RNA–Protein interactions for RNA: ENST00000495530.5

PTPRE-211, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-211ENST00000495530 KRTAP10-5P60370 271 aa6.12□□□□□ -1.43
PTPRE-211ENST00000495530 MT1XP80297 61 aa6.08□□□□□ -1.44
PTPRE-211ENST00000495530 BRK1Q8WUW1 75 aa6.04□□□□□ -1.44
PTPRE-211ENST00000495530 SPRR2EP22531 72 aa5.98□□□□□ -1.45
PTPRE-211ENST00000495530 SPRR2BP35325 72 aa5.98□□□□□ -1.45
PTPRE-211ENST00000495530 SPRR2AP35326 72 aa5.98□□□□□ -1.45
PTPRE-211ENST00000495530 C10orf95Q9H7T3 257 aa5.9□□□□□ -1.46
PTPRE-211ENST00000495530 SPRR2FQ96RM1 72 aa5.87□□□□□ -1.47
PTPRE-211ENST00000495530 TNP1P09430 55 aa5.85□□□□□ -1.47
PTPRE-211ENST00000495530 ROMO1P60602 79 aa5.82□□□□□ -1.48
PTPRE-211ENST00000495530 KRTAP10-7P60409 375 aaPredicted RBP5.81□□□□□ -1.48
PTPRE-211ENST00000495530 KRTAP10-12P60413 245 aa5.8□□□□□ -1.48
PTPRE-211ENST00000495530 SPRR2DP22532 72 aa5.79□□□□□ -1.48
PTPRE-211ENST00000495530 PRO0628Q9UI54 55 aa5.79□□□□□ -1.48
PTPRE-211ENST00000495530 KRTAP25-1Q3LHN0 102 aa5.78□□□□□ -1.48
PTPRE-211ENST00000495530 LCE1AQ5T7P2 110 aa5.78□□□□□ -1.48
PTPRE-211ENST00000495530 PMAIP1Q13794 54 aa5.75□□□□□ -1.49
PTPRE-211ENST00000495530 KRTAP15-1Q3LI76 137 aa5.64□□□□□ -1.51
PTPRE-211ENST00000495530 DSTQ03001 7570 aaKnown RBP5.63□□□□□ -1.51
PTPRE-211ENST00000495530 KRTAP8-1Q8IUC2 63 aa5.63□□□□□ -1.51
PTPRE-211ENST00000495530 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
PTPRE-211ENST00000495530 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
PTPRE-211ENST00000495530 PP632Q6XCG6 107 aa5.55□□□□□ -1.52
PTPRE-211ENST00000495530 KRTAP19-5Q3LI72 72 aa5.43□□□□□ -1.54
PTPRE-211ENST00000495530 KRTAP19-7Q3SYF9 63 aa5.41□□□□□ -1.54
PTPRE-211ENST00000495530 SVIPQ8NHG7 77 aa5.41□□□□□ -1.54
PTPRE-211ENST00000495530 KRTAP12-3P60328 96 aa5.39□□□□□ -1.55
PTPRE-211ENST00000495530 KTN1-AS1Q86SY8 53 aa5.39□□□□□ -1.55
PTPRE-211ENST00000495530 MT1EP04732 61 aa5.35□□□□□ -1.55
PTPRE-211ENST00000495530 KRTAP5-10Q6L8G5 202 aa5.34□□□□□ -1.55
PTPRE-211ENST00000495530 HMCN1Q96RW7 5635 aa5.34□□□□□ -1.56
PTPRE-211ENST00000495530 AHNAK2Q8IVF2 5795 aa5.33□□□□□ -1.56
PTPRE-211ENST00000495530 PRAC1Q96KF2 57 aa5.31□□□□□ -1.56
PTPRE-211ENST00000495530 KRTAP5-7Q6L8G8 165 aa5.25□□□□□ -1.57
PTPRE-211ENST00000495530 KRTAP19-3Q7Z4W3 81 aa5.23□□□□□ -1.57
PTPRE-211ENST00000495530 MT1LQ93083 61 aa5.21□□□□□ -1.58
PTPRE-211ENST00000495530 MT1GP13640 62 aa5.2□□□□□ -1.58
PTPRE-211ENST00000495530 SPRR5A0A1B0GTR4 108 aa5.14□□□□□ -1.59
PTPRE-211ENST00000495530 MT4P47944 62 aa5.12□□□□□ -1.59
PTPRE-211ENST00000495530 MT1MQ8N339 61 aa5.06□□□□□ -1.6
PTPRE-211ENST00000495530 LCE3CQ5T5A8 94 aa5.02□□□□□ -1.61
PTPRE-211ENST00000495530 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.99□□□□□ -1.61
PTPRE-211ENST00000495530 KRTAP4-3Q9BYR4 195 aa4.89□□□□□ -1.63
PTPRE-211ENST00000495530 KRTAP5-11Q6L8G4 156 aa4.85□□□□□ -1.63
PTPRE-211ENST00000495530 KRTAP5-4Q6L8H1 288 aa4.82□□□□□ -1.64
PTPRE-211ENST00000495530 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
PTPRE-211ENST00000495530 AHNAKQ09666 5890 aaKnown RBP4.66□□□□□ -1.66
PTPRE-211ENST00000495530 KRTAP9-6A8MVA2 160 aa4.65□□□□□ -1.67
PTPRE-211ENST00000495530 KRTAP20-2Q3LI61 65 aa4.6□□□□□ -1.67
PTPRE-211ENST00000495530 MUC5ACP98088 5654 aa4.59□□□□□ -1.67
PTPRE-211ENST00000495530 A0A0A0MQY5 61 aa4.58□□□□□ -1.68
PTPRE-211ENST00000495530 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
PTPRE-211ENST00000495530 LUZP6Q538Z0 58 aa4.52□□□□□ -1.69
PTPRE-211ENST00000495530 MUC5BQ9HC84 5762 aaPredicted RBP4.5□□□□□ -1.69
PTPRE-211ENST00000495530 MT1AP04731 61 aa4.46□□□□□ -1.7
PTPRE-211ENST00000495530 KRTAP12-4P60329 112 aa4.41□□□□□ -1.7
PTPRE-211ENST00000495530 KRTAP6-1Q3LI64 71 aa4.37□□□□□ -1.71
PTPRE-211ENST00000495530 MT3P25713 68 aa4.35□□□□□ -1.71
PTPRE-211ENST00000495530 KRTAP5-8O75690 187 aa4.33□□□□□ -1.72
PTPRE-211ENST00000495530 KRTAP5-1Q6L8H4 278 aa4.28□□□□□ -1.72
PTPRE-211ENST00000495530 SYNE1Q8NF91 8797 aaKnown RBP4.23□□□□□ -1.73
PTPRE-211ENST00000495530 NDUFAF8A1L188 74 aa4.11□□□□□ -1.75
PTPRE-211ENST00000495530 KRTAP4-4Q9BYR3 166 aa4.11□□□□□ -1.75
PTPRE-211ENST00000495530 KRTAP5-2Q701N4 177 aa4.1□□□□□ -1.75
PTPRE-211ENST00000495530 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
PTPRE-211ENST00000495530 KRTAP6-2Q3LI66 62 aa4.09□□□□□ -1.75
PTPRE-211ENST00000495530 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
PTPRE-211ENST00000495530 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
PTPRE-211ENST00000495530 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
PTPRE-211ENST00000495530 INE1O15225 51 aa3.46□□□□□ -1.86
PTPRE-211ENST00000495530 LCE1CQ5T751 118 aa3.36□□□□□ -1.87
PTPRE-211ENST00000495530 LCE1BQ5T7P3 118 aa3.36□□□□□ -1.87
PTPRE-211ENST00000495530 PHGR1C9JFL3 82 aa3.16□□□□□ -1.9
PTPRE-211ENST00000495530 PRM1P04553 51 aa2.98□□□□□ -1.93
PTPRE-211ENST00000495530 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
PTPRE-211ENST00000495530 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
PTPRE-211ENST00000495530 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
PTPRE-211ENST00000495530 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 78.2 ms