RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 PLAC4Q8WY50 150 aa4.28□□□□□ -1.72
SOX2-OT-215ENST00000493521 SPRR2FQ96RM1 72 aa4.28□□□□□ -1.72
SOX2-OT-215ENST00000493521 SPRR2EP22531 72 aa4.25□□□□□ -1.73
SOX2-OT-215ENST00000493521 SPRR2BP35325 72 aa4.25□□□□□ -1.73
SOX2-OT-215ENST00000493521 SPRR2AP35326 72 aa4.25□□□□□ -1.73
SOX2-OT-215ENST00000493521 KRTAP2-3P0C7H8 128 aa4.24□□□□□ -1.73
SOX2-OT-215ENST00000493521 CAMK2N1Q7Z7J9 78 aa4.24□□□□□ -1.73
SOX2-OT-215ENST00000493521 KRTAP2-4Q9BYR9 128 aa4.24□□□□□ -1.73
SOX2-OT-215ENST00000493521 LCE1AQ5T7P2 110 aa4.21□□□□□ -1.74
SOX2-OT-215ENST00000493521 ROMO1P60602 79 aa4.19□□□□□ -1.74
SOX2-OT-215ENST00000493521 KRTAP8-1Q8IUC2 63 aa4.18□□□□□ -1.74
SOX2-OT-215ENST00000493521 C10orf95Q9H7T3 257 aa4.16□□□□□ -1.74
SOX2-OT-215ENST00000493521 KRTAP10-7P60409 375 aaPredicted RBP4.13□□□□□ -1.75
SOX2-OT-215ENST00000493521 KTN1-AS1Q86SY8 53 aa4.12□□□□□ -1.75
SOX2-OT-215ENST00000493521 KRTAP2-2Q9BYT5 123 aa4.11□□□□□ -1.75
SOX2-OT-215ENST00000493521 KRTAP2-1Q9BYU5 128 aa4.11□□□□□ -1.75
SOX2-OT-215ENST00000493521 SPRR2DP22532 72 aa4.1□□□□□ -1.75
SOX2-OT-215ENST00000493521 PRO2289Q9P1D8 64 aa4.1□□□□□ -1.75
SOX2-OT-215ENST00000493521 PRAC1Q96KF2 57 aa4.06□□□□□ -1.76
SOX2-OT-215ENST00000493521 TNP1P09430 55 aa4.03□□□□□ -1.76
SOX2-OT-215ENST00000493521 KRTAP10-12P60413 245 aa4.03□□□□□ -1.76
SOX2-OT-215ENST00000493521 KRTAP25-1Q3LHN0 102 aa4.02□□□□□ -1.77
SOX2-OT-215ENST00000493521 LCE3AQ5TA76 89 aa3.88□□□□□ -1.79
SOX2-OT-215ENST00000493521 PP632Q6XCG6 107 aa3.87□□□□□ -1.79
SOX2-OT-215ENST00000493521 KRTAP19-7Q3SYF9 63 aa3.85□□□□□ -1.79
SOX2-OT-215ENST00000493521 DSTQ03001 7570 aaKnown RBP3.81□□□□□ -1.8
SOX2-OT-215ENST00000493521 MT1EP04732 61 aa3.8□□□□□ -1.8
SOX2-OT-215ENST00000493521 GPR98Q8WXG9 6306 aa3.76□□□□□ -1.81
SOX2-OT-215ENST00000493521 KRTAP19-3Q7Z4W3 81 aa3.76□□□□□ -1.81
SOX2-OT-215ENST00000493521 KRTAP19-5Q3LI72 72 aa3.72□□□□□ -1.81
SOX2-OT-215ENST00000493521 KRTAP12-3P60328 96 aa3.71□□□□□ -1.82
SOX2-OT-215ENST00000493521 KRTAP4-3Q9BYR4 195 aa3.67□□□□□ -1.82
SOX2-OT-215ENST00000493521 HMCN1Q96RW7 5635 aa3.66□□□□□ -1.82
SOX2-OT-215ENST00000493521 MT4P47944 62 aa3.65□□□□□ -1.83
SOX2-OT-215ENST00000493521 MT1MQ8N339 61 aa3.63□□□□□ -1.83
SOX2-OT-215ENST00000493521 AHNAK2Q8IVF2 5795 aa3.62□□□□□ -1.83
SOX2-OT-215ENST00000493521 MT1GP13640 62 aa3.61□□□□□ -1.83
SOX2-OT-215ENST00000493521 MT1LQ93083 61 aa3.61□□□□□ -1.83
SOX2-OT-215ENST00000493521 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
SOX2-OT-215ENST00000493521 KRTAP5-4Q6L8H1 288 aa3.54□□□□□ -1.84
SOX2-OT-215ENST00000493521 KRTAP5-10Q6L8G5 202 aa3.52□□□□□ -1.85
