RNA–Protein interactions for RNA: ENST00000493109.2

COL12A1-209, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-209ENST00000493109 I3L3M4 83 aa-0.54□□□□□ -2.5
COL12A1-209ENST00000493109 ARMS2P0C7Q2 107 aa-0.54□□□□□ -2.5
COL12A1-209ENST00000493109 SNRPGP62308 76 aaKnown RBP-0.54□□□□□ -2.5
COL12A1-209ENST00000493109 RPL39LQ96EH5 51 aaKnown RBP-0.54□□□□□ -2.5
COL12A1-209ENST00000493109 SNHG12Q9BXW3 62 aa-0.54□□□□□ -2.5
COL12A1-209ENST00000493109 SMIM13P0DJ93 91 aa-0.55□□□□□ -2.5
COL12A1-209ENST00000493109 IGLC2P0DOY2 106 aa-0.55□□□□□ -2.5
COL12A1-209ENST00000493109 RBP2P50120 134 aa-0.55□□□□□ -2.5
COL12A1-209ENST00000493109 RPL39P62891 51 aaKnown RBP-0.55□□□□□ -2.5
COL12A1-209ENST00000493109 HMGN3Q15651 99 aa-0.55□□□□□ -2.5
COL12A1-209ENST00000493109 NMES1Q9C002 83 aa-0.55□□□□□ -2.5
COL12A1-209ENST00000493109 KRTDAPP60985 99 aa-0.56□□□□□ -2.5
COL12A1-209ENST00000493109 GTF2H5Q6ZYL4 71 aa-0.56□□□□□ -2.5
COL12A1-209ENST00000493109 DEFB107AQ8IZN7 70 aa-0.56□□□□□ -2.5
COL12A1-209ENST00000493109 DPY30Q9C005 99 aa-0.56□□□□□ -2.5
COL12A1-209ENST00000493109 LEPROTL1O95214 131 aa-0.57□□□□□ -2.5
COL12A1-209ENST00000493109 IFI27P40305 119 aaPredicted RBP-0.57□□□□□ -2.5
COL12A1-209ENST00000493109 C20orf78Q9BR46 151 aa-0.57□□□□□ -2.5
COL12A1-209ENST00000493109 ST20Q9HBF5 79 aa-0.57□□□□□ -2.5
COL12A1-209ENST00000493109 V9GYS6 101 aa-0.57□□□□□ -2.5
COL12A1-209ENST00000493109 TMEM218A2RU14 115 aa-0.58□□□□□ -2.5
COL12A1-209ENST00000493109 H0Y9P7 68 aa-0.58□□□□□ -2.5
COL12A1-209ENST00000493109 ZNF720Q7Z2F6 126 aa-0.58□□□□□ -2.5
COL12A1-209ENST00000493109 ACBD7Q8N6N7 88 aa-0.58□□□□□ -2.5
COL12A1-209ENST00000493109 LINC00308Q8TCZ7 52 aa-0.58□□□□□ -2.5
COL12A1-209ENST00000493109 PSENENQ9NZ42 101 aa-0.58□□□□□ -2.5
COL12A1-209ENST00000493109 CACFD1Q9UGQ2 172 aa-0.58□□□□□ -2.5
COL12A1-209ENST00000493109 CEBPZOSA8MTT3 80 aa-0.59□□□□□ -2.5
COL12A1-209ENST00000493109 H3BQF6 201 aa-0.59□□□□□ -2.5
COL12A1-209ENST00000493109 ATOX1O00244 68 aa-0.59□□□□□ -2.5
COL12A1-209ENST00000493109 GNGT2O14610 69 aa-0.59□□□□□ -2.5
COL12A1-209ENST00000493109 NREPQ16612 68 aa-0.59□□□□□ -2.5
COL12A1-209ENST00000493109 S100A13Q99584 98 aa-0.59□□□□□ -2.5
COL12A1-209ENST00000493109 VAMP8Q9BV40 100 aa-0.59□□□□□ -2.5
COL12A1-209ENST00000493109 AP4S1Q9Y587 144 aa-0.59□□□□□ -2.5
COL12A1-209ENST00000493109 IGIPA6NJ69 53 aa-0.6□□□□□ -2.51
COL12A1-209ENST00000493109 K7EMI3 77 aa-0.6□□□□□ -2.51
COL12A1-209ENST00000493109 MYMXA0A1B0GTQ4 84 aa-0.61□□□□□ -2.51
COL12A1-209ENST00000493109 IGLC3P0DOY3 106 aa-0.61□□□□□ -2.51
