RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 C10orf95Q9H7T3 257 aa5.67□□□□□ -1.5
DEPDC1B-206ENST00000512452 MDN1Q9NU22 5596 aa5.66□□□□□ -1.5
DEPDC1B-206ENST00000512452 KRTAP19-8Q3LI54 63 aa5.65□□□□□ -1.5
DEPDC1B-206ENST00000512452 KRTAP5-9P26371 169 aa5.63□□□□□ -1.51
DEPDC1B-206ENST00000512452 KRTAP4-11Q9BYQ6 195 aa5.58□□□□□ -1.52
DEPDC1B-206ENST00000512452 LCE5AQ5TCM9 118 aa5.57□□□□□ -1.52
DEPDC1B-206ENST00000512452 PP632Q6XCG6 107 aa5.52□□□□□ -1.53
DEPDC1B-206ENST00000512452 MT1BP07438 61 aa5.51□□□□□ -1.53
DEPDC1B-206ENST00000512452 TNP1P09430 55 aa5.51□□□□□ -1.53
DEPDC1B-206ENST00000512452 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
DEPDC1B-206ENST00000512452 SPRR2EP22531 72 aa5.42□□□□□ -1.54
DEPDC1B-206ENST00000512452 SPRR2BP35325 72 aa5.42□□□□□ -1.54
DEPDC1B-206ENST00000512452 SPRR2AP35326 72 aa5.42□□□□□ -1.54
DEPDC1B-206ENST00000512452 KRTAP5-3Q6L8H2 238 aa5.41□□□□□ -1.54
DEPDC1B-206ENST00000512452 MT1XP80297 61 aa5.37□□□□□ -1.55
DEPDC1B-206ENST00000512452 KRTAP10-5P60370 271 aa5.36□□□□□ -1.55
DEPDC1B-206ENST00000512452 PRO2289Q9P1D8 64 aa5.36□□□□□ -1.55
DEPDC1B-206ENST00000512452 SPRR2DP22532 72 aa5.25□□□□□ -1.57
DEPDC1B-206ENST00000512452 SPRR2FQ96RM1 72 aa5.24□□□□□ -1.57
DEPDC1B-206ENST00000512452 LCE1AQ5T7P2 110 aa5.19□□□□□ -1.58
DEPDC1B-206ENST00000512452 LCE3AQ5TA76 89 aa5.18□□□□□ -1.58
DEPDC1B-206ENST00000512452 KRTAP10-12P60413 245 aa5.17□□□□□ -1.58
DEPDC1B-206ENST00000512452 KRTAP8-1Q8IUC2 63 aa5.16□□□□□ -1.58
DEPDC1B-206ENST00000512452 KRTAP15-1Q3LI76 137 aa5.15□□□□□ -1.59
DEPDC1B-206ENST00000512452 KRTAP10-7P60409 375 aaPredicted RBP5.13□□□□□ -1.59
DEPDC1B-206ENST00000512452 DSTQ03001 7570 aaKnown RBP5.1□□□□□ -1.59
DEPDC1B-206ENST00000512452 KRTAP5-10Q6L8G5 202 aa5.05□□□□□ -1.6
DEPDC1B-206ENST00000512452 SPRR5A0A1B0GTR4 108 aa5.02□□□□□ -1.61
DEPDC1B-206ENST00000512452 KRTAP5-7Q6L8G8 165 aa5.01□□□□□ -1.61
DEPDC1B-206ENST00000512452 KRTAP12-3P60328 96 aa5□□□□□ -1.61
DEPDC1B-206ENST00000512452 AHNAK2Q8IVF2 5795 aa4.98□□□□□ -1.61
DEPDC1B-206ENST00000512452 KRTAP19-5Q3LI72 72 aa4.88□□□□□ -1.63
DEPDC1B-206ENST00000512452 HMCN1Q96RW7 5635 aa4.88□□□□□ -1.63
DEPDC1B-206ENST00000512452 LUZP6Q538Z0 58 aa4.85□□□□□ -1.63
DEPDC1B-206ENST00000512452 NDUFAF8A1L188 74 aa4.78□□□□□ -1.64
DEPDC1B-206ENST00000512452 KRTAP19-7Q3SYF9 63 aa4.78□□□□□ -1.64
DEPDC1B-206ENST00000512452 MT1EP04732 61 aa4.71□□□□□ -1.66
DEPDC1B-206ENST00000512452 MT4P47944 62 aa4.69□□□□□ -1.66
DEPDC1B-206ENST00000512452 LCE3CQ5T5A8 94 aa4.69□□□□□ -1.66
DEPDC1B-206ENST00000512452 MT1LQ93083 61 aa4.64□□□□□ -1.67
DEPDC1B-206ENST00000512452 MT1GP13640 62 aa4.5□□□□□ -1.69
