□□□□□ -2.05
CCDC6-203ENST00000518638 TRAV22A0A0B4J277 110 aa2.24□□□□□ -2.05
CCDC6-203ENST00000518638 MT1EP04732 61 aa2.24□□□□□ -2.05
CCDC6-203ENST00000518638 COA5Q86WW8 74 aa2.24□□□□□ -2.05
CCDC6-203ENST00000518638 LOC101927531A0A1B0GV80 90 aa2.23□□□□□ -2.05
CCDC6-203ENST00000518638 MT1GP13640 62 aa2.23□□□□□ -2.05
CCDC6-203ENST00000518638 KRTAP19-7Q3SYF9 63 aa2.23□□□□□ -2.05
CCDC6-203ENST00000518638 CHKB-CPT1BH3BT56 60 aa2.21□□□□□ -2.06
CCDC6-203ENST00000518638 KRTAP13-4Q3LI77 160 aa2.21□□□□□ -2.06
CCDC6-203ENST00000518638 ATP5EP2Q5VTU8 51 aa2.19□□□□□ -2.06
CCDC6-203ENST00000518638 UBL5Q9BZL1 73 aa2.18□□□□□ -2.06
CCDC6-203ENST00000518638 DMAC1Q96GE9 116 aa2.16□□□□□ -2.06
CCDC6-203ENST00000518638 MT1MQ8N339 61 aa2.15□□□□□ -2.07
CCDC6-203ENST00000518638 KRTAP20-2Q3LI61 65 aa2.14□□□□□ -2.07
CCDC6-203ENST00000518638 SNURFQ9Y675 71 aa2.11□□□□□ -2.07
CCDC6-203ENST00000518638 INE1O15225 51 aa2.1□□□□□ -2.07
CCDC6-203ENST00000518638 KRTAP12-4P60329 112 aa2.1□□□□□ -2.07
CCDC6-203ENST00000518638 PRR15LQ9BU68 103 aa2.1□□□□□ -2.07
CCDC6-203ENST00000518638 H0Y9P7 68 aa2.08□□□□□ -2.08
CCDC6-203ENST00000518638 KRTAP12-1P59990 96 aa2.08□□□□□ -2.08
CCDC6-203ENST00000518638 KRTAP19-5Q3LI72 72 aa2.08□□□□□ -2.08
CCDC6-203ENST00000518638 MT1LQ93083 61 aa2.08□□□□□ -2.08
CCDC6-203ENST00000518638 LINC01558Q9Y6Z2 57 aa2.07□□□□□ -2.08
CCDC6-203ENST00000518638 A0A0D9SG42 100 aa2.06□□□□□ -2.08
CCDC6-203ENST00000518638 MUC5ACP98088 5654 aa2.05□□□□□ -2.08
CCDC6-203ENST00000518638 KRTAP12-3P60328 96 aa2.05□□□□□ -2.08
CCDC6-203ENST00000518638 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
CCDC6-203ENST00000518638 UQCR11O14957 56 aa2.02□□□□□ -2.09
CCDC6-203ENST00000518638 LINC00208Q96KT6 92 aa2.02□□□□□ -2.09
CCDC6-203ENST00000518638 SPATA8Q6RVD6 105 aa2.01□□□□□ -2.09
CCDC6-203ENST00000518638 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
CCDC6-203ENST00000518638 C10orf95Q9H7T3 257 aa1.95□□□□□ -2.1
CCDC6-203ENST00000518638 ACYP2P14621 99 aa1.94□□□□□ -2.1
CCDC6-203ENST00000518638 SYNE1Q8NF91 8797 aaKnown RBP1.93□□□□□ -2.1
CCDC6-203ENST00000518638 A0A1B0GU69 56 aa1.87□□□□□ -2.11
CCDC6-203ENST00000518638 TNP1P09430 55 aa1.87□□□□□ -2.11
CCDC6-203ENST00000518638 MT1AP04731 61 aa1.79□□□□□ -2.12
CCDC6-203ENST00000518638 KRTAP6-1Q3LI64 71 aa1.76□□□□□ -2.13
CCDC6-203ENST00000518638 KRTAP6-2Q3LI66 62 aa1.75□□□□□ -2.13
CCDC6-203ENST00000518638 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
CCDC6-203ENST00000518638 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
CCDC6-203ENST00000518638 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
CCDC6-203ENST00000518638 PRM1P04553 51 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 47.4 ms