RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 KRTAP13-4Q3LI77 160 aa4.56□□□□□ -1.68
ACTN4-206ENST00000489451 KRTAP4-2Q9BYR5 136 aa4.54□□□□□ -1.68
ACTN4-206ENST00000489451 A0A1B0GU33 70 aa4.53□□□□□ -1.68
ACTN4-206ENST00000489451 A0A0A0MQY5 61 aa4.51□□□□□ -1.69
ACTN4-206ENST00000489451 A0A0D9SG42 100 aa4.5□□□□□ -1.69
ACTN4-206ENST00000489451 PRO0628Q9UI54 55 aa4.5□□□□□ -1.69
ACTN4-206ENST00000489451 A0A1B0GU69 56 aa4.49□□□□□ -1.69
ACTN4-206ENST00000489451 SPATA8Q6RVD6 105 aa4.48□□□□□ -1.69
ACTN4-206ENST00000489451 MT4P47944 62 aa4.47□□□□□ -1.69
ACTN4-206ENST00000489451 KRTAP19-7Q3SYF9 63 aa4.46□□□□□ -1.7
ACTN4-206ENST00000489451 SPINT4Q6UDR6 99 aa4.45□□□□□ -1.7
ACTN4-206ENST00000489451 MT1EP04732 61 aa4.41□□□□□ -1.7
ACTN4-206ENST00000489451 PRR15LQ9BU68 103 aa4.41□□□□□ -1.7
ACTN4-206ENST00000489451 KRTAP19-3Q7Z4W3 81 aa4.4□□□□□ -1.71
ACTN4-206ENST00000489451 BRK1Q8WUW1 75 aa4.39□□□□□ -1.71
ACTN4-206ENST00000489451 V9GYY9 64 aa4.38□□□□□ -1.71
ACTN4-206ENST00000489451 KRTAP12-1P59990 96 aa4.37□□□□□ -1.71
ACTN4-206ENST00000489451 KRTAP5-3Q6L8H2 238 aa4.36□□□□□ -1.71
ACTN4-206ENST00000489451 Q1T7F1 81 aa4.35□□□□□ -1.71
ACTN4-206ENST00000489451 A8MU10 97 aa4.31□□□□□ -1.72
ACTN4-206ENST00000489451 LINC01558Q9Y6Z2 57 aa4.3□□□□□ -1.72
ACTN4-206ENST00000489451 KRTAP19-5Q3LI72 72 aa4.26□□□□□ -1.73
ACTN4-206ENST00000489451 PMAIP1Q13794 54 aa4.25□□□□□ -1.73
ACTN4-206ENST00000489451 MT1GP13640 62 aa4.24□□□□□ -1.73
ACTN4-206ENST00000489451 UQCR11O14957 56 aa4.23□□□□□ -1.73
ACTN4-206ENST00000489451 PSPHP1O15172 72 aa4.23□□□□□ -1.73
ACTN4-206ENST00000489451 TNP1P09430 55 aa4.22□□□□□ -1.73
ACTN4-206ENST00000489451 MT1MQ8N339 61 aa4.21□□□□□ -1.74
ACTN4-206ENST00000489451 MT1LQ93083 61 aa4.18□□□□□ -1.74
ACTN4-206ENST00000489451 C10orf95Q9H7T3 257 aa4.17□□□□□ -1.74
ACTN4-206ENST00000489451 KRTAP4-3Q9BYR4 195 aa4.16□□□□□ -1.74
ACTN4-206ENST00000489451 KRTAP5-4Q6L8H1 288 aa4.15□□□□□ -1.75
ACTN4-206ENST00000489451 PP632Q6XCG6 107 aa4.15□□□□□ -1.75
ACTN4-206ENST00000489451 A6NED7 52 aa4.14□□□□□ -1.75
ACTN4-206ENST00000489451 MIR22HGQ0VDD5 57 aa4.13□□□□□ -1.75
ACTN4-206ENST00000489451 CDC42SE1Q9NRR8 79 aa4.12□□□□□ -1.75
ACTN4-206ENST00000489451 K7ERS5 55 aa4.11□□□□□ -1.75
ACTN4-206ENST00000489451 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
ACTN4-206ENST00000489451 LCE3AQ5TA76 89 aa4.1□□□□□ -1.75
ACTN4-206ENST00000489451 AHNAKQ09666 5890 aaKnown RBP4.03□□□□□ -1.76
ACTN4-206ENST00000489451 KRTAP25-1Q3LHN0 102 aa4.01□□□□□ -1.77
ACTN4-206ENST00000489451 KRTAP12-3P60328 96 aa3.98□□□□□ -1.77
ACTN4-206ENST00000489451 MUC5ACP98088 5654 aa3.96□□□□□ -1.77
ACTN4-206ENST00000489451 KRTAP20-2Q3LI61 65 aa3.96□□□□□ -1.78
ACTN4-206ENST00000489451 MT3P25713 68 aa3.94□□□□□ -1.78
ACTN4-206ENST00000489451 KRTAP5-5Q701N2 237 aaPredicted RBP3.92□□□□□ -1.78
ACTN4-206ENST00000489451 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
ACTN4-206ENST00000489451 PRAC1Q96KF2 57 aa3.81□□□□□ -1.8
ACTN4-206ENST00000489451 ROMO1P60602 79 aa3.78□□□□□ -1.8
ACTN4-206ENST00000489451 KRTAP5-8O75690 187 aa3.76□□□□□ -1.81
ACTN4-206ENST00000489451 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
ACTN4-206ENST00000489451 KRTAP12-4P60329 112 aa3.74□□□□□ -1.81
ACTN4-206ENST00000489451 NDUFAF8A1L188 74 aa3.71□□□□□ -1.82
ACTN4-206ENST00000489451 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
ACTN4-206ENST00000489451 KRTAP5-2Q701N4 177 aa3.62□□□□□ -1.83
ACTN4-206ENST00000489451 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
ACTN4-206ENST00000489451 MT1AP04731 61 aa3.54□□□□□ -1.84
ACTN4-206ENST00000489451 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
ACTN4-206ENST00000489451 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
ACTN4-206ENST00000489451 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
ACTN4-206ENST00000489451 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
ACTN4-206ENST00000489451 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
ACTN4-206ENST00000489451 KRTAP5-1Q6L8H4 278 aa3.29□□□□□ -1.88
ACTN4-206ENST00000489451 LUZP6Q538Z0 58 aa3.14□□□□□ -1.91
ACTN4-206ENST00000489451 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
ACTN4-206ENST00000489451 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.93□□□□□ -1.94
ACTN4-206ENST00000489451 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
ACTN4-206ENST00000489451 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
ACTN4-206ENST00000489451 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
ACTN4-206ENST00000489451 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
ACTN4-206ENST00000489451 INE1O15225 51 aa2.78□□□□□ -1.96
ACTN4-206ENST00000489451 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
ACTN4-206ENST00000489451 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
ACTN4-206ENST00000489451 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
ACTN4-206ENST00000489451 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
ACTN4-206ENST00000489451 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
ACTN4-206ENST00000489451 PRM1P04553 51 aa1.91□□□□□ -2.1
ACTN4-206ENST00000489451 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 76.5 ms