RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 KRTAP25-1Q3LHN0 102 aa4.74□□□□□ -1.65
CDCP1-203ENST00000490471 SPRR2EP22531 72 aa4.73□□□□□ -1.65
CDCP1-203ENST00000490471 SPRR2BP35325 72 aa4.73□□□□□ -1.65
CDCP1-203ENST00000490471 SPRR2AP35326 72 aa4.73□□□□□ -1.65
CDCP1-203ENST00000490471 KRTAP12-2P59991 146 aa4.71□□□□□ -1.66
CDCP1-203ENST00000490471 MT1XP80297 61 aa4.71□□□□□ -1.66
CDCP1-203ENST00000490471 MUC12Q9UKN1 5478 aa4.7□□□□□ -1.66
CDCP1-203ENST00000490471 P0C880 135 aa4.7□□□□□ -1.66
CDCP1-203ENST00000490471 KRTAP10-7P60409 375 aaPredicted RBP4.67□□□□□ -1.66
CDCP1-203ENST00000490471 KRTAP2-2Q9BYT5 123 aa4.67□□□□□ -1.66
CDCP1-203ENST00000490471 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.62□□□□□ -1.67
CDCP1-203ENST00000490471 A0A0D9SG42 100 aa4.61□□□□□ -1.67
CDCP1-203ENST00000490471 KRTAP2-1Q9BYU5 128 aa4.61□□□□□ -1.67
CDCP1-203ENST00000490471 KMT2DO14686 5537 aa4.6□□□□□ -1.67
CDCP1-203ENST00000490471 KRTAP13-4Q3LI77 160 aa4.59□□□□□ -1.67
CDCP1-203ENST00000490471 SPRR2DP22532 72 aa4.58□□□□□ -1.68
CDCP1-203ENST00000490471 KRTAP5-11Q6L8G4 156 aa4.58□□□□□ -1.68
CDCP1-203ENST00000490471 SPINT4Q6UDR6 99 aa4.53□□□□□ -1.68
CDCP1-203ENST00000490471 KRTAP12-1P59990 96 aa4.52□□□□□ -1.69
CDCP1-203ENST00000490471 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
CDCP1-203ENST00000490471 MDN1Q9NU22 5596 aa4.51□□□□□ -1.69
CDCP1-203ENST00000490471 CAMK2N1Q7Z7J9 78 aa4.5□□□□□ -1.69
CDCP1-203ENST00000490471 LCE1EQ5T753 118 aa4.46□□□□□ -1.7
CDCP1-203ENST00000490471 PP632Q6XCG6 107 aa4.36□□□□□ -1.71
CDCP1-203ENST00000490471 MT3P25713 68 aa4.35□□□□□ -1.71
CDCP1-203ENST00000490471 C10orf95Q9H7T3 257 aa4.32□□□□□ -1.72
CDCP1-203ENST00000490471 KRTAP19-3Q7Z4W3 81 aa4.24□□□□□ -1.73
CDCP1-203ENST00000490471 MT1EP04732 61 aa4.2□□□□□ -1.74
CDCP1-203ENST00000490471 KRTAP19-7Q3SYF9 63 aa4.2□□□□□ -1.74
CDCP1-203ENST00000490471 TNP1P09430 55 aa4.18□□□□□ -1.74
CDCP1-203ENST00000490471 MT1GP13640 62 aa4.18□□□□□ -1.74
CDCP1-203ENST00000490471 KRTAP19-5Q3LI72 72 aa4.11□□□□□ -1.75
CDCP1-203ENST00000490471 NDUFAF8A1L188 74 aa4.1□□□□□ -1.75
CDCP1-203ENST00000490471 LUZP6Q538Z0 58 aa4.09□□□□□ -1.75
CDCP1-203ENST00000490471 DSTQ03001 7570 aaKnown RBP4.04□□□□□ -1.76
CDCP1-203ENST00000490471 MT1MQ8N339 61 aa4.01□□□□□ -1.77
CDCP1-203ENST00000490471 MT1LQ93083 61 aa4□□□□□ -1.77
CDCP1-203ENST00000490471 MT4P47944 62 aa3.98□□□□□ -1.77
CDCP1-203ENST00000490471 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
CDCP1-203ENST00000490471 LCE3AQ5TA76 89 aa3.97□□□□□ -1.77
CDCP1-203ENST00000490471 GPR98Q8WXG9 6306 aa3.93□□□□□ -1.78
CDCP1-203ENST00000490471 A0A0A0MQY5 61 aa3.89□□□□□ -1.79
CDCP1-203ENST00000490471 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
CDCP1-203ENST00000490471 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
CDCP1-203ENST00000490471 KRTAP12-3P60328 96 aa3.88□□□□□ -1.79
CDCP1-203ENST00000490471 KRTAP5-4Q6L8H1 288 aa3.88□□□□□ -1.79
CDCP1-203ENST00000490471 KRTAP4-3Q9BYR4 195 aa3.83□□□□□ -1.8
CDCP1-203ENST00000490471 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
CDCP1-203ENST00000490471 KRTAP4-4Q9BYR3 166 aa3.81□□□□□ -1.8
CDCP1-203ENST00000490471 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
CDCP1-203ENST00000490471 KRTAP5-10Q6L8G5 202 aa3.75□□□□□ -1.81
CDCP1-203ENST00000490471 HMCN1Q96RW7 5635 aa3.73□□□□□ -1.81
CDCP1-203ENST00000490471 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
CDCP1-203ENST00000490471 KRTAP5-7Q6L8G8 165 aa3.67□□□□□ -1.82
CDCP1-203ENST00000490471 KRTAP5-5Q701N2 237 aaPredicted RBP3.64□□□□□ -1.83
CDCP1-203ENST00000490471 AHNAK2Q8IVF2 5795 aa3.63□□□□□ -1.83
CDCP1-203ENST00000490471 LCE3CQ5T5A8 94 aa3.6□□□□□ -1.83
CDCP1-203ENST00000490471 INE1O15225 51 aa3.56□□□□□ -1.84
CDCP1-203ENST00000490471 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
CDCP1-203ENST00000490471 MT1AP04731 61 aa3.44□□□□□ -1.86
CDCP1-203ENST00000490471 SYNE1Q8NF91 8797 aaKnown RBP3.39□□□□□ -1.87
CDCP1-203ENST00000490471 KRTAP6-1Q3LI64 71 aa3.36□□□□□ -1.87
CDCP1-203ENST00000490471 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
CDCP1-203ENST00000490471 KRTAP6-2Q3LI66 62 aa3.26□□□□□ -1.89
CDCP1-203ENST00000490471 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
CDCP1-203ENST00000490471 KRTAP5-8O75690 187 aa3.25□□□□□ -1.89
CDCP1-203ENST00000490471 MUC5ACP98088 5654 aa3.05□□□□□ -1.92
CDCP1-203ENST00000490471 AHNAKQ09666 5890 aaKnown RBP3□□□□□ -1.93
CDCP1-203ENST00000490471 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.94
CDCP1-203ENST00000490471 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
CDCP1-203ENST00000490471 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
CDCP1-203ENST00000490471 LCE3DQ9BYE3 92 aa2.7□□□□□ -1.98
CDCP1-203ENST00000490471 PRM1P04553 51 aa2.43□□□□□ -2.02
CDCP1-203ENST00000490471 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
CDCP1-203ENST00000490471 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
CDCP1-203ENST00000490471 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
CDCP1-203ENST00000490471 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
CDCP1-203ENST00000490471 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 115.5 ms