RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 KRTAP12-2P59991 146 aa6.65□□□□□ -1.35
SCLT1-204ENST00000503215 KRTAP2-4Q9BYR9 128 aa6.65□□□□□ -1.35
SCLT1-204ENST00000503215 LCE1AQ5T7P2 110 aa6.6□□□□□ -1.35
SCLT1-204ENST00000503215 KRTAP10-7P60409 375 aaPredicted RBP6.56□□□□□ -1.36
SCLT1-204ENST00000503215 LCE5AQ5TCM9 118 aa6.53□□□□□ -1.36
SCLT1-204ENST00000503215 KRTAP4-2Q9BYR5 136 aa6.5□□□□□ -1.37
SCLT1-204ENST00000503215 KRTAP4-11Q9BYQ6 195 aa6.49□□□□□ -1.37
SCLT1-204ENST00000503215 KRTAP10-12P60413 245 aa6.48□□□□□ -1.37
SCLT1-204ENST00000503215 SPRR2DP22532 72 aa6.44□□□□□ -1.38
SCLT1-204ENST00000503215 KRTAP2-2Q9BYT5 123 aa6.44□□□□□ -1.38
SCLT1-204ENST00000503215 KRTAP2-1Q9BYU5 128 aa6.44□□□□□ -1.38
SCLT1-204ENST00000503215 SPINT4Q6UDR6 99 aa6.43□□□□□ -1.38
SCLT1-204ENST00000503215 KRTAP15-1Q3LI76 137 aa6.37□□□□□ -1.39
SCLT1-204ENST00000503215 KRTAP13-4Q3LI77 160 aa6.34□□□□□ -1.39
SCLT1-204ENST00000503215 A0A0D9SG42 100 aa6.28□□□□□ -1.4
SCLT1-204ENST00000503215 KRTAP12-1P59990 96 aa6.24□□□□□ -1.41
SCLT1-204ENST00000503215 NDUFAF8A1L188 74 aa6.19□□□□□ -1.42
SCLT1-204ENST00000503215 CAMK2N1Q7Z7J9 78 aa6.18□□□□□ -1.42
SCLT1-204ENST00000503215 C10orf95Q9H7T3 257 aa6.17□□□□□ -1.42
SCLT1-204ENST00000503215 KRTAP19-7Q3SYF9 63 aa6.14□□□□□ -1.43
SCLT1-204ENST00000503215 KRTAP23-1A1A580 65 aa6.07□□□□□ -1.44
SCLT1-204ENST00000503215 MT1EP04732 61 aa6.07□□□□□ -1.44
SCLT1-204ENST00000503215 PP632Q6XCG6 107 aa6.02□□□□□ -1.45
SCLT1-204ENST00000503215 KRTAP19-3Q7Z4W3 81 aa6.02□□□□□ -1.45
SCLT1-204ENST00000503215 DSTQ03001 7570 aaKnown RBP6□□□□□ -1.45
SCLT1-204ENST00000503215 KRTAP19-5Q3LI72 72 aa5.95□□□□□ -1.46
SCLT1-204ENST00000503215 GPR98Q8WXG9 6306 aa5.86□□□□□ -1.47
SCLT1-204ENST00000503215 MT1GP13640 62 aa5.85□□□□□ -1.47
SCLT1-204ENST00000503215 LUZP6Q538Z0 58 aa5.85□□□□□ -1.47
SCLT1-204ENST00000503215 A0A0A0MQY5 61 aa5.81□□□□□ -1.48
SCLT1-204ENST00000503215 MT1MQ8N339 61 aa5.79□□□□□ -1.48
SCLT1-204ENST00000503215 MT1LQ93083 61 aa5.79□□□□□ -1.48
SCLT1-204ENST00000503215 LCE3AQ5TA76 89 aa5.75□□□□□ -1.49
SCLT1-204ENST00000503215 KRTAP4-3Q9BYR4 195 aa5.74□□□□□ -1.49
SCLT1-204ENST00000503215 MT4P47944 62 aa5.68□□□□□ -1.5
SCLT1-204ENST00000503215 TNP1P09430 55 aa5.66□□□□□ -1.5
SCLT1-204ENST00000503215 SPRR5A0A1B0GTR4 108 aa5.62□□□□□ -1.51
SCLT1-204ENST00000503215 HMCN1Q96RW7 5635 aa5.62□□□□□ -1.51
SCLT1-204ENST00000503215 KRTAP5-3Q6L8H2 238 aa5.6□□□□□ -1.51
SCLT1-204ENST00000503215 KRTAP5-4Q6L8H1 288 aa5.58□□□□□ -1.52
