RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 NMES1Q9C002 83 aa0.57□□□□□ -2.32
LINC01088-211ENST00000515597 PSENENQ9NZ42 101 aa0.57□□□□□ -2.32
LINC01088-211ENST00000515597 HIGD1BQ9P298 99 aa0.57□□□□□ -2.32
LINC01088-211ENST00000515597 A0A1B0GUT8 65 aa0.56□□□□□ -2.32
LINC01088-211ENST00000515597 H0Y9P7 68 aa0.56□□□□□ -2.32
LINC01088-211ENST00000515597 NDUFB1O75438 58 aa0.56□□□□□ -2.32
LINC01088-211ENST00000515597 IGLC3P0DOY3 106 aa0.56□□□□□ -2.32
LINC01088-211ENST00000515597 SPRR1AP35321 89 aa0.56□□□□□ -2.32
LINC01088-211ENST00000515597 Q6JHZ5 121 aa0.56□□□□□ -2.32
LINC01088-211ENST00000515597 Q6ZRX8 168 aa0.56□□□□□ -2.32
LINC01088-211ENST00000515597 Q96NJ1 140 aa0.56□□□□□ -2.32
LINC01088-211ENST00000515597 A0A087WXM4 84 aa0.55□□□□□ -2.32
LINC01088-211ENST00000515597 UMAD1C9J7I0 102 aa0.55□□□□□ -2.32
LINC01088-211ENST00000515597 PHGR1C9JFL3 82 aa0.55□□□□□ -2.32
LINC01088-211ENST00000515597 PLAC4Q8WY50 150 aa0.55□□□□□ -2.32
LINC01088-211ENST00000515597 A0A1B0GU69 56 aa0.54□□□□□ -2.32
LINC01088-211ENST00000515597 SMIM13P0DJ93 91 aa0.54□□□□□ -2.32
LINC01088-211ENST00000515597 POLR2KP53803 58 aaKnown RBP0.54□□□□□ -2.32
LINC01088-211ENST00000515597 C18orf32Q8TCD1 76 aa0.54□□□□□ -2.32
LINC01088-211ENST00000515597 MT1LQ93083 61 aa0.54□□□□□ -2.32
LINC01088-211ENST00000515597 TRBV7-4A0A0J9YYF1 115 aa0.53□□□□□ -2.32
LINC01088-211ENST00000515597 H0YAA0 97 aa0.53□□□□□ -2.32
LINC01088-211ENST00000515597 IFI27P40305 119 aaPredicted RBP0.53□□□□□ -2.32
LINC01088-211ENST00000515597 RPL39P62891 51 aaKnown RBP0.53□□□□□ -2.32
LINC01088-211ENST00000515597 S100ZQ8WXG8 99 aa0.53□□□□□ -2.32
LINC01088-211ENST00000515597 SPRR1BP22528 89 aa0.52□□□□□ -2.33
LINC01088-211ENST00000515597 LINC00472Q9H8W2 130 aa0.52□□□□□ -2.33
LINC01088-211ENST00000515597 GNG13Q9P2W3 67 aa0.52□□□□□ -2.33
LINC01088-211ENST00000515597 I3L3M4 83 aa0.51□□□□□ -2.33
LINC01088-211ENST00000515597 SPINK7P58062 85 aa0.51□□□□□ -2.33
LINC01088-211ENST00000515597 KRTAP19-5Q3LI72 72 aa0.51□□□□□ -2.33
LINC01088-211ENST00000515597 SPATA8Q6RVD6 105 aa0.51□□□□□ -2.33
LINC01088-211ENST00000515597 KCNQ1DNQ9H478 68 aa0.51□□□□□ -2.33
LINC01088-211ENST00000515597 TOMM7Q9P0U1 55 aa0.51□□□□□ -2.33
LINC01088-211ENST00000515597 ATXN8Q156A1 80 aa0.5□□□□□ -2.33
LINC01088-211ENST00000515597 KRTAP6-1Q3LI64 71 aa0.5□□□□□ -2.33
LINC01088-211ENST00000515597 KRTAP6-2Q3LI66 62 aa0.5□□□□□ -2.33
LINC01088-211ENST00000515597 Q8IZM0 81 aa0.5□□□□□ -2.33
LINC01088-211ENST00000515597 CNFNQ9BYD5 112 aa0.5□□□□□ -2.33
