RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 SPINT4Q6UDR6 99 aa5.79□□□□□ -1.48
HMGCLL1-209ENST00000515546 LCE5AQ5TCM9 118 aa5.78□□□□□ -1.48
HMGCLL1-209ENST00000515546 CAMK2N1Q7Z7J9 78 aa5.77□□□□□ -1.49
HMGCLL1-209ENST00000515546 SPRR2DP22532 72 aa5.73□□□□□ -1.49
HMGCLL1-209ENST00000515546 CDC42SE1Q9NRR8 79 aa5.68□□□□□ -1.5
HMGCLL1-209ENST00000515546 KRTAP2-2Q9BYT5 123 aa5.66□□□□□ -1.5
HMGCLL1-209ENST00000515546 KRTAP2-1Q9BYU5 128 aa5.66□□□□□ -1.5
HMGCLL1-209ENST00000515546 KRTAP19-7Q3SYF9 63 aa5.6□□□□□ -1.51
HMGCLL1-209ENST00000515546 K7ERS5 55 aa5.57□□□□□ -1.52
HMGCLL1-209ENST00000515546 C10orf95Q9H7T3 257 aa5.57□□□□□ -1.52
HMGCLL1-209ENST00000515546 MT1EP04732 61 aa5.55□□□□□ -1.52
HMGCLL1-209ENST00000515546 KRTAP5-3Q6L8H2 238 aa5.55□□□□□ -1.52
HMGCLL1-209ENST00000515546 BRK1Q8WUW1 75 aa5.53□□□□□ -1.52
HMGCLL1-209ENST00000515546 KRTAP19-3Q7Z4W3 81 aa5.48□□□□□ -1.53
HMGCLL1-209ENST00000515546 DSTQ03001 7570 aaKnown RBP5.44□□□□□ -1.54
HMGCLL1-209ENST00000515546 KRTAP19-5Q3LI72 72 aa5.43□□□□□ -1.54
HMGCLL1-209ENST00000515546 TNP1P09430 55 aa5.38□□□□□ -1.55
HMGCLL1-209ENST00000515546 ROMO1P60602 79 aa5.35□□□□□ -1.55
HMGCLL1-209ENST00000515546 MT1GP13640 62 aa5.34□□□□□ -1.55
HMGCLL1-209ENST00000515546 KRTAP25-1Q3LHN0 102 aa5.32□□□□□ -1.56
HMGCLL1-209ENST00000515546 LCE3AQ5TA76 89 aa5.32□□□□□ -1.56
HMGCLL1-209ENST00000515546 MT1LQ93083 61 aa5.3□□□□□ -1.56
HMGCLL1-209ENST00000515546 H3BS24 57 aa5.28□□□□□ -1.56
HMGCLL1-209ENST00000515546 PP632Q6XCG6 107 aa5.28□□□□□ -1.56
HMGCLL1-209ENST00000515546 GPR98Q8WXG9 6306 aa5.28□□□□□ -1.56
HMGCLL1-209ENST00000515546 MT1MQ8N339 61 aa5.27□□□□□ -1.57
HMGCLL1-209ENST00000515546 PRO0628Q9UI54 55 aa5.24□□□□□ -1.57
HMGCLL1-209ENST00000515546 PMAIP1Q13794 54 aa5.2□□□□□ -1.58
HMGCLL1-209ENST00000515546 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
HMGCLL1-209ENST00000515546 KRTAP12-3P60328 96 aa5.12□□□□□ -1.59
HMGCLL1-209ENST00000515546 KRTAP4-3Q9BYR4 195 aa5.12□□□□□ -1.59
HMGCLL1-209ENST00000515546 HMCN1Q96RW7 5635 aa5.12□□□□□ -1.59
HMGCLL1-209ENST00000515546 KRTAP5-4Q6L8H1 288 aa5.04□□□□□ -1.6
HMGCLL1-209ENST00000515546 MT4P47944 62 aa4.99□□□□□ -1.61
HMGCLL1-209ENST00000515546 PRAC1Q96KF2 57 aa4.97□□□□□ -1.61
HMGCLL1-209ENST00000515546 AHNAK2Q8IVF2 5795 aa4.93□□□□□ -1.62
HMGCLL1-209ENST00000515546 KTN1-AS1Q86SY8 53 aa4.91□□□□□ -1.62
HMGCLL1-209ENST00000515546 KRTAP15-1Q3LI76 137 aa4.86□□□□□ -1.63
HMGCLL1-209ENST00000515546 KRTAP5-5Q701N2 237 aaPredicted RBP4.86□□□□□ -1.63
HMGCLL1-209ENST00000515546 SPRR5A0A1B0GTR4 108 aa4.72□□□□□ -1.65
HMGCLL1-209ENST00000515546 KRTAP20-2Q3LI61 65 aa4.72□□□□□ -1.65
