RNA–Protein interactions for RNA: ENST00000496925.5

PSMD2-220, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 2

Gene PSMD2, Length 723 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-220	ENST00000496925	GPR98	Q8WXG9	6306 aa		3.88	□□□□□ -1.79
PSMD2-220	ENST00000496925	CAMK2N1	Q7Z7J9	78 aa		3.87	□□□□□ -1.79
PSMD2-220	ENST00000496925	ROMO1	P60602	79 aa		3.86	□□□□□ -1.79
PSMD2-220	ENST00000496925	KRTAP13-4	Q3LI77	160 aa		3.85	□□□□□ -1.79
PSMD2-220	ENST00000496925	KRTAP19-7	Q3SYF9	63 aa		3.82	□□□□□ -1.8
PSMD2-220	ENST00000496925	MT1E	P04732	61 aa		3.81	□□□□□ -1.8
PSMD2-220	ENST00000496925	LCE5A	Q5TCM9	118 aa		3.81	□□□□□ -1.8
PSMD2-220	ENST00000496925	KRTAP4-12	Q9BQ66	201 aa		3.81	□□□□□ -1.8
PSMD2-220	ENST00000496925		A0A0D9SG42	100 aa		3.79	□□□□□ -1.8
PSMD2-220	ENST00000496925	KRTAP19-3	Q7Z4W3	81 aa		3.79	□□□□□ -1.8
PSMD2-220	ENST00000496925	DST	Q03001	7570 aa	Known RBP	3.79	□□□□□ -1.8
PSMD2-220	ENST00000496925		H3BS24	57 aa		3.77	□□□□□ -1.81
PSMD2-220	ENST00000496925	LCE1D	Q5T752	114 aa		3.75	□□□□□ -1.81
PSMD2-220	ENST00000496925	MT4	P47944	62 aa		3.74	□□□□□ -1.81
PSMD2-220	ENST00000496925	KRTAP19-5	Q3LI72	72 aa		3.74	□□□□□ -1.81
PSMD2-220	ENST00000496925	KRTAP9-9	Q9BYP9	154 aa		3.74	□□□□□ -1.81
PSMD2-220	ENST00000496925	KRTAP9-4	Q9BYQ2	154 aa		3.74	□□□□□ -1.81
PSMD2-220	ENST00000496925	SPINT4	Q6UDR6	99 aa		3.73	□□□□□ -1.81
PSMD2-220	ENST00000496925	MT1G	P13640	62 aa		3.68	□□□□□ -1.82
PSMD2-220	ENST00000496925	KRTAP4-3	Q9BYR4	195 aa		3.66	□□□□□ -1.82
PSMD2-220	ENST00000496925	LCE4A	Q5TA78	99 aa		3.64	□□□□□ -1.83
PSMD2-220	ENST00000496925	PP632	Q6XCG6	107 aa		3.64	□□□□□ -1.83
PSMD2-220	ENST00000496925	MT1M	Q8N339	61 aa		3.64	□□□□□ -1.83
PSMD2-220	ENST00000496925	HMCN1	Q96RW7	5635 aa		3.62	□□□□□ -1.83
PSMD2-220	ENST00000496925	KRTAP12-1	P59990	96 aa		3.61	□□□□□ -1.83
PSMD2-220	ENST00000496925	KRTAP15-1	Q3LI76	137 aa		3.61	□□□□□ -1.83
PSMD2-220	ENST00000496925	MT1L	Q93083	61 aa		3.61	□□□□□ -1.83
PSMD2-220	ENST00000496925	AHNAK2	Q8IVF2	5795 aa		3.56	□□□□□ -1.84
PSMD2-220	ENST00000496925	LCE3A	Q5TA76	89 aa		3.56	□□□□□ -1.84
PSMD2-220	ENST00000496925	KRTAP4-7	Q9BYR0	210 aa		3.56	□□□□□ -1.84
PSMD2-220	ENST00000496925	C10orf95	Q9H7T3	257 aa		3.56	□□□□□ -1.84
PSMD2-220	ENST00000496925	KRTAP5-10	Q6L8G5	202 aa		3.52	□□□□□ -1.85
PSMD2-220	ENST00000496925	KRTAP5-4	Q6L8H1	288 aa		3.51	□□□□□ -1.85
PSMD2-220	ENST00000496925	TNP1	P09430	55 aa		3.48	□□□□□ -1.85
PSMD2-220	ENST00000496925	KRTAP23-1	A1A580	65 aa		3.47	□□□□□ -1.85
PSMD2-220	ENST00000496925	NDUFAF8	A1L188	74 aa		3.46	□□□□□ -1.86
PSMD2-220	ENST00000496925	KRTAP4-2	Q9BYR5	136 aa		3.43	□□□□□ -1.86
PSMD2-220	ENST00000496925	KRTAP5-3	Q6L8H2	238 aa		3.42	□□□□□ -1.86
PSMD2-220	ENST00000496925	KRTAP5-7	Q6L8G8	165 aa		3.4	□□□□□ -1.87