SCLT1-204ENST00000503215 KRTAP12-3P60328 96 aa5.5□□□□□ -1.53
SCLT1-204ENST00000503215 AHNAK2Q8IVF2 5795 aa5.49□□□□□ -1.53
SCLT1-204ENST00000503215 KRTAP5-10Q6L8G5 202 aa5.4□□□□□ -1.55
SCLT1-204ENST00000503215 INE1O15225 51 aa5.32□□□□□ -1.56
SCLT1-204ENST00000503215 KRTAP5-5Q701N2 237 aaPredicted RBP5.32□□□□□ -1.56
SCLT1-204ENST00000503215 KRTAP20-2Q3LI61 65 aa5.28□□□□□ -1.56
SCLT1-204ENST00000503215 KRTAP5-7Q6L8G8 165 aa5.18□□□□□ -1.58
SCLT1-204ENST00000503215 KRTAP12-4P60329 112 aa5.16□□□□□ -1.58
SCLT1-204ENST00000503215 SYNE1Q8NF91 8797 aaKnown RBP5.13□□□□□ -1.59
SCLT1-204ENST00000503215 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
SCLT1-204ENST00000503215 KRTAP6-1Q3LI64 71 aa4.92□□□□□ -1.62
SCLT1-204ENST00000503215 MT1AP04731 61 aa4.9□□□□□ -1.63
SCLT1-204ENST00000503215 KRTAP5-2Q701N4 177 aa4.87□□□□□ -1.63
SCLT1-204ENST00000503215 KRTAP9-6A8MVA2 160 aa4.85□□□□□ -1.63
SCLT1-204ENST00000503215 KRTAP6-2Q3LI66 62 aa4.72□□□□□ -1.65
SCLT1-204ENST00000503215 KRTAP5-8O75690 187 aa4.7□□□□□ -1.66
SCLT1-204ENST00000503215 OBSCNQ5VST9 7968 aa4.58□□□□□ -1.68
SCLT1-204ENST00000503215 AHNAKQ09666 5890 aaKnown RBP4.52□□□□□ -1.69
SCLT1-204ENST00000503215 MUC5ACP98088 5654 aa4.51□□□□□ -1.69
SCLT1-204ENST00000503215 MUC5BQ9HC84 5762 aaPredicted RBP4.49□□□□□ -1.69
SCLT1-204ENST00000503215 MT3P25713 68 aa4.46□□□□□ -1.7
SCLT1-204ENST00000503215 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.7
SCLT1-204ENST00000503215 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.71
SCLT1-204ENST00000503215 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
SCLT1-204ENST00000503215 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.3□□□□□ -1.72
SCLT1-204ENST00000503215 LCE1FQ5T754 118 aa4.09□□□□□ -1.75
SCLT1-204ENST00000503215 LCE1BQ5T7P3 118 aa3.95□□□□□ -1.78
SCLT1-204ENST00000503215 LCE1CQ5T751 118 aa3.83□□□□□ -1.8
SCLT1-204ENST00000503215 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.82
SCLT1-204ENST00000503215 LCE3DQ9BYE3 92 aa3.63□□□□□ -1.83
SCLT1-204ENST00000503215 KRTAP4-4Q9BYR3 166 aa3.57□□□□□ -1.84
SCLT1-204ENST00000503215 PRM1P04553 51 aa3.49□□□□□ -1.85
SCLT1-204ENST00000503215 KRTAP21-2Q3LI59 83 aa3.24□□□□□ -1.89
SCLT1-204ENST00000503215 PHGR1C9JFL3 82 aa3.13□□□□□ -1.91
SCLT1-204ENST00000503215 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
SCLT1-204ENST00000503215 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
SCLT1-204ENST00000503215 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 7.1 ms