RNA–Protein interactions for RNA: ENST00000509507.5

CALCOCO2-215, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2 BASIC

Gene CALCOCO2, Length 1,512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-215ENST00000509507 FCGBPQ9Y6R7 5405 aaPredicted RBP3.7□□□□□ -1.82
CALCOCO2-215ENST00000509507 NEBP20929 6669 aa3.68□□□□□ -1.82
CALCOCO2-215ENST00000509507 MACF1Q9UPN3 7388 aaKnown RBP3.67□□□□□ -1.82
CALCOCO2-215ENST00000509507 KRTAP6-3Q3LI67 103 aa3.63□□□□□ -1.83
CALCOCO2-215ENST00000509507 KRTAP19-6Q3LI70 58 aa3.63□□□□□ -1.83
CALCOCO2-215ENST00000509507 KRTAP8-1Q8IUC2 63 aa3.63□□□□□ -1.83
CALCOCO2-215ENST00000509507 SPRR2GQ9BYE4 73 aa3.61□□□□□ -1.83
CALCOCO2-215ENST00000509507 LCE3AQ5TA76 89 aa3.6□□□□□ -1.83
CALCOCO2-215ENST00000509507 MT1BP07438 61 aa3.58□□□□□ -1.84
CALCOCO2-215ENST00000509507 KRTAP19-8Q3LI54 63 aa3.57□□□□□ -1.84
CALCOCO2-215ENST00000509507 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
CALCOCO2-215ENST00000509507 KRTAP10-12P60413 245 aa3.48□□□□□ -1.85
CALCOCO2-215ENST00000509507 KRTAP10-5P60370 271 aa3.47□□□□□ -1.85
CALCOCO2-215ENST00000509507 KRTAP12-3P60328 96 aa3.45□□□□□ -1.86
CALCOCO2-215ENST00000509507 KRTAP2-3P0C7H8 128 aa3.44□□□□□ -1.86
CALCOCO2-215ENST00000509507 KRTAP2-4Q9BYR9 128 aa3.44□□□□□ -1.86
CALCOCO2-215ENST00000509507 KMT2DO14686 5537 aa3.39□□□□□ -1.87
CALCOCO2-215ENST00000509507 MT1XP80297 61 aa3.39□□□□□ -1.87
CALCOCO2-215ENST00000509507 MUC12Q9UKN1 5478 aa3.37□□□□□ -1.87
CALCOCO2-215ENST00000509507 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
CALCOCO2-215ENST00000509507 MDN1Q9NU22 5596 aa3.31□□□□□ -1.88
CALCOCO2-215ENST00000509507 LCE3CQ5T5A8 94 aa3.29□□□□□ -1.88
CALCOCO2-215ENST00000509507 KRTAP2-2Q9BYT5 123 aa3.29□□□□□ -1.88
CALCOCO2-215ENST00000509507 KRTAP2-1Q9BYU5 128 aa3.29□□□□□ -1.88
CALCOCO2-215ENST00000509507 KRTAP5-9P26371 169 aa3.28□□□□□ -1.88
CALCOCO2-215ENST00000509507 KRTAP10-7P60409 375 aaPredicted RBP3.24□□□□□ -1.89
CALCOCO2-215ENST00000509507 SPRR2FQ96RM1 72 aa3.23□□□□□ -1.89
CALCOCO2-215ENST00000509507 SPRR2EP22531 72 aa3.16□□□□□ -1.9
CALCOCO2-215ENST00000509507 SPRR2BP35325 72 aa3.16□□□□□ -1.9
CALCOCO2-215ENST00000509507 SPRR2AP35326 72 aa3.16□□□□□ -1.9
CALCOCO2-215ENST00000509507 KRTAP19-5Q3LI72 72 aa3.12□□□□□ -1.91
CALCOCO2-215ENST00000509507 LCE1AQ5T7P2 110 aa3.11□□□□□ -1.91
CALCOCO2-215ENST00000509507 KRTAP9-6A8MVA2 160 aa3.09□□□□□ -1.91
CALCOCO2-215ENST00000509507 SPRR2DP22532 72 aa3.05□□□□□ -1.92
CALCOCO2-215ENST00000509507 KRTAP19-7Q3SYF9 63 aa3.01□□□□□ -1.93
CALCOCO2-215ENST00000509507 MT1EP04732 61 aa2.98□□□□□ -1.93
CALCOCO2-215ENST00000509507 MT3P25713 68 aa2.98□□□□□ -1.93
CALCOCO2-215ENST00000509507 AHNAK2Q8IVF2 5795 aa2.96□□□□□ -1.94
CALCOCO2-215ENST00000509507 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
