RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 MUC17Q685J3 4493 aa0.27□□□□□ -2.37
PTPN12-212ENST00000494248 MYO15AQ9UKN7 3530 aa0.27□□□□□ -2.37
PTPN12-212ENST00000494248 CD52P31358 61 aa0.27□□□□□ -2.37
PTPN12-212ENST00000494248 COX14Q96I36 57 aa0.27□□□□□ -2.37
PTPN12-212ENST00000494248 RNF213Q63HN8 5207 aa0.27□□□□□ -2.37
PTPN12-212ENST00000494248 XIRP2A4UGR9 3374 aa0.27□□□□□ -2.37
PTPN12-212ENST00000494248 CDH23Q9H251 3354 aa0.27□□□□□ -2.37
PTPN12-212ENST00000494248 RIF1Q5UIP0 2472 aaKnown RBP0.27□□□□□ -2.37
PTPN12-212ENST00000494248 ANKHD1Q8IWZ3 2542 aaKnown RBP0.27□□□□□ -2.37
PTPN12-212ENST00000494248 CSMD2Q7Z408 3487 aa0.26□□□□□ -2.37
PTPN12-212ENST00000494248 STARD9Q9P2P6 4700 aa0.26□□□□□ -2.37
PTPN12-212ENST00000494248 A0A096LPF7 62 aa0.26□□□□□ -2.37
PTPN12-212ENST00000494248 DEFB108BQ8NET1 73 aa0.26□□□□□ -2.37
PTPN12-212ENST00000494248 NCOR2Q9Y618 2525 aa0.26□□□□□ -2.37
PTPN12-212ENST00000494248 ITPR1Q14643 2758 aa0.26□□□□□ -2.37
PTPN12-212ENST00000494248 LOC400499M0QZD8 3231 aa0.25□□□□□ -2.37
PTPN12-212ENST00000494248 LAMA1P25391 3075 aa0.25□□□□□ -2.37
PTPN12-212ENST00000494248 WDR87Q6ZQQ6 2873 aa0.25□□□□□ -2.37
PTPN12-212ENST00000494248 MT1EP04732 61 aa0.25□□□□□ -2.37
PTPN12-212ENST00000494248 C5orf42Q9H799 3197 aa0.25□□□□□ -2.37
PTPN12-212ENST00000494248 TGP01266 2768 aa0.25□□□□□ -2.37
PTPN12-212ENST00000494248 MYO18BQ8IUG5 2567 aa0.25□□□□□ -2.37
PTPN12-212ENST00000494248 DMDP11532 3685 aa0.25□□□□□ -2.37
PTPN12-212ENST00000494248 VPS13AQ96RL7 3174 aa0.24□□□□□ -2.37
PTPN12-212ENST00000494248 USH2AO75445 5202 aa0.24□□□□□ -2.37
PTPN12-212ENST00000494248 TEP1Q99973 2627 aaKnown RBP0.24□□□□□ -2.37
PTPN12-212ENST00000494248 MT1HP80294 61 aa0.24□□□□□ -2.37
PTPN12-212ENST00000494248 MXRA5Q9NR99 2828 aa0.24□□□□□ -2.37
PTPN12-212ENST00000494248 MUC12Q9UKN1 5478 aa0.24□□□□□ -2.37
PTPN12-212ENST00000494248 LRRK2Q5S007 2527 aa0.24□□□□□ -2.37
PTPN12-212ENST00000494248 DNAH14Q0VDD8 3507 aa0.24□□□□□ -2.37
PTPN12-212ENST00000494248 VPS13CQ709C8 3753 aa0.23□□□□□ -2.37
PTPN12-212ENST00000494248 FREM2Q5SZK8 3169 aa0.23□□□□□ -2.37
PTPN12-212ENST00000494248 DNAH12Q6ZR08 3092 aa0.23□□□□□ -2.37
PTPN12-212ENST00000494248 LRP2P98164 4655 aa0.23□□□□□ -2.37
PTPN12-212ENST00000494248 MT1LQ93083 61 aa0.23□□□□□ -2.37
PTPN12-212ENST00000494248 LRBAP50851 2863 aa0.23□□□□□ -2.37
PTPN12-212ENST00000494248 ADGRG4Q8IZF6 3080 aa0.22□□□□□ -2.37
PTPN12-212ENST00000494248 SPG11Q96JI7 2443 aa0.22□□□□□ -2.37
