RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 PRO1854Q9UHT4 67 aa4.06□□□□□ -1.76
SFXN1-210ENST00000513725 CASC2Q6XLA1 102 aa4.04□□□□□ -1.76
SFXN1-210ENST00000513725 MT1LQ93083 61 aa4.04□□□□□ -1.76
SFXN1-210ENST00000513725 KRTAP19-5Q3LI72 72 aa4.03□□□□□ -1.76
SFXN1-210ENST00000513725 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
SFXN1-210ENST00000513725 P0C880 135 aa4.02□□□□□ -1.77
SFXN1-210ENST00000513725 CDC42SE1Q9NRR8 79 aa3.99□□□□□ -1.77
SFXN1-210ENST00000513725 K7ERS5 55 aa3.98□□□□□ -1.77
SFXN1-210ENST00000513725 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
SFXN1-210ENST00000513725 OCR1Q9BZK8 76 aa3.96□□□□□ -1.78
SFXN1-210ENST00000513725 TRAV22A0A0B4J277 110 aa3.95□□□□□ -1.78
SFXN1-210ENST00000513725 SPTSSBQ8NFR3 76 aa3.95□□□□□ -1.78
SFXN1-210ENST00000513725 KRTAP5-2Q701N4 177 aa3.94□□□□□ -1.78
SFXN1-210ENST00000513725 LOC110117498A0A087WWA1 95 aa3.93□□□□□ -1.78
SFXN1-210ENST00000513725 CHKB-CPT1BH3BT56 60 aa3.92□□□□□ -1.78
SFXN1-210ENST00000513725 CAMK2N1Q7Z7J9 78 aa3.92□□□□□ -1.78
SFXN1-210ENST00000513725 OBSCNQ5VST9 7968 aa3.91□□□□□ -1.78
SFXN1-210ENST00000513725 LOC101927531A0A1B0GV80 90 aa3.9□□□□□ -1.79
SFXN1-210ENST00000513725 BPY2O14599 106 aa3.9□□□□□ -1.79
SFXN1-210ENST00000513725 C14orf132Q9NPU4 83 aa3.89□□□□□ -1.79
SFXN1-210ENST00000513725 JMJD7-PLA2G4BH0Y9G9 81 aa3.88□□□□□ -1.79
SFXN1-210ENST00000513725 BAALC-AS2P0C853 105 aa3.88□□□□□ -1.79
SFXN1-210ENST00000513725 Q8N9L7 120 aa3.87□□□□□ -1.79
SFXN1-210ENST00000513725 A6NED7 52 aa3.86□□□□□ -1.79
SFXN1-210ENST00000513725 ROMO1P60602 79 aa3.86□□□□□ -1.79
SFXN1-210ENST00000513725 A0A0D9SG42 100 aa3.85□□□□□ -1.79
SFXN1-210ENST00000513725 LUZP6Q538Z0 58 aa3.84□□□□□ -1.79
SFXN1-210ENST00000513725 UBL5Q9BZL1 73 aa3.84□□□□□ -1.79
SFXN1-210ENST00000513725 TP53AIP1Q9HCN2 124 aa3.8□□□□□ -1.8
SFXN1-210ENST00000513725 SNURFQ9Y675 71 aa3.8□□□□□ -1.8
SFXN1-210ENST00000513725 H3BPC8 53 aa3.78□□□□□ -1.8
SFXN1-210ENST00000513725 PRAC1Q96KF2 57 aa3.78□□□□□ -1.8
SFXN1-210ENST00000513725 MIR22HGQ0VDD5 57 aa3.76□□□□□ -1.81
SFXN1-210ENST00000513725 SPANXA2-OT1Q8N9U9 137 aa3.76□□□□□ -1.81
SFXN1-210ENST00000513725 PRR15LQ9BU68 103 aa3.75□□□□□ -1.81
SFXN1-210ENST00000513725 DMAC1Q96GE9 116 aa3.72□□□□□ -1.81
SFXN1-210ENST00000513725 LINC01558Q9Y6Z2 57 aa3.72□□□□□ -1.81
SFXN1-210ENST00000513725 LINC00208Q96KT6 92 aa3.69□□□□□ -1.82
SFXN1-210ENST00000513725 A8MU10 97 aa3.64□□□□□ -1.83
SFXN1-210ENST00000513725 H0Y9P7 68 aa3.63□□□□□ -1.83
SFXN1-210ENST00000513725 UQCR11O14957 56 aa3.63□□□□□ -1.83
SFXN1-210ENST00000513725 KRTAP5-1Q6L8H4 278 aa3.62□□□□□ -1.83
SFXN1-210ENST00000513725 C10orf95Q9H7T3 257 aa3.62□□□□□ -1.83
SFXN1-210ENST00000513725 KRTAP25-1Q3LHN0 102 aa3.6□□□□□ -1.83
SFXN1-210ENST00000513725 SPATA8Q6RVD6 105 aa3.59□□□□□ -1.83
SFXN1-210ENST00000513725 LCE3AQ5TA76 89 aa3.58□□□□□ -1.84
SFXN1-210ENST00000513725 A0A1B0GU33 70 aa3.53□□□□□ -1.84
SFXN1-210ENST00000513725 NDUFAF8A1L188 74 aa3.53□□□□□ -1.84
SFXN1-210ENST00000513725 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
SFXN1-210ENST00000513725 COA5Q86WW8 74 aa3.49□□□□□ -1.85
SFXN1-210ENST00000513725 KRTAP6-1Q3LI64 71 aa3.46□□□□□ -1.86
SFXN1-210ENST00000513725 MT3P25713 68 aa3.44□□□□□ -1.86
SFXN1-210ENST00000513725 MT1AP04731 61 aa3.42□□□□□ -1.86
SFXN1-210ENST00000513725 SPINT4Q6UDR6 99 aa3.41□□□□□ -1.86
SFXN1-210ENST00000513725 A0A1B0GU69 56 aa3.39□□□□□ -1.87
SFXN1-210ENST00000513725 KRTAP12-3P60328 96 aa3.37□□□□□ -1.87
SFXN1-210ENST00000513725 KRTAP13-4Q3LI77 160 aa3.36□□□□□ -1.87
SFXN1-210ENST00000513725 ACYP2P14621 99 aa3.29□□□□□ -1.88
SFXN1-210ENST00000513725 TNP1P09430 55 aa3.24□□□□□ -1.89
SFXN1-210ENST00000513725 INE1O15225 51 aa3.21□□□□□ -1.9
SFXN1-210ENST00000513725 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
SFXN1-210ENST00000513725 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
SFXN1-210ENST00000513725 KRTAP12-1P59990 96 aa3.08□□□□□ -1.92
SFXN1-210ENST00000513725 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
SFXN1-210ENST00000513725 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
SFXN1-210ENST00000513725 LCE3CQ5T5A8 94 aa3□□□□□ -1.93
SFXN1-210ENST00000513725 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
SFXN1-210ENST00000513725 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
SFXN1-210ENST00000513725 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.89□□□□□ -1.95
SFXN1-210ENST00000513725 KRTAP9-6A8MVA2 160 aa2.81□□□□□ -1.96
SFXN1-210ENST00000513725 LCE3EQ5T5B0 92 aa2.56□□□□□ -2
SFXN1-210ENST00000513725 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
SFXN1-210ENST00000513725 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
SFXN1-210ENST00000513725 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
SFXN1-210ENST00000513725 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
SFXN1-210ENST00000513725 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
SFXN1-210ENST00000513725 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
SFXN1-210ENST00000513725 PRM1P04553 51 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms