RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 ROMO1P60602 79 aa4.46□□□□□ -1.7
HOXA4-203ENST00000511914 CAMK2N1Q7Z7J9 78 aa4.45□□□□□ -1.7
HOXA4-203ENST00000511914 MT1BP07438 61 aa4.43□□□□□ -1.7
HOXA4-203ENST00000511914 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
HOXA4-203ENST00000511914 KTN1-AS1Q86SY8 53 aa4.42□□□□□ -1.7
HOXA4-203ENST00000511914 GPR98Q8WXG9 6306 aa4.38□□□□□ -1.71
HOXA4-203ENST00000511914 KRTAP5-9P26371 169 aa4.36□□□□□ -1.71
HOXA4-203ENST00000511914 C10orf95Q9H7T3 257 aa4.35□□□□□ -1.71
HOXA4-203ENST00000511914 KRTAP10-5P60370 271 aa4.34□□□□□ -1.71
HOXA4-203ENST00000511914 KRTAP25-1Q3LHN0 102 aa4.32□□□□□ -1.72
HOXA4-203ENST00000511914 PRO2289Q9P1D8 64 aa4.32□□□□□ -1.72
HOXA4-203ENST00000511914 KMT2DO14686 5537 aa4.3□□□□□ -1.72
HOXA4-203ENST00000511914 MT1XP80297 61 aa4.29□□□□□ -1.72
HOXA4-203ENST00000511914 MDN1Q9NU22 5596 aa4.29□□□□□ -1.72
HOXA4-203ENST00000511914 KRTAP2-3P0C7H8 128 aa4.28□□□□□ -1.72
HOXA4-203ENST00000511914 KRTAP2-4Q9BYR9 128 aa4.28□□□□□ -1.72
HOXA4-203ENST00000511914 TNP1P09430 55 aa4.27□□□□□ -1.73
HOXA4-203ENST00000511914 KRTAP5-1Q6L8H4 278 aa4.23□□□□□ -1.73
HOXA4-203ENST00000511914 PRAC1Q96KF2 57 aa4.23□□□□□ -1.73
HOXA4-203ENST00000511914 SPRR2EP22531 72 aa4.22□□□□□ -1.73
HOXA4-203ENST00000511914 SPRR2BP35325 72 aa4.22□□□□□ -1.73
HOXA4-203ENST00000511914 SPRR2AP35326 72 aa4.22□□□□□ -1.73
HOXA4-203ENST00000511914 SPRR2FQ96RM1 72 aa4.22□□□□□ -1.73
HOXA4-203ENST00000511914 PP632Q6XCG6 107 aa4.2□□□□□ -1.74
HOXA4-203ENST00000511914 KRTAP2-1Q9BYU5 128 aa4.13□□□□□ -1.75
HOXA4-203ENST00000511914 KRTAP8-1Q8IUC2 63 aa4.11□□□□□ -1.75
HOXA4-203ENST00000511914 KRTAP10-12P60413 245 aa4.1□□□□□ -1.75
HOXA4-203ENST00000511914 SPRR2DP22532 72 aa4.09□□□□□ -1.75
HOXA4-203ENST00000511914 KRTAP5-4Q6L8H1 288 aa4.09□□□□□ -1.75
HOXA4-203ENST00000511914 KRTAP4-4Q9BYR3 166 aa4.07□□□□□ -1.76
HOXA4-203ENST00000511914 LCE3AQ5TA76 89 aa4.03□□□□□ -1.76
HOXA4-203ENST00000511914 A0A0A0MQY5 61 aa4□□□□□ -1.77
HOXA4-203ENST00000511914 KRTAP12-3P60328 96 aa3.91□□□□□ -1.78
HOXA4-203ENST00000511914 MT3P25713 68 aa3.89□□□□□ -1.79
HOXA4-203ENST00000511914 DSTQ03001 7570 aaKnown RBP3.88□□□□□ -1.79
HOXA4-203ENST00000511914 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
HOXA4-203ENST00000511914 KRTAP19-5Q3LI72 72 aa3.86□□□□□ -1.79
HOXA4-203ENST00000511914 KRTAP19-7Q3SYF9 63 aa3.82□□□□□ -1.8
HOXA4-203ENST00000511914 MT1EP04732 61 aa3.76□□□□□ -1.81
HOXA4-203ENST00000511914 SPRR5A0A1B0GTR4 108 aa3.69□□□□□ -1.82
HOXA4-203ENST00000511914 MT1LQ93083 61 aa3.69□□□□□ -1.82
