RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 KRTAP2-3P0C7H8 128 aa0.93□□□□□ -2.26
HERC4-215ENST00000515753 MRPL34Q9BQ48 92 aaKnown RBP0.93□□□□□ -2.26
HERC4-215ENST00000515753 KRTAP2-4Q9BYR9 128 aa0.93□□□□□ -2.26
HERC4-215ENST00000515753 UQCR10Q9UDW1 63 aa0.93□□□□□ -2.26
HERC4-215ENST00000515753 USH2AO75445 5202 aa0.93□□□□□ -2.26
HERC4-215ENST00000515753 K7EQZ3 153 aa0.92□□□□□ -2.26
HERC4-215ENST00000515753 NREPQ16612 68 aa0.92□□□□□ -2.26
HERC4-215ENST00000515753 VAMP8Q9BV40 100 aa0.92□□□□□ -2.26
HERC4-215ENST00000515753 FLGP20930 4061 aaPredicted RBP0.92□□□□□ -2.26
HERC4-215ENST00000515753 CHKB-CPT1BH3BT56 60 aa0.91□□□□□ -2.26
HERC4-215ENST00000515753 NDUFC1O43677 76 aa0.91□□□□□ -2.26
HERC4-215ENST00000515753 MT-ATP8P03928 68 aa0.91□□□□□ -2.26
HERC4-215ENST00000515753 SPRR2GQ9BYE4 73 aa0.91□□□□□ -2.26
HERC4-215ENST00000515753 TRAV22A0A0B4J277 110 aa0.9□□□□□ -2.27
HERC4-215ENST00000515753 ATXN8Q156A1 80 aa0.9□□□□□ -2.27
HERC4-215ENST00000515753 KRTAP19-8Q3LI54 63 aa0.9□□□□□ -2.27
HERC4-215ENST00000515753 KRTAP2-1Q9BYU5 128 aa0.9□□□□□ -2.27
HERC4-215ENST00000515753 UQCR11O14957 56 aa0.89□□□□□ -2.27
HERC4-215ENST00000515753 PRR15LQ9BU68 103 aa0.89□□□□□ -2.27
HERC4-215ENST00000515753 TP53AIP1Q9HCN2 124 aa0.89□□□□□ -2.27
HERC4-215ENST00000515753 LINC01558Q9Y6Z2 57 aa0.89□□□□□ -2.27
HERC4-215ENST00000515753 S4R3F8 94 aa0.89□□□□□ -2.27
HERC4-215ENST00000515753 MMP24-AS1A0A0U1RRL7 71 aa0.88□□□□□ -2.27
HERC4-215ENST00000515753 ATOX1O00244 68 aa0.88□□□□□ -2.27
HERC4-215ENST00000515753 MT1BP07438 61 aa0.88□□□□□ -2.27
HERC4-215ENST00000515753 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
HERC4-215ENST00000515753 H0YAA0 97 aa0.87□□□□□ -2.27
HERC4-215ENST00000515753 SPRR2EP22531 72 aa0.87□□□□□ -2.27
HERC4-215ENST00000515753 SPRR2BP35325 72 aa0.87□□□□□ -2.27
HERC4-215ENST00000515753 SPRR2AP35326 72 aa0.87□□□□□ -2.27
HERC4-215ENST00000515753 SPRR2FQ96RM1 72 aa0.87□□□□□ -2.27
HERC4-215ENST00000515753 ACYP1P07311 99 aa0.86□□□□□ -2.27
HERC4-215ENST00000515753 KRTAP8-1Q8IUC2 63 aa0.86□□□□□ -2.27
HERC4-215ENST00000515753 SERP2Q8N6R1 65 aa0.86□□□□□ -2.27
HERC4-215ENST00000515753 UBL5Q9BZL1 73 aa0.86□□□□□ -2.27
HERC4-215ENST00000515753 SPRR2DP22532 72 aa0.85□□□□□ -2.27
HERC4-215ENST00000515753 C10orf95Q9H7T3 257 aa0.85□□□□□ -2.27
HERC4-215ENST00000515753 A0A0D9SG42 100 aa0.84□□□□□ -2.27
HERC4-215ENST00000515753 KRTAP5-10Q6L8G5 202 aa0.84□□□□□ -2.27