COL12A1-209ENST00000493109 RPL38P63173 70 aaKnown RBP-0.61□□□□□ -2.51
COL12A1-209ENST00000493109 GNGT1P63211 74 aa-0.61□□□□□ -2.51
COL12A1-209ENST00000493109 PMCHL1Q16048 86 aa-0.61□□□□□ -2.51
COL12A1-209ENST00000493109 TMEM167BQ9NRX6 74 aa-0.61□□□□□ -2.51
COL12A1-209ENST00000493109 SNRPFP62306 86 aaKnown RBP-0.62□□□□□ -2.51
COL12A1-209ENST00000493109 S100ZQ8WXG8 99 aa-0.63□□□□□ -2.51
COL12A1-209ENST00000493109 UMAD1C9J7I0 102 aa-0.64□□□□□ -2.51
COL12A1-209ENST00000493109 LINC00032P0C843 101 aa-0.64□□□□□ -2.51
COL12A1-209ENST00000493109 PMCHL2Q9BQD1 86 aa-0.64□□□□□ -2.51
COL12A1-209ENST00000493109 UBL5Q9BZL1 73 aa-0.64□□□□□ -2.51
COL12A1-209ENST00000493109 A0A1B0GUT8 65 aa-0.65□□□□□ -2.51
COL12A1-209ENST00000493109 H0YGX0 51 aa-0.65□□□□□ -2.51
COL12A1-209ENST00000493109 MPC2O95563 127 aa-0.65□□□□□ -2.51
COL12A1-209ENST00000493109 PLNP26678 52 aa-0.65□□□□□ -2.51
COL12A1-209ENST00000493109 GNG2P59768 71 aa-0.65□□□□□ -2.51
COL12A1-209ENST00000493109 C14orf144Q96I85 54 aa-0.65□□□□□ -2.51
COL12A1-209ENST00000493109 CMC2Q9NRP2 79 aa-0.65□□□□□ -2.51
COL12A1-209ENST00000493109 LINC01549A6NIU2 74 aa-0.67□□□□□ -2.52
COL12A1-209ENST00000493109 SERF2P84101 59 aa-0.68□□□□□ -2.52
COL12A1-209ENST00000493109 S100A16Q96FQ6 103 aaKnown RBP-0.68□□□□□ -2.52
COL12A1-209ENST00000493109 TCEAL7Q9BRU2 100 aa-0.68□□□□□ -2.52
COL12A1-209ENST00000493109 SMCO4Q9NRQ5 59 aa-0.68□□□□□ -2.52
COL12A1-209ENST00000493109 SMIM11AP58511 58 aa-0.69□□□□□ -2.52
COL12A1-209ENST00000493109 PEA15Q15121 130 aa-0.69□□□□□ -2.52
COL12A1-209ENST00000493109 COL5A1-AS1Q5SY13 56 aa-0.69□□□□□ -2.52
COL12A1-209ENST00000493109 FAUP35544 74 aaKnown RBP-0.7□□□□□ -2.52
COL12A1-209ENST00000493109 ETDBQ3ZM63 59 aa-0.7□□□□□ -2.52
COL12A1-209ENST00000493109 ATXN8Q156A1 80 aa-0.71□□□□□ -2.52
COL12A1-209ENST00000493109 GNG13Q9P2W3 67 aa-0.71□□□□□ -2.52
COL12A1-209ENST00000493109 C18orf32Q8TCD1 76 aa-0.72□□□□□ -2.52
COL12A1-209ENST00000493109 SMIM31A0A1B0GVY4 71 aa-0.73□□□□□ -2.53
COL12A1-209ENST00000493109 ADIRFQ15847 76 aa-0.73□□□□□ -2.53
COL12A1-209ENST00000493109 ATP5EP2Q5VTU8 51 aa-0.74□□□□□ -2.53
COL12A1-209ENST00000493109 LINC00643Q86TS7 51 aa-0.77□□□□□ -2.53
COL12A1-209ENST00000493109 TOMM5Q8N4H5 51 aa-0.77□□□□□ -2.53
COL12A1-209ENST00000493109 M0R143 59 aa-0.79□□□□□ -2.54
COL12A1-209ENST00000493109 KANTRA0A1W2PQU2 76 aa-0.8□□□□□ -2.54
COL12A1-209ENST00000493109 Q9H521 79 aa-0.8□□□□□ -2.54
COL12A1-209ENST00000493109 PYY3Q5JQD4 70 aa-0.84□□□□□ -2.54
Retrieved 78 of 20,778 RNA–protein pairs in 59.8 ms