RNA–Protein interactions for RNA: ENST00000492110.1

COL1A2-211, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-211ENST00000492110 KRTAP4-12Q9BQ66 201 aa4.86□□□□□ -1.63
COL1A2-211ENST00000492110 K7ERS5 55 aa4.84□□□□□ -1.63
COL1A2-211ENST00000492110 KRTAP10-7P60409 375 aaPredicted RBP4.82□□□□□ -1.64
COL1A2-211ENST00000492110 KRTAP10-12P60413 245 aa4.8□□□□□ -1.64
COL1A2-211ENST00000492110 KRTAP4-7Q9BYR0 210 aa4.75□□□□□ -1.65
COL1A2-211ENST00000492110 LUZP6Q538Z0 58 aa4.69□□□□□ -1.66
COL1A2-211ENST00000492110 KRTAP13-4Q3LI77 160 aa4.67□□□□□ -1.66
COL1A2-211ENST00000492110 LCE1DQ5T752 114 aa4.67□□□□□ -1.66
COL1A2-211ENST00000492110 GPR98Q8WXG9 6306 aa4.66□□□□□ -1.66
COL1A2-211ENST00000492110 DSTQ03001 7570 aaKnown RBP4.64□□□□□ -1.67
COL1A2-211ENST00000492110 NDUFAF8A1L188 74 aa4.63□□□□□ -1.67
COL1A2-211ENST00000492110 KRTAP15-1Q3LI76 137 aa4.61□□□□□ -1.67
COL1A2-211ENST00000492110 SPINT4Q6UDR6 99 aa4.61□□□□□ -1.67
COL1A2-211ENST00000492110 CAMK2N1Q7Z7J9 78 aa4.57□□□□□ -1.68
COL1A2-211ENST00000492110 A0A1B0GU33 70 aa4.56□□□□□ -1.68
COL1A2-211ENST00000492110 KRTAP4-9Q9BYQ8 210 aa4.56□□□□□ -1.68
COL1A2-211ENST00000492110 LCE5AQ5TCM9 118 aa4.54□□□□□ -1.68
COL1A2-211ENST00000492110 KRTAP4-2Q9BYR5 136 aa4.53□□□□□ -1.68
COL1A2-211ENST00000492110 KRTAP19-7Q3SYF9 63 aa4.52□□□□□ -1.69
COL1A2-211ENST00000492110 KRTAP19-3Q7Z4W3 81 aa4.51□□□□□ -1.69
COL1A2-211ENST00000492110 MT1EP04732 61 aa4.5□□□□□ -1.69
COL1A2-211ENST00000492110 A0A0D9SG42 100 aa4.46□□□□□ -1.7
COL1A2-211ENST00000492110 KRTAP12-1P59990 96 aa4.46□□□□□ -1.7
COL1A2-211ENST00000492110 MT1GP13640 62 aa4.39□□□□□ -1.71
COL1A2-211ENST00000492110 PP632Q6XCG6 107 aa4.37□□□□□ -1.71
COL1A2-211ENST00000492110 HMCN1Q96RW7 5635 aa4.36□□□□□ -1.71
COL1A2-211ENST00000492110 KRTAP19-5Q3LI72 72 aa4.35□□□□□ -1.71
COL1A2-211ENST00000492110 LCE4AQ5TA78 99 aa4.34□□□□□ -1.71
COL1A2-211ENST00000492110 KRTAP4-11Q9BYQ6 195 aa4.34□□□□□ -1.71
COL1A2-211ENST00000492110 MT4P47944 62 aa4.32□□□□□ -1.72
COL1A2-211ENST00000492110 KRTAP5-3Q6L8H2 238 aa4.31□□□□□ -1.72
COL1A2-211ENST00000492110 MT1MQ8N339 61 aa4.3□□□□□ -1.72
COL1A2-211ENST00000492110 AHNAK2Q8IVF2 5795 aa4.27□□□□□ -1.73
COL1A2-211ENST00000492110 MT1LQ93083 61 aa4.26□□□□□ -1.73
COL1A2-211ENST00000492110 C10orf95Q9H7T3 257 aa4.26□□□□□ -1.73
COL1A2-211ENST00000492110 KRTAP5-4Q6L8H1 288 aa4.21□□□□□ -1.74
COL1A2-211ENST00000492110 KRTAP4-3Q9BYR4 195 aa4.19□□□□□ -1.74
COL1A2-211ENST00000492110 KRTAP5-10Q6L8G5 202 aa4.17□□□□□ -1.74
COL1A2-211ENST00000492110 LCE3AQ5TA76 89 aa4.16□□□□□ -1.74
COL1A2-211ENST00000492110 TNP1P09430 55 aa4.15□□□□□ -1.75
COL1A2-211ENST00000492110 INE1O15225 51 aa4.06□□□□□ -1.76