LINC01088-211ENST00000515597 C10orf95Q9H7T3 257 aa0.5□□□□□ -2.33
LINC01088-211ENST00000515597 TP53AIP1Q9HCN2 124 aa0.5□□□□□ -2.33
LINC01088-211ENST00000515597 COX8AP10176 69 aa0.49□□□□□ -2.33
LINC01088-211ENST00000515597 COX7BP24311 80 aa0.49□□□□□ -2.33
LINC01088-211ENST00000515597 NREPQ16612 68 aa0.49□□□□□ -2.33
LINC01088-211ENST00000515597 H1FX-AS1Q4G0G2 97 aa0.49□□□□□ -2.33
LINC01088-211ENST00000515597 WFDC13Q8IUB5 93 aa0.49□□□□□ -2.33
LINC01088-211ENST00000515597 CDKN2A-AS1Q9UH64 79 aa0.49□□□□□ -2.33
LINC01088-211ENST00000515597 Q5BKY6 102 aa0.48□□□□□ -2.33
LINC01088-211ENST00000515597 UBL5Q9BZL1 73 aa0.48□□□□□ -2.33
LINC01088-211ENST00000515597 CRIPTQ9P021 101 aa0.48□□□□□ -2.33
LINC01088-211ENST00000515597 ETDCA0A1B0GVM5 59 aa0.46□□□□□ -2.34
LINC01088-211ENST00000515597 A0A0D9SG42 100 aa0.45□□□□□ -2.34
LINC01088-211ENST00000515597 K7EQZ3 153 aa0.45□□□□□ -2.34
LINC01088-211ENST00000515597 C3orf79P0CE67 100 aa0.45□□□□□ -2.34
LINC01088-211ENST00000515597 SERF2P84101 59 aa0.45□□□□□ -2.34
LINC01088-211ENST00000515597 LINC01549A6NIU2 74 aa0.44□□□□□ -2.34
LINC01088-211ENST00000515597 IGIPA6NJ69 53 aa0.44□□□□□ -2.34
LINC01088-211ENST00000515597 DEFB105AQ8NG35 78 aa0.44□□□□□ -2.34
LINC01088-211ENST00000515597 MRPL34Q9BQ48 92 aaKnown RBP0.44□□□□□ -2.34
LINC01088-211ENST00000515597 MT1AP04731 61 aa0.43□□□□□ -2.34
LINC01088-211ENST00000515597 FCER1GP30273 86 aa0.43□□□□□ -2.34
LINC01088-211ENST00000515597 TMEM167BQ9NRX6 74 aa0.43□□□□□ -2.34
LINC01088-211ENST00000515597 IGLV5-48A0A075B6I7 105 aa0.42□□□□□ -2.34
LINC01088-211ENST00000515597 K7EMI3 77 aa0.42□□□□□ -2.34
LINC01088-211ENST00000515597 KRTAP21-1Q3LI58 79 aa0.41□□□□□ -2.34
LINC01088-211ENST00000515597 SMIM2Q9BVW6 85 aa0.41□□□□□ -2.34
LINC01088-211ENST00000515597 PLNP26678 52 aa0.39□□□□□ -2.35
LINC01088-211ENST00000515597 LINC00158P58513 81 aa0.39□□□□□ -2.35
LINC01088-211ENST00000515597 TOMM5Q8N4H5 51 aa0.39□□□□□ -2.35
LINC01088-211ENST00000515597 S4R3F8 94 aa0.37□□□□□ -2.35
LINC01088-211ENST00000515597 H0YGX0 51 aa0.36□□□□□ -2.35
LINC01088-211ENST00000515597 M0QZ58 72 aa0.32□□□□□ -2.36
LINC01088-211ENST00000515597 LINC00308Q8TCZ7 52 aa0.32□□□□□ -2.36
LINC01088-211ENST00000515597 SMIM27A0A1W2PRY6 76 aa0.31□□□□□ -2.36
LINC01088-211ENST00000515597 LINC01546A6NGU7 62 aa0.31□□□□□ -2.36
LINC01088-211ENST00000515597 MMP24-AS1A0A0U1RRL7 71 aa0.27□□□□□ -2.37
LINC01088-211ENST00000515597 PRM1P04553 51 aa0.24□□□□□ -2.37
LINC01088-211ENST00000515597 TNP1P09430 55 aa0.22□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 163.5 ms