RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 LEAP2Q969E1 77 aa1.03□□□□□ -2.24
UBE2D3-225ENST00000508476 KRTAP2-4Q9BYR9 128 aa1.03□□□□□ -2.24
UBE2D3-225ENST00000508476 SPRR1BP22528 89 aa1.02□□□□□ -2.25
UBE2D3-225ENST00000508476 LRP1Q07954 4544 aaKnown RBP1.01□□□□□ -2.25
UBE2D3-225ENST00000508476 DEFB4AO15263 64 aa1.01□□□□□ -2.25
UBE2D3-225ENST00000508476 KRTAP10-4P60372 401 aaPredicted RBP1.01□□□□□ -2.25
UBE2D3-225ENST00000508476 KMT2DO14686 5537 aa1□□□□□ -2.25
UBE2D3-225ENST00000508476 DNAH5Q8TE73 4624 aa1□□□□□ -2.25
UBE2D3-225ENST00000508476 K7EIM0 57 aa1□□□□□ -2.25
UBE2D3-225ENST00000508476 TMEM167AQ8TBQ9 72 aa1□□□□□ -2.25
UBE2D3-225ENST00000508476 S4R3F8 94 aa0.99□□□□□ -2.25
UBE2D3-225ENST00000508476 TNXBP22105 4242 aa0.99□□□□□ -2.25
UBE2D3-225ENST00000508476 USH2AO75445 5202 aa0.98□□□□□ -2.25
UBE2D3-225ENST00000508476 A8MTW9 85 aa0.98□□□□□ -2.25
UBE2D3-225ENST00000508476 KRTAP2-1Q9BYU5 128 aa0.98□□□□□ -2.25
UBE2D3-225ENST00000508476 KLK9Q2XQG4 91 aa0.97□□□□□ -2.25
UBE2D3-225ENST00000508476 CLPSL2Q6UWE3 100 aa0.97□□□□□ -2.25
UBE2D3-225ENST00000508476 SPART-AS1P0CW21 52 aa0.96□□□□□ -2.26
UBE2D3-225ENST00000508476 HTN3P15516 51 aa0.96□□□□□ -2.26
UBE2D3-225ENST00000508476 LPAP08519 4548 aa0.96□□□□□ -2.26
UBE2D3-225ENST00000508476 M0R2T5 61 aa0.95□□□□□ -2.26
UBE2D3-225ENST00000508476 SPINK1P00995 79 aa0.95□□□□□ -2.26
UBE2D3-225ENST00000508476 A0A0D9SG42 100 aa0.94□□□□□ -2.26
UBE2D3-225ENST00000508476 RPL39P5Q59GN2 51 aa0.94□□□□□ -2.26
UBE2D3-225ENST00000508476 MT1HP80294 61 aa0.93□□□□□ -2.26
UBE2D3-225ENST00000508476 DNAH8Q96JB1 4490 aa0.91□□□□□ -2.26
UBE2D3-225ENST00000508476 DSTQ03001 7570 aaKnown RBP0.91□□□□□ -2.26
UBE2D3-225ENST00000508476 M0QZ58 72 aa0.91□□□□□ -2.26
UBE2D3-225ENST00000508476 SPINK6Q6UWN8 80 aa0.91□□□□□ -2.26
UBE2D3-225ENST00000508476 KRTAP19-6Q3LI70 58 aa0.9□□□□□ -2.27
UBE2D3-225ENST00000508476 MUC12Q9UKN1 5478 aa0.9□□□□□ -2.27
UBE2D3-225ENST00000508476 H3BNG1 76 aa0.87□□□□□ -2.27
UBE2D3-225ENST00000508476 KRTAP19-2Q3LHN2 52 aa0.87□□□□□ -2.27
UBE2D3-225ENST00000508476 SPRR2EP22531 72 aa0.86□□□□□ -2.27
UBE2D3-225ENST00000508476 SPRR2BP35325 72 aa0.86□□□□□ -2.27
UBE2D3-225ENST00000508476 SPRR2AP35326 72 aa0.86□□□□□ -2.27
UBE2D3-225ENST00000508476 AHNAK2Q8IVF2 5795 aa0.86□□□□□ -2.27
UBE2D3-225ENST00000508476 A0A096LPF7 62 aa0.85□□□□□ -2.27
UBE2D3-225ENST00000508476 MUC17Q685J3 4493 aa0.84□□□□□ -2.27
UBE2D3-225ENST00000508476 APELAP0DMC3 54 aa0.84□□□□□ -2.27
