RNA–Protein interactions for RNA: ENST00000510638.1

NFKB1-209, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 628 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-209ENST00000510638 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
NFKB1-209ENST00000510638 KRTAP12-2P59991 146 aa3.65□□□□□ -1.83
NFKB1-209ENST00000510638 CDC42SE1Q9NRR8 79 aa3.64□□□□□ -1.83
NFKB1-209ENST00000510638 KRTAP10-5P60370 271 aa3.63□□□□□ -1.83
NFKB1-209ENST00000510638 MT1XP80297 61 aa3.6□□□□□ -1.83
NFKB1-209ENST00000510638 PMAIP1Q13794 54 aa3.57□□□□□ -1.84
NFKB1-209ENST00000510638 SPRR2EP22531 72 aa3.51□□□□□ -1.85
NFKB1-209ENST00000510638 SPRR2BP35325 72 aa3.51□□□□□ -1.85
NFKB1-209ENST00000510638 SPRR2AP35326 72 aa3.51□□□□□ -1.85
NFKB1-209ENST00000510638 KTN1-AS1Q86SY8 53 aa3.5□□□□□ -1.85
NFKB1-209ENST00000510638 TNP1P09430 55 aa3.47□□□□□ -1.85
NFKB1-209ENST00000510638 C10orf95Q9H7T3 257 aa3.47□□□□□ -1.85
NFKB1-209ENST00000510638 KRTAP10-7P60409 375 aaPredicted RBP3.44□□□□□ -1.86
NFKB1-209ENST00000510638 ROMO1P60602 79 aa3.44□□□□□ -1.86
NFKB1-209ENST00000510638 KRTAP10-12P60413 245 aa3.43□□□□□ -1.86
NFKB1-209ENST00000510638 KRTAP25-1Q3LHN0 102 aa3.42□□□□□ -1.86
NFKB1-209ENST00000510638 SPRR2FQ96RM1 72 aa3.42□□□□□ -1.86
NFKB1-209ENST00000510638 KRTAP15-1Q3LI76 137 aa3.41□□□□□ -1.86
NFKB1-209ENST00000510638 SPRR2DP22532 72 aa3.4□□□□□ -1.87
NFKB1-209ENST00000510638 LCE1AQ5T7P2 110 aa3.38□□□□□ -1.87
NFKB1-209ENST00000510638 KRTAP8-1Q8IUC2 63 aa3.36□□□□□ -1.87
NFKB1-209ENST00000510638 KRTAP23-1A1A580 65 aa3.31□□□□□ -1.88
NFKB1-209ENST00000510638 DSTQ03001 7570 aaKnown RBP3.3□□□□□ -1.88
NFKB1-209ENST00000510638 LCE3AQ5TA76 89 aa3.3□□□□□ -1.88
NFKB1-209ENST00000510638 PP632Q6XCG6 107 aa3.29□□□□□ -1.88
NFKB1-209ENST00000510638 PRAC1Q96KF2 57 aa3.28□□□□□ -1.88
NFKB1-209ENST00000510638 KRTAP19-5Q3LI72 72 aa3.22□□□□□ -1.89
NFKB1-209ENST00000510638 KRTAP5-10Q6L8G5 202 aa3.21□□□□□ -1.9
NFKB1-209ENST00000510638 KRTAP12-3P60328 96 aa3.2□□□□□ -1.9
NFKB1-209ENST00000510638 KRTAP19-7Q3SYF9 63 aa3.2□□□□□ -1.9
NFKB1-209ENST00000510638 KRTAP5-7Q6L8G8 165 aa3.19□□□□□ -1.9
NFKB1-209ENST00000510638 AHNAK2Q8IVF2 5795 aa3.18□□□□□ -1.9
NFKB1-209ENST00000510638 MT1EP04732 61 aa3.18□□□□□ -1.9
NFKB1-209ENST00000510638 HMCN1Q96RW7 5635 aa3.17□□□□□ -1.9
NFKB1-209ENST00000510638 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
NFKB1-209ENST00000510638 KRTAP19-3Q7Z4W3 81 aa3.1□□□□□ -1.91
NFKB1-209ENST00000510638 SPRR5A0A1B0GTR4 108 aa3.09□□□□□ -1.91
NFKB1-209ENST00000510638 MT1LQ93083 61 aa3.09□□□□□ -1.91
NFKB1-209ENST00000510638 MT1GP13640 62 aa3.07□□□□□ -1.92
NFKB1-209ENST00000510638 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
NFKB1-209ENST00000510638 MT1MQ8N339 61 aa3□□□□□ -1.93
NFKB1-209ENST00000510638 MT4P47944 62 aa2.99□□□□□ -1.93
NFKB1-209ENST00000510638 LCE3CQ5T5A8 94 aa2.97□□□□□ -1.93
NFKB1-209ENST00000510638 KRTAP4-3Q9BYR4 195 aa2.89□□□□□ -1.95
NFKB1-209ENST00000510638 AHNAKQ09666 5890 aaKnown RBP2.87□□□□□ -1.95
NFKB1-209ENST00000510638 LCE1EQ5T753 118 aa2.86□□□□□ -1.95
NFKB1-209ENST00000510638 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
NFKB1-209ENST00000510638 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
NFKB1-209ENST00000510638 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
NFKB1-209ENST00000510638 NDUFAF8A1L188 74 aa2.72□□□□□ -1.97
NFKB1-209ENST00000510638 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
NFKB1-209ENST00000510638 KRTAP5-1Q6L8H4 278 aa2.71□□□□□ -1.98
NFKB1-209ENST00000510638 KRTAP5-5Q701N2 237 aaPredicted RBP2.71□□□□□ -1.98
NFKB1-209ENST00000510638 KRTAP20-2Q3LI61 65 aa2.69□□□□□ -1.98
NFKB1-209ENST00000510638 LUZP6Q538Z0 58 aa2.69□□□□□ -1.98
NFKB1-209ENST00000510638 MT1AP04731 61 aa2.64□□□□□ -1.99
NFKB1-209ENST00000510638 KRTAP12-4P60329 112 aa2.63□□□□□ -1.99
NFKB1-209ENST00000510638 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
NFKB1-209ENST00000510638 KRTAP6-1Q3LI64 71 aa2.59□□□□□ -1.99
NFKB1-209ENST00000510638 KRTAP5-8O75690 187 aa2.56□□□□□ -2
NFKB1-209ENST00000510638 MT3P25713 68 aa2.56□□□□□ -2
NFKB1-209ENST00000510638 A0A0A0MQY5 61 aa2.49□□□□□ -2.01
NFKB1-209ENST00000510638 SYNE1Q8NF91 8797 aaKnown RBP2.43□□□□□ -2.02
NFKB1-209ENST00000510638 KRTAP5-2Q701N4 177 aa2.43□□□□□ -2.02
NFKB1-209ENST00000510638 KRTAP6-2Q3LI66 62 aa2.42□□□□□ -2.02
NFKB1-209ENST00000510638 OBSCNQ5VST9 7968 aa2.35□□□□□ -2.03
NFKB1-209ENST00000510638 INE1O15225 51 aa2.34□□□□□ -2.03
NFKB1-209ENST00000510638 LCE1FQ5T754 118 aa2.24□□□□□ -2.05
NFKB1-209ENST00000510638 LCE3DQ9BYE3 92 aa2.21□□□□□ -2.06
NFKB1-209ENST00000510638 LCE3EQ5T5B0 92 aa2.13□□□□□ -2.07
NFKB1-209ENST00000510638 LCE1BQ5T7P3 118 aa2□□□□□ -2.09
NFKB1-209ENST00000510638 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
NFKB1-209ENST00000510638 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
NFKB1-209ENST00000510638 PRM1P04553 51 aa1.76□□□□□ -2.13
NFKB1-209ENST00000510638 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
NFKB1-209ENST00000510638 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
NFKB1-209ENST00000510638 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
NFKB1-209ENST00000510638 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 82.5 ms