CALCOCO2-215ENST00000509507 KRTAP19-3Q7Z4W3 81 aa2.94□□□□□ -1.94
CALCOCO2-215ENST00000509507 DSTQ03001 7570 aaKnown RBP2.94□□□□□ -1.94
CALCOCO2-215ENST00000509507 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
CALCOCO2-215ENST00000509507 KRTAP5-10Q6L8G5 202 aa2.93□□□□□ -1.94
CALCOCO2-215ENST00000509507 KRTAP12-4P60329 112 aa2.89□□□□□ -1.95
CALCOCO2-215ENST00000509507 MT1LQ93083 61 aa2.88□□□□□ -1.95
CALCOCO2-215ENST00000509507 MT1GP13640 62 aa2.86□□□□□ -1.95
CALCOCO2-215ENST00000509507 KRTAP5-4Q6L8H1 288 aa2.85□□□□□ -1.95
CALCOCO2-215ENST00000509507 MT1MQ8N339 61 aa2.84□□□□□ -1.95
CALCOCO2-215ENST00000509507 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
CALCOCO2-215ENST00000509507 KRTAP4-3Q9BYR4 195 aa2.78□□□□□ -1.96
CALCOCO2-215ENST00000509507 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.97
CALCOCO2-215ENST00000509507 MT1AP04731 61 aa2.73□□□□□ -1.97
CALCOCO2-215ENST00000509507 HMCN1Q96RW7 5635 aa2.73□□□□□ -1.97
CALCOCO2-215ENST00000509507 MT4P47944 62 aa2.68□□□□□ -1.98
CALCOCO2-215ENST00000509507 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
CALCOCO2-215ENST00000509507 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
CALCOCO2-215ENST00000509507 PRM1P04553 51 aa2.61□□□□□ -1.99
CALCOCO2-215ENST00000509507 KRTAP5-5Q701N2 237 aaPredicted RBP2.59□□□□□ -1.99
CALCOCO2-215ENST00000509507 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
CALCOCO2-215ENST00000509507 LCE1FQ5T754 118 aa2.57□□□□□ -2
CALCOCO2-215ENST00000509507 MUC5BQ9HC84 5762 aaPredicted RBP2.56□□□□□ -2
CALCOCO2-215ENST00000509507 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
CALCOCO2-215ENST00000509507 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
CALCOCO2-215ENST00000509507 KRTAP20-2Q3LI61 65 aa2.5□□□□□ -2.01
CALCOCO2-215ENST00000509507 SYNE1Q8NF91 8797 aaKnown RBP2.5□□□□□ -2.01
CALCOCO2-215ENST00000509507 KRTAP6-1Q3LI64 71 aa2.43□□□□□ -2.02
CALCOCO2-215ENST00000509507 KRTAP6-2Q3LI66 62 aa2.42□□□□□ -2.02
CALCOCO2-215ENST00000509507 LCE1EQ5T753 118 aa2.41□□□□□ -2.02
CALCOCO2-215ENST00000509507 OBSCNQ5VST9 7968 aa2.35□□□□□ -2.03
CALCOCO2-215ENST00000509507 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
CALCOCO2-215ENST00000509507 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
CALCOCO2-215ENST00000509507 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
CALCOCO2-215ENST00000509507 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
CALCOCO2-215ENST00000509507 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
CALCOCO2-215ENST00000509507 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.16
CALCOCO2-215ENST00000509507 MUC19Q7Z5P9 8384 aa1.37□□□□□ -2.19
CALCOCO2-215ENST00000509507 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 11.9 ms