UBE2D3-225ENST00000508476 RHPN1-AS1Q9BWJ2 59 aa0.84□□□□□ -2.27
UBE2D3-225ENST00000508476 C9orf92A6NGG3 77 aa0.83□□□□□ -2.28
UBE2D3-225ENST00000508476 TNP1P09430 55 aa0.83□□□□□ -2.28
UBE2D3-225ENST00000508476 SPRR2DP22532 72 aa0.83□□□□□ -2.28
UBE2D3-225ENST00000508476 LINC01556Q5JQF7 62 aa0.82□□□□□ -2.28
UBE2D3-225ENST00000508476 MDN1Q9NU22 5596 aa0.82□□□□□ -2.28
UBE2D3-225ENST00000508476 HTN1P15515 57 aa0.81□□□□□ -2.28
UBE2D3-225ENST00000508476 SPRR2FQ96RM1 72 aa0.8□□□□□ -2.28
UBE2D3-225ENST00000508476 MT2AP02795 61 aa0.79□□□□□ -2.28
UBE2D3-225ENST00000508476 AHNAKQ09666 5890 aaKnown RBP0.79□□□□□ -2.28
UBE2D3-225ENST00000508476 MT1FP04733 61 aa0.78□□□□□ -2.28
UBE2D3-225ENST00000508476 DEFB1P60022 68 aa0.76□□□□□ -2.29
UBE2D3-225ENST00000508476 A0A096LNI7 61 aa0.75□□□□□ -2.29
UBE2D3-225ENST00000508476 MT4P47944 62 aa0.75□□□□□ -2.29
UBE2D3-225ENST00000508476 MUC5BQ9HC84 5762 aaPredicted RBP0.74□□□□□ -2.29
UBE2D3-225ENST00000508476 FLGP20930 4061 aaPredicted RBP0.73□□□□□ -2.29
UBE2D3-225ENST00000508476 KRTAP8-1Q8IUC2 63 aa0.71□□□□□ -2.3
UBE2D3-225ENST00000508476 MUC5ACP98088 5654 aa0.71□□□□□ -2.3
UBE2D3-225ENST00000508476 RPS29P62273 56 aaKnown RBP0.68□□□□□ -2.3
UBE2D3-225ENST00000508476 PRM1P04553 51 aa0.64□□□□□ -2.31
UBE2D3-225ENST00000508476 MT1BP07438 61 aa0.64□□□□□ -2.31
UBE2D3-225ENST00000508476 KRTAP19-8Q3LI54 63 aa0.61□□□□□ -2.31
UBE2D3-225ENST00000508476 KRTAP20-2Q3LI61 65 aa0.61□□□□□ -2.31
UBE2D3-225ENST00000508476 KRTAP19-3Q7Z4W3 81 aa0.59□□□□□ -2.31
UBE2D3-225ENST00000508476 SPRR2GQ9BYE4 73 aa0.57□□□□□ -2.32
UBE2D3-225ENST00000508476 MT1AP04731 61 aa0.56□□□□□ -2.32
UBE2D3-225ENST00000508476 MT1GP13640 62 aa0.54□□□□□ -2.32
UBE2D3-225ENST00000508476 MT1XP80297 61 aa0.54□□□□□ -2.32
UBE2D3-225ENST00000508476 SYNE1Q8NF91 8797 aaKnown RBP0.54□□□□□ -2.32
UBE2D3-225ENST00000508476 PHGR1C9JFL3 82 aa0.53□□□□□ -2.32
UBE2D3-225ENST00000508476 KRTAP19-5Q3LI72 72 aa0.5□□□□□ -2.33
UBE2D3-225ENST00000508476 MT1EP04732 61 aa0.49□□□□□ -2.33
UBE2D3-225ENST00000508476 MT1MQ8N339 61 aa0.49□□□□□ -2.33
UBE2D3-225ENST00000508476 KRTAP21-1Q3LI58 79 aa0.48□□□□□ -2.33
UBE2D3-225ENST00000508476 KRTAP6-2Q3LI66 62 aa0.48□□□□□ -2.33
UBE2D3-225ENST00000508476 KRTAP19-7Q3SYF9 63 aa0.48□□□□□ -2.33
UBE2D3-225ENST00000508476 MT1LQ93083 61 aa0.43□□□□□ -2.34
UBE2D3-225ENST00000508476 KRTAP6-1Q3LI64 71 aa0.37□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms