RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 KRTAP5-10Q6L8G5 202 aa5.1□□□□□ -1.59
CTDSP1-210ENST00000491064 MIR22HGQ0VDD5 57 aa5.07□□□□□ -1.6
CTDSP1-210ENST00000491064 SPATA8Q6RVD6 105 aa5.07□□□□□ -1.6
CTDSP1-210ENST00000491064 CDC42SE1Q9NRR8 79 aa5.06□□□□□ -1.6
CTDSP1-210ENST00000491064 MT1GP13640 62 aa4.97□□□□□ -1.61
CTDSP1-210ENST00000491064 KRTAP5-7Q6L8G8 165 aa4.97□□□□□ -1.61
CTDSP1-210ENST00000491064 KRTAP13-4Q3LI77 160 aa4.95□□□□□ -1.62
CTDSP1-210ENST00000491064 KRTAP5-4Q6L8H1 288 aa4.94□□□□□ -1.62
CTDSP1-210ENST00000491064 KRTAP4-6Q9BYQ5 205 aa4.94□□□□□ -1.62
CTDSP1-210ENST00000491064 K7ERS5 55 aa4.93□□□□□ -1.62
CTDSP1-210ENST00000491064 PP632Q6XCG6 107 aa4.92□□□□□ -1.62
CTDSP1-210ENST00000491064 MT1MQ8N339 61 aa4.89□□□□□ -1.63
CTDSP1-210ENST00000491064 A8MU10 97 aa4.88□□□□□ -1.63
CTDSP1-210ENST00000491064 KRTAP19-5Q3LI72 72 aa4.88□□□□□ -1.63
CTDSP1-210ENST00000491064 CAMK2N1Q7Z7J9 78 aa4.88□□□□□ -1.63
CTDSP1-210ENST00000491064 KRTAP5-3Q6L8H2 238 aa4.87□□□□□ -1.63
CTDSP1-210ENST00000491064 A0A0D9SG42 100 aa4.86□□□□□ -1.63
CTDSP1-210ENST00000491064 PMAIP1Q13794 54 aa4.85□□□□□ -1.63
CTDSP1-210ENST00000491064 KRTAP12-1P59990 96 aa4.83□□□□□ -1.64
CTDSP1-210ENST00000491064 KRTAP4-3Q9BYR4 195 aa4.81□□□□□ -1.64
CTDSP1-210ENST00000491064 MT1LQ93083 61 aa4.8□□□□□ -1.64
CTDSP1-210ENST00000491064 SPINT4Q6UDR6 99 aa4.79□□□□□ -1.64
CTDSP1-210ENST00000491064 SPRR5A0A1B0GTR4 108 aa4.75□□□□□ -1.65
CTDSP1-210ENST00000491064 KTN1-AS1Q86SY8 53 aa4.71□□□□□ -1.66
CTDSP1-210ENST00000491064 KRTAP20-2Q3LI61 65 aa4.69□□□□□ -1.66
CTDSP1-210ENST00000491064 ROMO1P60602 79 aa4.65□□□□□ -1.67
CTDSP1-210ENST00000491064 C10orf95Q9H7T3 257 aa4.58□□□□□ -1.68
CTDSP1-210ENST00000491064 KRTAP4-7Q9BYR0 210 aa4.55□□□□□ -1.68
CTDSP1-210ENST00000491064 KRTAP25-1Q3LHN0 102 aa4.54□□□□□ -1.68
CTDSP1-210ENST00000491064 LCE3AQ5TA76 89 aa4.54□□□□□ -1.68
CTDSP1-210ENST00000491064 KRTAP5-5Q701N2 237 aaPredicted RBP4.54□□□□□ -1.68
CTDSP1-210ENST00000491064 SYNE1Q8NF91 8797 aaKnown RBP4.52□□□□□ -1.69
CTDSP1-210ENST00000491064 TNP1P09430 55 aa4.51□□□□□ -1.69
CTDSP1-210ENST00000491064 KRTAP12-4P60329 112 aa4.51□□□□□ -1.69
CTDSP1-210ENST00000491064 KRTAP23-1A1A580 65 aa4.46□□□□□ -1.7
CTDSP1-210ENST00000491064 PRAC1Q96KF2 57 aa4.44□□□□□ -1.7
CTDSP1-210ENST00000491064 KRTAP4-11Q9BYQ6 195 aa4.39□□□□□ -1.71
CTDSP1-210ENST00000491064 AHNAKQ09666 5890 aaKnown RBP4.38□□□□□ -1.71
CTDSP1-210ENST00000491064 MUC5BQ9HC84 5762 aaPredicted RBP4.35□□□□□ -1.71
CTDSP1-210ENST00000491064 KRTAP12-3P60328 96 aa4.35□□□□□ -1.71
CTDSP1-210ENST00000491064 LOC100996750A0A140TA64 210 aa4.34□□□□□ -1.71
CTDSP1-210ENST00000491064 MUC5ACP98088 5654 aa4.34□□□□□ -1.72
CTDSP1-210ENST00000491064 KRTAP5-8O75690 187 aa4.27□□□□□ -1.73
CTDSP1-210ENST00000491064 KRTAP5-2Q701N4 177 aa4.25□□□□□ -1.73
CTDSP1-210ENST00000491064 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
CTDSP1-210ENST00000491064 KRTAP9-9Q9BYP9 154 aa4.1□□□□□ -1.75
CTDSP1-210ENST00000491064 KRTAP6-1Q3LI64 71 aa4.09□□□□□ -1.75
CTDSP1-210ENST00000491064 MT1AP04731 61 aa4.08□□□□□ -1.76
CTDSP1-210ENST00000491064 KRTAP19-4Q3LI73 84 aa4.08□□□□□ -1.76
CTDSP1-210ENST00000491064 KRTAP15-1Q3LI76 137 aa4.04□□□□□ -1.76
CTDSP1-210ENST00000491064 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
CTDSP1-210ENST00000491064 KRTAP9-4Q9BYQ2 154 aa3.98□□□□□ -1.77
CTDSP1-210ENST00000491064 LCE3CQ5T5A8 94 aa3.96□□□□□ -1.78
CTDSP1-210ENST00000491064 KRTAP5-1Q6L8H4 278 aa3.9□□□□□ -1.79
CTDSP1-210ENST00000491064 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
CTDSP1-210ENST00000491064 MT3P25713 68 aa3.74□□□□□ -1.81
CTDSP1-210ENST00000491064 LUZP6Q538Z0 58 aa3.73□□□□□ -1.81
CTDSP1-210ENST00000491064 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
CTDSP1-210ENST00000491064 H3BS24 57 aa3.59□□□□□ -1.83
CTDSP1-210ENST00000491064 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
CTDSP1-210ENST00000491064 A0A0A0MQY5 61 aa3.45□□□□□ -1.86
CTDSP1-210ENST00000491064 KRTAP4-2Q9BYR5 136 aa3.41□□□□□ -1.86
CTDSP1-210ENST00000491064 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
CTDSP1-210ENST00000491064 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
CTDSP1-210ENST00000491064 KRTAP4-12Q9BQ66 201 aa3.26□□□□□ -1.89
CTDSP1-210ENST00000491064 INE1O15225 51 aa3.13□□□□□ -1.91
CTDSP1-210ENST00000491064 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
CTDSP1-210ENST00000491064 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
CTDSP1-210ENST00000491064 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
CTDSP1-210ENST00000491064 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
CTDSP1-210ENST00000491064 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
CTDSP1-210ENST00000491064 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
CTDSP1-210ENST00000491064 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
CTDSP1-210ENST00000491064 MUC19Q7Z5P9 8384 aa2.59□□□□□ -1.99
CTDSP1-210ENST00000491064 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
CTDSP1-210ENST00000491064 PRM1P04553 51 aa2.36□□□□□ -2.03
CTDSP1-210ENST00000491064 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
CTDSP1-210ENST00000491064 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 45.6 ms