HERC4-215ENST00000515753 MUC12Q9UKN1 5478 aa0.84□□□□□ -2.28
HERC4-215ENST00000515753 AHNAK2Q8IVF2 5795 aa0.83□□□□□ -2.28
HERC4-215ENST00000515753 H7BZZ5 65 aa0.83□□□□□ -2.28
HERC4-215ENST00000515753 PYY3Q5JQD4 70 aa0.83□□□□□ -2.28
HERC4-215ENST00000515753 KMT2DO14686 5537 aa0.82□□□□□ -2.28
HERC4-215ENST00000515753 M0QZ58 72 aa0.81□□□□□ -2.28
HERC4-215ENST00000515753 MT1XP80297 61 aa0.81□□□□□ -2.28
HERC4-215ENST00000515753 ATP5EP2Q5VTU8 51 aa0.8□□□□□ -2.28
HERC4-215ENST00000515753 SPCS1Q9Y6A9 102 aa0.8□□□□□ -2.28
HERC4-215ENST00000515753 GPR98Q8WXG9 6306 aa0.8□□□□□ -2.28
HERC4-215ENST00000515753 H0Y9P7 68 aa0.79□□□□□ -2.28
HERC4-215ENST00000515753 DSTQ03001 7570 aaKnown RBP0.78□□□□□ -2.29
HERC4-215ENST00000515753 MDN1Q9NU22 5596 aa0.77□□□□□ -2.29
HERC4-215ENST00000515753 A0A087WVE0 104 aa0.77□□□□□ -2.29
HERC4-215ENST00000515753 K7EP34 96 aa0.76□□□□□ -2.29
HERC4-215ENST00000515753 MT1GP13640 62 aa0.76□□□□□ -2.29
HERC4-215ENST00000515753 KRTAP19-3Q7Z4W3 81 aa0.76□□□□□ -2.29
HERC4-215ENST00000515753 LINC00643Q86TS7 51 aa0.76□□□□□ -2.29
HERC4-215ENST00000515753 ETDBQ3ZM63 59 aa0.75□□□□□ -2.29
HERC4-215ENST00000515753 SPATA8Q6RVD6 105 aa0.74□□□□□ -2.29
HERC4-215ENST00000515753 MT1EP04732 61 aa0.73□□□□□ -2.29
HERC4-215ENST00000515753 MT4P47944 62 aa0.73□□□□□ -2.29
HERC4-215ENST00000515753 KRTAP19-7Q3SYF9 63 aa0.73□□□□□ -2.29
HERC4-215ENST00000515753 TNP1P09430 55 aa0.71□□□□□ -2.3
HERC4-215ENST00000515753 MUC5BQ9HC84 5762 aaPredicted RBP0.7□□□□□ -2.3
HERC4-215ENST00000515753 MT1MQ8N339 61 aa0.7□□□□□ -2.3
HERC4-215ENST00000515753 KRTAP19-5Q3LI72 72 aa0.69□□□□□ -2.3
HERC4-215ENST00000515753 MT1LQ93083 61 aa0.68□□□□□ -2.3
HERC4-215ENST00000515753 KRTAP20-2Q3LI61 65 aa0.67□□□□□ -2.3
HERC4-215ENST00000515753 A0A1B0GU69 56 aa0.66□□□□□ -2.3
HERC4-215ENST00000515753 AHNAKQ09666 5890 aaKnown RBP0.65□□□□□ -2.3
HERC4-215ENST00000515753 SYNE1Q8NF91 8797 aaKnown RBP0.61□□□□□ -2.31
HERC4-215ENST00000515753 MT1AP04731 61 aa0.61□□□□□ -2.31
HERC4-215ENST00000515753 MUC5ACP98088 5654 aa0.57□□□□□ -2.32
HERC4-215ENST00000515753 KRTAP6-1Q3LI64 71 aa0.56□□□□□ -2.32
HERC4-215ENST00000515753 KRTAP6-2Q3LI66 62 aa0.56□□□□□ -2.32
HERC4-215ENST00000515753 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
HERC4-215ENST00000515753 KRTAP21-1Q3LI58 79 aa0.44□□□□□ -2.34
HERC4-215ENST00000515753 PRM1P04553 51 aa0.29□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 36.2 ms