COL1A2-211ENST00000492110 KRTAP5-7Q6L8G8 165 aa4.04□□□□□ -1.76
COL1A2-211ENST00000492110 KRTAP12-3P60328 96 aa4.02□□□□□ -1.77
COL1A2-211ENST00000492110 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
COL1A2-211ENST00000492110 SPRR5A0A1B0GTR4 108 aa3.96□□□□□ -1.78
COL1A2-211ENST00000492110 KRTAP23-1A1A580 65 aa3.95□□□□□ -1.78
COL1A2-211ENST00000492110 KRTAP5-5Q701N2 237 aaPredicted RBP3.95□□□□□ -1.78
COL1A2-211ENST00000492110 KRTAP12-4P60329 112 aa3.94□□□□□ -1.78
COL1A2-211ENST00000492110 SYNE1Q8NF91 8797 aaKnown RBP3.85□□□□□ -1.79
COL1A2-211ENST00000492110 KRTAP19-4Q3LI73 84 aa3.79□□□□□ -1.8
COL1A2-211ENST00000492110 LCE3CQ5T5A8 94 aa3.68□□□□□ -1.82
COL1A2-211ENST00000492110 KRTAP5-2Q701N4 177 aa3.64□□□□□ -1.83
COL1A2-211ENST00000492110 MT1AP04731 61 aa3.63□□□□□ -1.83
COL1A2-211ENST00000492110 KRTAP6-1Q3LI64 71 aa3.61□□□□□ -1.83
COL1A2-211ENST00000492110 AHNAKQ09666 5890 aaKnown RBP3.6□□□□□ -1.83
COL1A2-211ENST00000492110 MUC5BQ9HC84 5762 aaPredicted RBP3.56□□□□□ -1.84
COL1A2-211ENST00000492110 MUC5ACP98088 5654 aa3.56□□□□□ -1.84
COL1A2-211ENST00000492110 KRTAP5-8O75690 187 aa3.56□□□□□ -1.84
COL1A2-211ENST00000492110 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
COL1A2-211ENST00000492110 KRTAP6-2Q3LI66 62 aa3.5□□□□□ -1.85
COL1A2-211ENST00000492110 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
COL1A2-211ENST00000492110 MT3P25713 68 aa3.34□□□□□ -1.87
COL1A2-211ENST00000492110 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
COL1A2-211ENST00000492110 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
COL1A2-211ENST00000492110 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
COL1A2-211ENST00000492110 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
COL1A2-211ENST00000492110 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
COL1A2-211ENST00000492110 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
COL1A2-211ENST00000492110 LCE3DQ9BYE3 92 aa2.66□□□□□ -1.98
COL1A2-211ENST00000492110 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
COL1A2-211ENST00000492110 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
COL1A2-211ENST00000492110 LCE3EQ5T5B0 92 aa2.53□□□□□ -2
COL1A2-211ENST00000492110 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
COL1A2-211ENST00000492110 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
COL1A2-211ENST00000492110 PRM1P04553 51 aa2.35□□□□□ -2.03
COL1A2-211ENST00000492110 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
COL1A2-211ENST00000492110 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
COL1A2-211ENST00000492110 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 65.5 ms