RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 MDN1Q9NU22 5596 aa4.73□□□□□ -1.65
RNF220-217ENST00000496262 A0A0A0MQY5 61 aa4.68□□□□□ -1.66
RNF220-217ENST00000496262 NDUFAF8A1L188 74 aa4.68□□□□□ -1.66
RNF220-217ENST00000496262 R4GN34 69 aa4.68□□□□□ -1.66
RNF220-217ENST00000496262 SPRR2FQ96RM1 72 aa4.63□□□□□ -1.67
RNF220-217ENST00000496262 SPRR2EP22531 72 aa4.59□□□□□ -1.67
RNF220-217ENST00000496262 SPRR2BP35325 72 aa4.59□□□□□ -1.67
RNF220-217ENST00000496262 SPRR2AP35326 72 aa4.59□□□□□ -1.67
RNF220-217ENST00000496262 PRO2289Q9P1D8 64 aa4.59□□□□□ -1.67
RNF220-217ENST00000496262 MT1XP80297 61 aa4.58□□□□□ -1.68
RNF220-217ENST00000496262 KRTAP2-3P0C7H8 128 aa4.57□□□□□ -1.68
RNF220-217ENST00000496262 KRTAP5-3Q6L8H2 238 aa4.57□□□□□ -1.68
RNF220-217ENST00000496262 PLAC4Q8WY50 150 aa4.57□□□□□ -1.68
RNF220-217ENST00000496262 KRTAP2-4Q9BYR9 128 aa4.57□□□□□ -1.68
RNF220-217ENST00000496262 KRTAP8-1Q8IUC2 63 aa4.55□□□□□ -1.68
RNF220-217ENST00000496262 PP632Q6XCG6 107 aa4.52□□□□□ -1.69
RNF220-217ENST00000496262 CAMK2N1Q7Z7J9 78 aa4.48□□□□□ -1.69
RNF220-217ENST00000496262 LCE1AQ5T7P2 110 aa4.47□□□□□ -1.69
RNF220-217ENST00000496262 SPRR2DP22532 72 aa4.44□□□□□ -1.7
RNF220-217ENST00000496262 KRTAP2-2Q9BYT5 123 aa4.42□□□□□ -1.7
RNF220-217ENST00000496262 KRTAP2-1Q9BYU5 128 aa4.42□□□□□ -1.7
RNF220-217ENST00000496262 KRTAP10-7P60409 375 aaPredicted RBP4.38□□□□□ -1.71
RNF220-217ENST00000496262 LUZP6Q538Z0 58 aa4.37□□□□□ -1.71
RNF220-217ENST00000496262 KRTAP23-1A1A580 65 aa4.36□□□□□ -1.71
RNF220-217ENST00000496262 TNP1P09430 55 aa4.34□□□□□ -1.71
RNF220-217ENST00000496262 KRTAP10-12P60413 245 aa4.32□□□□□ -1.72
RNF220-217ENST00000496262 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
RNF220-217ENST00000496262 GPR98Q8WXG9 6306 aa4.11□□□□□ -1.75
RNF220-217ENST00000496262 DSTQ03001 7570 aaKnown RBP4.09□□□□□ -1.75
RNF220-217ENST00000496262 KRTAP19-7Q3SYF9 63 aa4.08□□□□□ -1.76
RNF220-217ENST00000496262 LCE3AQ5TA76 89 aa4.07□□□□□ -1.76
RNF220-217ENST00000496262 MT1EP04732 61 aa4.06□□□□□ -1.76
RNF220-217ENST00000496262 KRTAP19-3Q7Z4W3 81 aa4.05□□□□□ -1.76
RNF220-217ENST00000496262 KRTAP19-5Q3LI72 72 aa3.97□□□□□ -1.77
RNF220-217ENST00000496262 MT1GP13640 62 aa3.93□□□□□ -1.78
RNF220-217ENST00000496262 MT4P47944 62 aa3.92□□□□□ -1.78
RNF220-217ENST00000496262 HMCN1Q96RW7 5635 aa3.9□□□□□ -1.78
RNF220-217ENST00000496262 MT1MQ8N339 61 aa3.89□□□□□ -1.79
RNF220-217ENST00000496262 KRTAP12-3P60328 96 aa3.87□□□□□ -1.79
RNF220-217ENST00000496262 INE1O15225 51 aa3.86□□□□□ -1.79
RNF220-217ENST00000496262 MT1LQ93083 61 aa3.86□□□□□ -1.79
RNF220-217ENST00000496262 KRTAP4-3Q9BYR4 195 aa3.84□□□□□ -1.79
RNF220-217ENST00000496262 AHNAK2Q8IVF2 5795 aa3.8□□□□□ -1.8
RNF220-217ENST00000496262 KRTAP5-4Q6L8H1 288 aa3.75□□□□□ -1.81
RNF220-217ENST00000496262 KRTAP5-10Q6L8G5 202 aa3.72□□□□□ -1.81
RNF220-217ENST00000496262 LCE3CQ5T5A8 94 aa3.65□□□□□ -1.83
RNF220-217ENST00000496262 KRTAP20-2Q3LI61 65 aa3.59□□□□□ -1.83
RNF220-217ENST00000496262 KRTAP5-7Q6L8G8 165 aa3.58□□□□□ -1.84
RNF220-217ENST00000496262 KRTAP5-5Q701N2 237 aaPredicted RBP3.54□□□□□ -1.84
RNF220-217ENST00000496262 KRTAP12-4P60329 112 aa3.51□□□□□ -1.85
RNF220-217ENST00000496262 SYNE1Q8NF91 8797 aaKnown RBP3.46□□□□□ -1.86
RNF220-217ENST00000496262 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.86
RNF220-217ENST00000496262 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.43□□□□□ -1.86
RNF220-217ENST00000496262 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
RNF220-217ENST00000496262 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
RNF220-217ENST00000496262 MT1AP04731 61 aa3.27□□□□□ -1.89
RNF220-217ENST00000496262 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
RNF220-217ENST00000496262 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
RNF220-217ENST00000496262 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
RNF220-217ENST00000496262 KRTAP6-2Q3LI66 62 aa3.18□□□□□ -1.9
RNF220-217ENST00000496262 AHNAKQ09666 5890 aaKnown RBP3.17□□□□□ -1.9
RNF220-217ENST00000496262 MUC5ACP98088 5654 aa3.15□□□□□ -1.9
RNF220-217ENST00000496262 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
RNF220-217ENST00000496262 OBSCNQ5VST9 7968 aa3.12□□□□□ -1.91
RNF220-217ENST00000496262 MT3P25713 68 aa3.08□□□□□ -1.92
RNF220-217ENST00000496262 KRTAP5-1Q6L8H4 278 aa2.98□□□□□ -1.93
RNF220-217ENST00000496262 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
RNF220-217ENST00000496262 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
RNF220-217ENST00000496262 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
RNF220-217ENST00000496262 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
RNF220-217ENST00000496262 PRM1P04553 51 aa2.73□□□□□ -1.97
RNF220-217ENST00000496262 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
RNF220-217ENST00000496262 LCE1CQ5T751 118 aa2.56□□□□□ -2
RNF220-217ENST00000496262 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
RNF220-217ENST00000496262 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
RNF220-217ENST00000496262 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
RNF220-217ENST00000496262 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
RNF220-217ENST00000496262 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 85.5 ms