PSMD2-220	ENST00000496925	KRTAP12-3	P60328	96 aa		3.39	□□□□□ -1.87
PSMD2-220	ENST00000496925	SPRR5	A0A1B0GTR4	108 aa		3.38	□□□□□ -1.87
PSMD2-220	ENST00000496925	KRTAP20-2	Q3LI61	65 aa		3.38	□□□□□ -1.87
PSMD2-220	ENST00000496925	LUZP6	Q538Z0	58 aa		3.36	□□□□□ -1.87
PSMD2-220	ENST00000496925	KRTAP12-4	P60329	112 aa		3.31	□□□□□ -1.88
PSMD2-220	ENST00000496925	KRTAP4-11	Q9BYQ6	195 aa		3.31	□□□□□ -1.88
PSMD2-220	ENST00000496925		A0A0A0MQY5	61 aa		3.3	□□□□□ -1.88
PSMD2-220	ENST00000496925	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.3	□□□□□ -1.88
PSMD2-220	ENST00000496925	SYNE1	Q8NF91	8797 aa	Known RBP	3.19	□□□□□ -1.9
PSMD2-220	ENST00000496925	KRTAP19-4	Q3LI73	84 aa		3.1	□□□□□ -1.91
PSMD2-220	ENST00000496925	LCE3C	Q5T5A8	94 aa		3.1	□□□□□ -1.91
PSMD2-220	ENST00000496925	KRTAP6-1	Q3LI64	71 aa		3.09	□□□□□ -1.91
PSMD2-220	ENST00000496925	INE1	O15225	51 aa		3.05	□□□□□ -1.92
PSMD2-220	ENST00000496925	MT1A	P04731	61 aa		3.05	□□□□□ -1.92
PSMD2-220	ENST00000496925	KRTAP5-2	Q701N4	177 aa		3.04	□□□□□ -1.92
PSMD2-220	ENST00000496925	KRTAP5-8	O75690	187 aa		3.03	□□□□□ -1.92
PSMD2-220	ENST00000496925	KRTAP6-2	Q3LI66	62 aa		3	□□□□□ -1.93
PSMD2-220	ENST00000496925	AHNAK	Q09666	5890 aa	Known RBP	2.98	□□□□□ -1.93
PSMD2-220	ENST00000496925	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.96	□□□□□ -1.94
PSMD2-220	ENST00000496925	KRTAP9-6	A8MVA2	160 aa		2.95	□□□□□ -1.94
PSMD2-220	ENST00000496925	MUC5AC	P98088	5654 aa		2.92	□□□□□ -1.94
PSMD2-220	ENST00000496925	OBSCN	Q5VST9	7968 aa		2.85	□□□□□ -1.95
PSMD2-220	ENST00000496925	MT3	P25713	68 aa		2.81	□□□□□ -1.96
PSMD2-220	ENST00000496925	KRTAP5-1	Q6L8H4	278 aa		2.78	□□□□□ -1.96
PSMD2-220	ENST00000496925	LCE1B	Q5T7P3	118 aa		2.58	□□□□□ -2
PSMD2-220	ENST00000496925	LCE1E	Q5T753	118 aa		2.55	□□□□□ -2
PSMD2-220	ENST00000496925	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.42	□□□□□ -2.02
PSMD2-220	ENST00000496925	LCE1C	Q5T751	118 aa		2.38	□□□□□ -2.03
PSMD2-220	ENST00000496925	KRTAP5-11	Q6L8G4	156 aa		2.27	□□□□□ -2.05
PSMD2-220	ENST00000496925	LCE3D	Q9BYE3	92 aa		2.2	□□□□□ -2.06
PSMD2-220	ENST00000496925	LCE3E	Q5T5B0	92 aa		2.14	□□□□□ -2.07
PSMD2-220	ENST00000496925	LCE1F	Q5T754	118 aa		2.13	□□□□□ -2.07
PSMD2-220	ENST00000496925	PHGR1	C9JFL3	82 aa		2.11	□□□□□ -2.07
PSMD2-220	ENST00000496925	KRTAP4-4	Q9BYR3	166 aa		2.02	□□□□□ -2.09
PSMD2-220	ENST00000496925	KRTAP21-2	Q3LI59	83 aa		2	□□□□□ -2.09
PSMD2-220	ENST00000496925	PRM1	P04553	51 aa		1.97	□□□□□ -2.09
PSMD2-220	ENST00000496925	MUC19	Q7Z5P9	8384 aa		1.75	□□□□□ -2.13
PSMD2-220	ENST00000496925	KRTAP21-1	Q3LI58	79 aa		1.56	□□□□□ -2.16
PSMD2-220	ENST00000496925	MUC16	Q8WXI7	14507 aa		1.26	□□□□□ -2.21

Retrieved 78 of 20,778 RNA–protein pairs in 82.2 ms