RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 NEBP20929 6669 aa4.1□□□□□ -1.75
DDX41-203ENST00000504781 SVIPQ8NHG7 77 aa4.1□□□□□ -1.75
DDX41-203ENST00000504781 PP632Q6XCG6 107 aa4.07□□□□□ -1.76
DDX41-203ENST00000504781 PRAC1Q96KF2 57 aa4.07□□□□□ -1.76
DDX41-203ENST00000504781 MUC12Q9UKN1 5478 aa4.01□□□□□ -1.77
DDX41-203ENST00000504781 KRTAP10-12P60413 245 aa4.01□□□□□ -1.77
DDX41-203ENST00000504781 KRTAP10-7P60409 375 aaPredicted RBP3.99□□□□□ -1.77
DDX41-203ENST00000504781 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
DDX41-203ENST00000504781 KRTAP5-9P26371 169 aa3.93□□□□□ -1.78
DDX41-203ENST00000504781 LCE3AQ5TA76 89 aa3.92□□□□□ -1.78
DDX41-203ENST00000504781 KRTAP8-1Q8IUC2 63 aa3.91□□□□□ -1.78
DDX41-203ENST00000504781 KMT2DO14686 5537 aa3.9□□□□□ -1.79
DDX41-203ENST00000504781 MDN1Q9NU22 5596 aa3.89□□□□□ -1.79
DDX41-203ENST00000504781 SPRR2FQ96RM1 72 aa3.86□□□□□ -1.79
DDX41-203ENST00000504781 SPRR2EP22531 72 aa3.83□□□□□ -1.8
DDX41-203ENST00000504781 SPRR2BP35325 72 aa3.83□□□□□ -1.8
DDX41-203ENST00000504781 SPRR2AP35326 72 aa3.83□□□□□ -1.8
DDX41-203ENST00000504781 KRTAP2-3P0C7H8 128 aa3.82□□□□□ -1.8
DDX41-203ENST00000504781 KRTAP2-4Q9BYR9 128 aa3.82□□□□□ -1.8
DDX41-203ENST00000504781 KRTAP12-3P60328 96 aa3.81□□□□□ -1.8
DDX41-203ENST00000504781 KRTAP19-5Q3LI72 72 aa3.77□□□□□ -1.81
DDX41-203ENST00000504781 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
DDX41-203ENST00000504781 KRTAP19-7Q3SYF9 63 aa3.74□□□□□ -1.81
DDX41-203ENST00000504781 LCE1AQ5T7P2 110 aa3.72□□□□□ -1.81
DDX41-203ENST00000504781 SPRR2DP22532 72 aa3.7□□□□□ -1.82
DDX41-203ENST00000504781 KRTAP2-2Q9BYT5 123 aa3.69□□□□□ -1.82
DDX41-203ENST00000504781 KRTAP2-1Q9BYU5 128 aa3.69□□□□□ -1.82
DDX41-203ENST00000504781 MT1EP04732 61 aa3.67□□□□□ -1.82
DDX41-203ENST00000504781 MT1LQ93083 61 aa3.6□□□□□ -1.83
DDX41-203ENST00000504781 MT1GP13640 62 aa3.58□□□□□ -1.84
DDX41-203ENST00000504781 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
DDX41-203ENST00000504781 KRTAP19-3Q7Z4W3 81 aa3.56□□□□□ -1.84
DDX41-203ENST00000504781 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
DDX41-203ENST00000504781 MT1MQ8N339 61 aa3.46□□□□□ -1.86
DDX41-203ENST00000504781 LUZP6Q538Z0 58 aa3.44□□□□□ -1.86
DDX41-203ENST00000504781 DSTQ03001 7570 aaKnown RBP3.44□□□□□ -1.86
DDX41-203ENST00000504781 GPR98Q8WXG9 6306 aa3.41□□□□□ -1.86
DDX41-203ENST00000504781 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.87
DDX41-203ENST00000504781 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
DDX41-203ENST00000504781 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
DDX41-203ENST00000504781 MT4P47944 62 aa3.27□□□□□ -1.89
DDX41-203ENST00000504781 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
DDX41-203ENST00000504781 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
DDX41-203ENST00000504781 HMCN1Q96RW7 5635 aa3.18□□□□□ -1.9
DDX41-203ENST00000504781 A0A0A0MQY5 61 aa3.17□□□□□ -1.9
DDX41-203ENST00000504781 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
DDX41-203ENST00000504781 KRTAP5-4Q6L8H1 288 aa3.12□□□□□ -1.91
DDX41-203ENST00000504781 AHNAK2Q8IVF2 5795 aa3.11□□□□□ -1.91
DDX41-203ENST00000504781 MT1AP04731 61 aa3.08□□□□□ -1.92
DDX41-203ENST00000504781 KRTAP5-10Q6L8G5 202 aa3.06□□□□□ -1.92
DDX41-203ENST00000504781 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
DDX41-203ENST00000504781 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
DDX41-203ENST00000504781 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
DDX41-203ENST00000504781 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.94
DDX41-203ENST00000504781 SYNE1Q8NF91 8797 aaKnown RBP2.93□□□□□ -1.94
DDX41-203ENST00000504781 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
DDX41-203ENST00000504781 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
DDX41-203ENST00000504781 MT3P25713 68 aa2.82□□□□□ -1.96
DDX41-203ENST00000504781 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
DDX41-203ENST00000504781 INE1O15225 51 aa2.78□□□□□ -1.96
DDX41-203ENST00000504781 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
DDX41-203ENST00000504781 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
DDX41-203ENST00000504781 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
DDX41-203ENST00000504781 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
DDX41-203ENST00000504781 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
DDX41-203ENST00000504781 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
DDX41-203ENST00000504781 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
DDX41-203ENST00000504781 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
DDX41-203ENST00000504781 MUC5ACP98088 5654 aa2.56□□□□□ -2
DDX41-203ENST00000504781 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
DDX41-203ENST00000504781 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
DDX41-203ENST00000504781 PRM1P04553 51 aa2.21□□□□□ -2.06
DDX41-203ENST00000504781 LCE1FQ5T754 118 aa2.21□□□□□ -2.06
DDX41-203ENST00000504781 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
DDX41-203ENST00000504781 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
DDX41-203ENST00000504781 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.15
DDX41-203ENST00000504781 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
DDX41-203ENST00000504781 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 90.7 ms