PTPN12-212ENST00000494248 DSTQ03001 7570 aaKnown RBP0.21□□□□□ -2.38
PTPN12-212ENST00000494248 MAP1AP78559 2803 aaPredicted RBP0.21□□□□□ -2.38
PTPN12-212ENST00000494248 TLN2Q9Y4G6 2542 aa0.21□□□□□ -2.38
PTPN12-212ENST00000494248 PHGR1C9JFL3 82 aa0.21□□□□□ -2.38
PTPN12-212ENST00000494248 FASNP49327 2511 aaKnown RBP0.21□□□□□ -2.38
PTPN12-212ENST00000494248 CFAP46Q8IYW2 2715 aa0.2□□□□□ -2.38
PTPN12-212ENST00000494248 MGAM2Q2M2H8 2515 aa0.2□□□□□ -2.38
PTPN12-212ENST00000494248 TEX15Q9BXT5 2789 aa0.19□□□□□ -2.38
PTPN12-212ENST00000494248 DEFB4AO15263 64 aa0.19□□□□□ -2.38
PTPN12-212ENST00000494248 FLNAP21333 2647 aaKnown RBP0.19□□□□□ -2.38
PTPN12-212ENST00000494248 USP9XQ93008 2570 aaPredicted RBP0.19□□□□□ -2.38
PTPN12-212ENST00000494248 CEP250Q9BV73 2442 aa0.18□□□□□ -2.38
PTPN12-212ENST00000494248 MT1XP80297 61 aa0.17□□□□□ -2.38
PTPN12-212ENST00000494248 IGSF10Q6WRI0 2623 aa0.17□□□□□ -2.38
PTPN12-212ENST00000494248 STAB2Q8WWQ8 2551 aa0.17□□□□□ -2.38
PTPN12-212ENST00000494248 SPRR2GQ9BYE4 73 aa0.16□□□□□ -2.38
PTPN12-212ENST00000494248 ITPR2Q14571 2701 aa0.16□□□□□ -2.38
PTPN12-212ENST00000494248 NBEAL1Q6ZS30 2694 aa0.16□□□□□ -2.38
PTPN12-212ENST00000494248 MYO9AB2RTY4 2548 aa0.15□□□□□ -2.39
PTPN12-212ENST00000494248 CENPEQ02224 2701 aa0.15□□□□□ -2.39
PTPN12-212ENST00000494248 HTN3P15516 51 aa0.14□□□□□ -2.39
PTPN12-212ENST00000494248 DOPEY1Q5JWR5 2465 aa0.11□□□□□ -2.39
PTPN12-212ENST00000494248 CEP295Q9C0D2 2601 aa0.1□□□□□ -2.39
PTPN12-212ENST00000494248 KRTAP19-7Q3SYF9 63 aa0.1□□□□□ -2.39
PTPN12-212ENST00000494248 SPTAN1Q13813 2472 aaKnown RBP0.09□□□□□ -2.39
PTPN12-212ENST00000494248 TLN1Q9Y490 2541 aaKnown RBP0.09□□□□□ -2.39
PTPN12-212ENST00000494248 MT1GP13640 62 aa0.09□□□□□ -2.4
PTPN12-212ENST00000494248 MT2AP02795 61 aa0.08□□□□□ -2.4
PTPN12-212ENST00000494248 KRTAP19-8Q3LI54 63 aa0.08□□□□□ -2.4
PTPN12-212ENST00000494248 KRTAP20-1Q3LI63 56 aa0.07□□□□□ -2.4
PTPN12-212ENST00000494248 KRTAP6-1Q3LI64 71 aa0.07□□□□□ -2.4
PTPN12-212ENST00000494248 MT1MQ8N339 61 aa0.07□□□□□ -2.4
PTPN12-212ENST00000494248 MT1HL1P0DM35 61 aa0.05□□□□□ -2.4
PTPN12-212ENST00000494248 MT1BP07438 61 aa0□□□□□ -2.41
PTPN12-212ENST00000494248 MT4P47944 62 aa-0.01□□□□□ -2.41
PTPN12-212ENST00000494248 KRTAP19-2Q3LHN2 52 aa-0.02□□□□□ -2.41
PTPN12-212ENST00000494248 MT1FP04733 61 aa-0.03□□□□□ -2.41
PTPN12-212ENST00000494248 KRTAP20-2Q3LI61 65 aa-0.04□□□□□ -2.42
PTPN12-212ENST00000494248 KRTAP19-6Q3LI70 58 aa-0.05□□□□□ -2.42
Retrieved 78 of 20,778 RNA–protein pairs in 39.4 ms