DEPDC1B-206ENST00000512452 KRTAP19-3Q7Z4W3 81 aa4.5□□□□□ -1.69
DEPDC1B-206ENST00000512452 AHNAKQ09666 5890 aaKnown RBP4.46□□□□□ -1.7
DEPDC1B-206ENST00000512452 MT1MQ8N339 61 aa4.42□□□□□ -1.7
DEPDC1B-206ENST00000512452 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
DEPDC1B-206ENST00000512452 A0A0A0MQY5 61 aa4.34□□□□□ -1.71
DEPDC1B-206ENST00000512452 MUC5ACP98088 5654 aa4.3□□□□□ -1.72
DEPDC1B-206ENST00000512452 KRTAP5-4Q6L8H1 288 aa4.27□□□□□ -1.73
DEPDC1B-206ENST00000512452 MUC5BQ9HC84 5762 aaPredicted RBP4.26□□□□□ -1.73
DEPDC1B-206ENST00000512452 KRTAP4-3Q9BYR4 195 aa4.25□□□□□ -1.73
DEPDC1B-206ENST00000512452 KRTAP20-2Q3LI61 65 aa4.11□□□□□ -1.75
DEPDC1B-206ENST00000512452 INE1O15225 51 aa4.06□□□□□ -1.76
DEPDC1B-206ENST00000512452 KRTAP5-8O75690 187 aa4.02□□□□□ -1.77
DEPDC1B-206ENST00000512452 MT3P25713 68 aa4□□□□□ -1.77
DEPDC1B-206ENST00000512452 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
DEPDC1B-206ENST00000512452 MT1AP04731 61 aa3.97□□□□□ -1.77
DEPDC1B-206ENST00000512452 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.97□□□□□ -1.77
DEPDC1B-206ENST00000512452 KRTAP6-1Q3LI64 71 aa3.87□□□□□ -1.79
DEPDC1B-206ENST00000512452 KRTAP12-4P60329 112 aa3.81□□□□□ -1.8
DEPDC1B-206ENST00000512452 KRTAP5-11Q6L8G4 156 aa3.79□□□□□ -1.8
DEPDC1B-206ENST00000512452 KRTAP5-2Q701N4 177 aa3.75□□□□□ -1.81
DEPDC1B-206ENST00000512452 SYNE1Q8NF91 8797 aaKnown RBP3.73□□□□□ -1.81
DEPDC1B-206ENST00000512452 LCE1EQ5T753 118 aa3.72□□□□□ -1.81
DEPDC1B-206ENST00000512452 OBSCNQ5VST9 7968 aa3.56□□□□□ -1.84
DEPDC1B-206ENST00000512452 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
DEPDC1B-206ENST00000512452 KRTAP6-2Q3LI66 62 aa3.54□□□□□ -1.84
DEPDC1B-206ENST00000512452 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
DEPDC1B-206ENST00000512452 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
DEPDC1B-206ENST00000512452 KRTAP5-1Q6L8H4 278 aa3.43□□□□□ -1.86
DEPDC1B-206ENST00000512452 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.87
DEPDC1B-206ENST00000512452 PRM1P04553 51 aa3.08□□□□□ -1.92
DEPDC1B-206ENST00000512452 PHGR1C9JFL3 82 aa3.01□□□□□ -1.93
DEPDC1B-206ENST00000512452 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
DEPDC1B-206ENST00000512452 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
DEPDC1B-206ENST00000512452 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
DEPDC1B-206ENST00000512452 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
DEPDC1B-206ENST00000512452 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
DEPDC1B-206ENST00000512452 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 7.8 ms