RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 MT2AP02795 61 aa-1.13□□□□□ -2.59
SCARNA15.2-201ENST00000516409 MT1MQ8N339 61 aa-1.13□□□□□ -2.59
SCARNA15.2-201ENST00000516409 TLN1Q9Y490 2541 aaKnown RBP-1.13□□□□□ -2.59
SCARNA15.2-201ENST00000516409 MYO15AQ9UKN7 3530 aa-1.17□□□□□ -2.6
SCARNA15.2-201ENST00000516409 RPL39P62891 51 aaKnown RBP-1.18□□□□□ -2.6
SCARNA15.2-201ENST00000516409 ATP7AQ04656 1500 aa-1.19□□□□□ -2.6
SCARNA15.2-201ENST00000516409 SAMD9LQ8IVG5 1584 aa-1.21□□□□□ -2.6
SCARNA15.2-201ENST00000516409 ATMQ13315 3056 aa-1.23□□□□□ -2.61
SCARNA15.2-201ENST00000516409 LINC01590Q5TEZ4 76 aa-1.24□□□□□ -2.61
SCARNA15.2-201ENST00000516409 FRYLO94915 3013 aa-1.24□□□□□ -2.61
SCARNA15.2-201ENST00000516409 DMDP11532 3685 aa-1.26□□□□□ -2.61
SCARNA15.2-201ENST00000516409 CEP250Q9BV73 2442 aa-1.26□□□□□ -2.61
SCARNA15.2-201ENST00000516409 RPL39LQ96EH5 51 aaKnown RBP-1.27□□□□□ -2.61
SCARNA15.2-201ENST00000516409 FREM2Q5SZK8 3169 aa-1.28□□□□□ -2.61
SCARNA15.2-201ENST00000516409 DUOX1Q9NRD9 1551 aa-1.29□□□□□ -2.62
SCARNA15.2-201ENST00000516409 ABCA13Q86UQ4 5058 aa-1.29□□□□□ -2.62
SCARNA15.2-201ENST00000516409 MT1BP07438 61 aa-1.32□□□□□ -2.62
SCARNA15.2-201ENST00000516409 PCNTO95613 3336 aa-1.33□□□□□ -2.62
SCARNA15.2-201ENST00000516409 RPS29P62273 56 aaKnown RBP-1.33□□□□□ -2.62
SCARNA15.2-201ENST00000516409 TOP2AP11388 1531 aaKnown RBP-1.34□□□□□ -2.62
SCARNA15.2-201ENST00000516409 RHPN1-AS1Q9BWJ2 59 aa-1.34□□□□□ -2.62
SCARNA15.2-201ENST00000516409 WDFY3Q8IZQ1 3526 aa-1.36□□□□□ -2.63
SCARNA15.2-201ENST00000516409 CEP350Q5VT06 3117 aa-1.39□□□□□ -2.63
SCARNA15.2-201ENST00000516409 SZT2Q5T011 3432 aa-1.4□□□□□ -2.63
SCARNA15.2-201ENST00000516409 A0A096LNI7 61 aa-1.4□□□□□ -2.63
SCARNA15.2-201ENST00000516409 WDFY4Q6ZS81 3184 aa-1.4□□□□□ -2.63
SCARNA15.2-201ENST00000516409 DEFB104AQ8WTQ1 72 aa-1.42□□□□□ -2.64
SCARNA15.2-201ENST00000516409 MROH2BQ7Z745 1585 aa-1.44□□□□□ -2.64
SCARNA15.2-201ENST00000516409 DNAH12Q6ZR08 3092 aa-1.45□□□□□ -2.64
SCARNA15.2-201ENST00000516409 MUC3AQ02505 3323 aa-1.45□□□□□ -2.64
SCARNA15.2-201ENST00000516409 DEFB133Q30KQ1 61 aa-1.47□□□□□ -2.64
SCARNA15.2-201ENST00000516409 BOD1L1Q8NFC6 3051 aa-1.47□□□□□ -2.65
SCARNA15.2-201ENST00000516409 HTN1P15515 57 aa-1.49□□□□□ -2.65
SCARNA15.2-201ENST00000516409 XIRP2A4UGR9 3374 aa-1.53□□□□□ -2.65
SCARNA15.2-201ENST00000516409 SPEGQ15772 3267 aa-1.53□□□□□ -2.65
SCARNA15.2-201ENST00000516409 MT1FP04733 61 aa-1.54□□□□□ -2.66
SCARNA15.2-201ENST00000516409 MKI67P46013 3256 aaKnown RBP-1.55□□□□□ -2.66
SCARNA15.2-201ENST00000516409 SNRPGP62308 76 aaKnown RBP-1.56□□□□□ -2.66
SCARNA15.2-201ENST00000516409 DEFB124Q8NES8 71 aa-1.59□□□□□ -2.66
SCARNA15.2-201ENST00000516409 TTTY10Q9BZA0 68 aa-1.6□□□□□ -2.67
SCARNA15.2-201ENST00000516409 CENPEQ02224 2701 aa-1.62□□□□□ -2.67
SCARNA15.2-201ENST00000516409 CD52P31358 61 aa-1.65□□□□□ -2.67
SCARNA15.2-201ENST00000516409 EP400Q96L91 3159 aa-1.65□□□□□ -2.67
SCARNA15.2-201ENST00000516409 DCHS1Q96JQ0 3298 aa-1.68□□□□□ -2.68
SCARNA15.2-201ENST00000516409 GCC2Q8IWJ2 1684 aa-1.68□□□□□ -2.68
SCARNA15.2-201ENST00000516409 KRTAP20-1Q3LI63 56 aa-1.69□□□□□ -2.68
SCARNA15.2-201ENST00000516409 K7EIM0 57 aa-1.7□□□□□ -2.68
SCARNA15.2-201ENST00000516409 USP34Q70CQ2 3546 aa-1.7□□□□□ -2.68
SCARNA15.2-201ENST00000516409 LOC400499M0QZD8 3231 aa-1.71□□□□□ -2.68
SCARNA15.2-201ENST00000516409 ARHGAP5-AS1Q96IT6 56 aa-1.72□□□□□ -2.68
SCARNA15.2-201ENST00000516409 H3BUX3 64 aa-1.73□□□□□ -2.69
SCARNA15.2-201ENST00000516409 ASPMQ8IZT6 3477 aa-1.75□□□□□ -2.69
SCARNA15.2-201ENST00000516409 UNC80Q8N2C7 3258 aa-1.77□□□□□ -2.69
SCARNA15.2-201ENST00000516409 PRCDQ00LT1 54 aa-1.77□□□□□ -2.69
SCARNA15.2-201ENST00000516409 CFAP47Q6ZTR5 3102 aa-1.8□□□□□ -2.7
SCARNA15.2-201ENST00000516409 DNAH14Q0VDD8 3507 aa-1.81□□□□□ -2.7
SCARNA15.2-201ENST00000516409 LINC01556Q5JQF7 62 aa-1.88□□□□□ -2.71
SCARNA15.2-201ENST00000516409 BRCA2P51587 3418 aa-1.89□□□□□ -2.71
SCARNA15.2-201ENST00000516409 TMEM167AQ8TBQ9 72 aa-1.95□□□□□ -2.72
SCARNA15.2-201ENST00000516409 H3BSH0 61 aa-1.96□□□□□ -2.72
SCARNA15.2-201ENST00000516409 KRTAP19-2Q3LHN2 52 aa-1.96□□□□□ -2.72
SCARNA15.2-201ENST00000516409 KRTAP19-6Q3LI70 58 aa-1.99□□□□□ -2.73
SCARNA15.2-201ENST00000516409 VCANP13611 3396 aa-2.01□□□□□ -2.73
SCARNA15.2-201ENST00000516409 A0A096LPF7 62 aa-2.05□□□□□ -2.74
SCARNA15.2-201ENST00000516409 APELAP0DMC3 54 aa-2.05□□□□□ -2.74
SCARNA15.2-201ENST00000516409 CENPFP49454 3210 aa-2.06□□□□□ -2.74
SCARNA15.2-201ENST00000516409 RPL39P5Q59GN2 51 aa-2.07□□□□□ -2.74
SCARNA15.2-201ENST00000516409 DEFB108AA8MXU0 73 aa-2.13□□□□□ -2.75
SCARNA15.2-201ENST00000516409 CDH23Q9H251 3354 aa-2.14□□□□□ -2.75
SCARNA15.2-201ENST00000516409 VPS13AQ96RL7 3174 aa-2.23□□□□□ -2.77
SCARNA15.2-201ENST00000516409 UTRNP46939 3433 aa-2.32□□□□□ -2.78
SCARNA15.2-201ENST00000516409 HTN3P15516 51 aa-2.33□□□□□ -2.78
SCARNA15.2-201ENST00000516409 Q9Y3F1 56 aa-2.42□□□□□ -2.8
SCARNA15.2-201ENST00000516409 GOLGB1Q14789 3259 aaKnown RBP-2.55□□□□□ -2.82
SCARNA15.2-201ENST00000516409 DEFB108BQ8NET1 73 aa-2.61□□□□□ -2.83
SCARNA15.2-201ENST00000516409 COX14Q96I36 57 aa-2.69□□□□□ -2.84
SCARNA15.2-201ENST00000516409 STATHP02808 62 aa-2.95□□□□□ -2.88
Retrieved 77 of 20,778 RNA–protein pairs in 164.5 ms