HMGCLL1-209ENST00000515546 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
HMGCLL1-209ENST00000515546 KRTAP5-10Q6L8G5 202 aa4.72□□□□□ -1.65
HMGCLL1-209ENST00000515546 SYNE1Q8NF91 8797 aaKnown RBP4.68□□□□□ -1.66
HMGCLL1-209ENST00000515546 KRTAP12-4P60329 112 aa4.66□□□□□ -1.66
HMGCLL1-209ENST00000515546 SVIPQ8NHG7 77 aa4.62□□□□□ -1.67
HMGCLL1-209ENST00000515546 KRTAP5-7Q6L8G8 165 aa4.54□□□□□ -1.68
HMGCLL1-209ENST00000515546 MT1AP04731 61 aa4.5□□□□□ -1.69
HMGCLL1-209ENST00000515546 KRTAP9-6A8MVA2 160 aa4.49□□□□□ -1.69
HMGCLL1-209ENST00000515546 KRTAP6-1Q3LI64 71 aa4.47□□□□□ -1.69
HMGCLL1-209ENST00000515546 KRTAP5-2Q701N4 177 aa4.43□□□□□ -1.7
HMGCLL1-209ENST00000515546 KRTAP6-2Q3LI66 62 aa4.26□□□□□ -1.73
HMGCLL1-209ENST00000515546 KRTAP5-8O75690 187 aa4.16□□□□□ -1.74
HMGCLL1-209ENST00000515546 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.14□□□□□ -1.75
HMGCLL1-209ENST00000515546 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
HMGCLL1-209ENST00000515546 AHNAKQ09666 5890 aaKnown RBP4.12□□□□□ -1.75
HMGCLL1-209ENST00000515546 MT3P25713 68 aa4.1□□□□□ -1.75
HMGCLL1-209ENST00000515546 MUC5BQ9HC84 5762 aaPredicted RBP4.08□□□□□ -1.76
HMGCLL1-209ENST00000515546 MUC5ACP98088 5654 aa4.08□□□□□ -1.76
HMGCLL1-209ENST00000515546 KRTAP5-11Q6L8G4 156 aa4.01□□□□□ -1.77
HMGCLL1-209ENST00000515546 LUZP6Q538Z0 58 aa4□□□□□ -1.77
HMGCLL1-209ENST00000515546 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
HMGCLL1-209ENST00000515546 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
HMGCLL1-209ENST00000515546 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
HMGCLL1-209ENST00000515546 LCE1CQ5T751 118 aa3.52□□□□□ -1.85
HMGCLL1-209ENST00000515546 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
HMGCLL1-209ENST00000515546 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.86
HMGCLL1-209ENST00000515546 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
HMGCLL1-209ENST00000515546 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
HMGCLL1-209ENST00000515546 A0A0A0MQY5 61 aa3.15□□□□□ -1.91
HMGCLL1-209ENST00000515546 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
HMGCLL1-209ENST00000515546 INE1O15225 51 aa3.05□□□□□ -1.92
HMGCLL1-209ENST00000515546 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
HMGCLL1-209ENST00000515546 PRM1P04553 51 aa2.79□□□□□ -1.96
HMGCLL1-209ENST00000515546 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
HMGCLL1-209ENST00000515546 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
HMGCLL1-209ENST00000515546 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
HMGCLL1-209ENST00000515546 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 44.7 ms