SOX2-OT-215ENST00000493521 LCE3CQ5T5A8 94 aa3.46□□□□□ -1.86
SOX2-OT-215ENST00000493521 SPRR5A0A1B0GTR4 108 aa3.42□□□□□ -1.86
SOX2-OT-215ENST00000493521 MT3P25713 68 aa3.37□□□□□ -1.87
SOX2-OT-215ENST00000493521 KRTAP20-2Q3LI61 65 aa3.37□□□□□ -1.87
SOX2-OT-215ENST00000493521 KRTAP5-7Q6L8G8 165 aa3.36□□□□□ -1.87
SOX2-OT-215ENST00000493521 KRTAP5-5Q701N2 237 aaPredicted RBP3.36□□□□□ -1.87
SOX2-OT-215ENST00000493521 LUZP6Q538Z0 58 aa3.33□□□□□ -1.88
SOX2-OT-215ENST00000493521 SYNE1Q8NF91 8797 aaKnown RBP3.32□□□□□ -1.88
SOX2-OT-215ENST00000493521 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
SOX2-OT-215ENST00000493521 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
SOX2-OT-215ENST00000493521 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
SOX2-OT-215ENST00000493521 KRTAP12-4P60329 112 aa3.18□□□□□ -1.9
SOX2-OT-215ENST00000493521 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
SOX2-OT-215ENST00000493521 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
SOX2-OT-215ENST00000493521 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
SOX2-OT-215ENST00000493521 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
SOX2-OT-215ENST00000493521 KRTAP5-8O75690 187 aa3.03□□□□□ -1.92
SOX2-OT-215ENST00000493521 MT1AP04731 61 aa3.03□□□□□ -1.92
SOX2-OT-215ENST00000493521 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
SOX2-OT-215ENST00000493521 KRTAP6-2Q3LI66 62 aa2.96□□□□□ -1.94
SOX2-OT-215ENST00000493521 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
SOX2-OT-215ENST00000493521 AHNAKQ09666 5890 aaKnown RBP2.94□□□□□ -1.94
SOX2-OT-215ENST00000493521 MUC5ACP98088 5654 aa2.93□□□□□ -1.94
SOX2-OT-215ENST00000493521 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.94
SOX2-OT-215ENST00000493521 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
SOX2-OT-215ENST00000493521 INE1O15225 51 aa2.71□□□□□ -1.98
SOX2-OT-215ENST00000493521 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
SOX2-OT-215ENST00000493521 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
SOX2-OT-215ENST00000493521 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
SOX2-OT-215ENST00000493521 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
SOX2-OT-215ENST00000493521 PRM1P04553 51 aa2.19□□□□□ -2.06
SOX2-OT-215ENST00000493521 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
SOX2-OT-215ENST00000493521 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
SOX2-OT-215ENST00000493521 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
SOX2-OT-215ENST00000493521 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
SOX2-OT-215ENST00000493521 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 11.9 ms