HOXA4-203ENST00000511914 OBSCNQ5VST9 7968 aa3.69□□□□□ -1.82
HOXA4-203ENST00000511914 LCE3CQ5T5A8 94 aa3.66□□□□□ -1.82
HOXA4-203ENST00000511914 AHNAK2Q8IVF2 5795 aa3.65□□□□□ -1.83
HOXA4-203ENST00000511914 MT1GP13640 62 aa3.64□□□□□ -1.83
HOXA4-203ENST00000511914 KRTAP19-3Q7Z4W3 81 aa3.64□□□□□ -1.83
HOXA4-203ENST00000511914 MT4P47944 62 aa3.62□□□□□ -1.83
HOXA4-203ENST00000511914 KRTAP5-10Q6L8G5 202 aa3.61□□□□□ -1.83
HOXA4-203ENST00000511914 HMCN1Q96RW7 5635 aa3.57□□□□□ -1.84
HOXA4-203ENST00000511914 KRTAP5-7Q6L8G8 165 aa3.57□□□□□ -1.84
HOXA4-203ENST00000511914 KRTAP4-3Q9BYR4 195 aa3.57□□□□□ -1.84
HOXA4-203ENST00000511914 LUZP6Q538Z0 58 aa3.56□□□□□ -1.84
HOXA4-203ENST00000511914 MT1MQ8N339 61 aa3.54□□□□□ -1.84
HOXA4-203ENST00000511914 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
HOXA4-203ENST00000511914 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
HOXA4-203ENST00000511914 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
HOXA4-203ENST00000511914 KRTAP20-2Q3LI61 65 aa3.28□□□□□ -1.88
HOXA4-203ENST00000511914 AHNAKQ09666 5890 aaKnown RBP3.28□□□□□ -1.88
HOXA4-203ENST00000511914 KRTAP5-5Q701N2 237 aaPredicted RBP3.21□□□□□ -1.9
HOXA4-203ENST00000511914 KRTAP12-4P60329 112 aa3.17□□□□□ -1.9
HOXA4-203ENST00000511914 SYNE1Q8NF91 8797 aaKnown RBP3.15□□□□□ -1.9
HOXA4-203ENST00000511914 MT1AP04731 61 aa3.15□□□□□ -1.91
HOXA4-203ENST00000511914 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
HOXA4-203ENST00000511914 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
HOXA4-203ENST00000511914 KRTAP6-1Q3LI64 71 aa3.08□□□□□ -1.92
HOXA4-203ENST00000511914 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
HOXA4-203ENST00000511914 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
HOXA4-203ENST00000511914 INE1O15225 51 aa2.9□□□□□ -1.95
HOXA4-203ENST00000511914 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
HOXA4-203ENST00000511914 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
HOXA4-203ENST00000511914 KRTAP6-2Q3LI66 62 aa2.84□□□□□ -1.95
HOXA4-203ENST00000511914 LCE3DQ9BYE3 92 aa2.75□□□□□ -1.97
HOXA4-203ENST00000511914 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
HOXA4-203ENST00000511914 PRM1P04553 51 aa2.28□□□□□ -2.04
HOXA4-203ENST00000511914 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
HOXA4-203ENST00000511914 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
HOXA4-203ENST00000511914 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
HOXA4-203ENST00000511914 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 64.3 ms