RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 TRAV22A0A0B4J277 110 aa3.79□□□□□ -1.8
SSBP1-212ENST00000489378 P0C880 135 aa3.79□□□□□ -1.8
SSBP1-212ENST00000489378 K7EQZ3 153 aa3.78□□□□□ -1.8
SSBP1-212ENST00000489378 CHKB-CPT1BH3BT56 60 aa3.78□□□□□ -1.8
SSBP1-212ENST00000489378 NDUFB1O75438 58 aa3.78□□□□□ -1.8
SSBP1-212ENST00000489378 NREPQ16612 68 aa3.78□□□□□ -1.8
SSBP1-212ENST00000489378 S4R3F8 94 aa3.78□□□□□ -1.8
SSBP1-212ENST00000489378 MMP24-AS1A0A0U1RRL7 71 aa3.76□□□□□ -1.81
SSBP1-212ENST00000489378 CRIPTQ9P021 101 aa3.76□□□□□ -1.81
SSBP1-212ENST00000489378 UBL5Q9BZL1 73 aa3.75□□□□□ -1.81
SSBP1-212ENST00000489378 KRTAP5-10Q6L8G5 202 aa3.74□□□□□ -1.81
SSBP1-212ENST00000489378 SPINT4Q6UDR6 99 aa3.74□□□□□ -1.81
SSBP1-212ENST00000489378 C20orf197Q8N268 126 aa3.74□□□□□ -1.81
SSBP1-212ENST00000489378 A0A087WVE0 104 aa3.73□□□□□ -1.81
SSBP1-212ENST00000489378 MRPL34Q9BQ48 92 aaKnown RBP3.71□□□□□ -1.82
SSBP1-212ENST00000489378 DMAC1Q96GE9 116 aa3.7□□□□□ -1.82
SSBP1-212ENST00000489378 ATP5EP2Q5VTU8 51 aa3.7□□□□□ -1.82
SSBP1-212ENST00000489378 R4GN34 69 aa3.7□□□□□ -1.82
SSBP1-212ENST00000489378 LOC101927531A0A1B0GV80 90 aa3.67□□□□□ -1.82
SSBP1-212ENST00000489378 A8MU10 97 aa3.66□□□□□ -1.82
SSBP1-212ENST00000489378 MT4P47944 62 aa3.65□□□□□ -1.83
SSBP1-212ENST00000489378 LCE3CQ5T5A8 94 aa3.65□□□□□ -1.83
SSBP1-212ENST00000489378 KRTAP5-7Q6L8G8 165 aa3.64□□□□□ -1.83
SSBP1-212ENST00000489378 PLAC4Q8WY50 150 aa3.64□□□□□ -1.83
SSBP1-212ENST00000489378 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
SSBP1-212ENST00000489378 PRR15LQ9BU68 103 aa3.57□□□□□ -1.84
SSBP1-212ENST00000489378 SPRR5A0A1B0GTR4 108 aa3.56□□□□□ -1.84
SSBP1-212ENST00000489378 H0Y9P7 68 aa3.53□□□□□ -1.85
SSBP1-212ENST00000489378 H0YAA0 97 aa3.52□□□□□ -1.85
SSBP1-212ENST00000489378 KRTAP4-3Q9BYR4 195 aa3.52□□□□□ -1.85
SSBP1-212ENST00000489378 TP53AIP1Q9HCN2 124 aa3.52□□□□□ -1.85
SSBP1-212ENST00000489378 SNURFQ9Y675 71 aa3.51□□□□□ -1.85
SSBP1-212ENST00000489378 LINC01558Q9Y6Z2 57 aa3.51□□□□□ -1.85
SSBP1-212ENST00000489378 KRTAP19-3Q7Z4W3 81 aa3.49□□□□□ -1.85
SSBP1-212ENST00000489378 LINC00208Q96KT6 92 aa3.48□□□□□ -1.85
SSBP1-212ENST00000489378 UQCR11O14957 56 aa3.46□□□□□ -1.86
SSBP1-212ENST00000489378 MT1EP04732 61 aa3.44□□□□□ -1.86
SSBP1-212ENST00000489378 KRTAP19-7Q3SYF9 63 aa3.44□□□□□ -1.86
SSBP1-212ENST00000489378 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
SSBP1-212ENST00000489378 AHNAKQ09666 5890 aaKnown RBP3.4□□□□□ -1.86
SSBP1-212ENST00000489378 M0QZ58 72 aa3.39□□□□□ -1.87
SSBP1-212ENST00000489378 SPATA8Q6RVD6 105 aa3.35□□□□□ -1.87
SSBP1-212ENST00000489378 MT1GP13640 62 aa3.34□□□□□ -1.88
SSBP1-212ENST00000489378 INE1O15225 51 aa3.33□□□□□ -1.88
SSBP1-212ENST00000489378 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
SSBP1-212ENST00000489378 LCE3AQ5TA76 89 aa3.33□□□□□ -1.88
SSBP1-212ENST00000489378 MT1MQ8N339 61 aa3.3□□□□□ -1.88
SSBP1-212ENST00000489378 MUC5ACP98088 5654 aa3.29□□□□□ -1.88
SSBP1-212ENST00000489378 KRTAP20-2Q3LI61 65 aa3.28□□□□□ -1.88
SSBP1-212ENST00000489378 PP632Q6XCG6 107 aa3.28□□□□□ -1.88
SSBP1-212ENST00000489378 COA5Q86WW8 74 aa3.27□□□□□ -1.89
SSBP1-212ENST00000489378 ACYP2P14621 99 aa3.27□□□□□ -1.89
SSBP1-212ENST00000489378 MUC5BQ9HC84 5762 aaPredicted RBP3.23□□□□□ -1.89
SSBP1-212ENST00000489378 KRTAP19-5Q3LI72 72 aa3.22□□□□□ -1.89
SSBP1-212ENST00000489378 MT1LQ93083 61 aa3.19□□□□□ -1.9
SSBP1-212ENST00000489378 A0A1B0GU69 56 aa3.19□□□□□ -1.9
SSBP1-212ENST00000489378 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
SSBP1-212ENST00000489378 SYNE1Q8NF91 8797 aaKnown RBP3.13□□□□□ -1.91
SSBP1-212ENST00000489378 KRTAP13-4Q3LI77 160 aa3.11□□□□□ -1.91
SSBP1-212ENST00000489378 A0A0D9SG42 100 aa3.1□□□□□ -1.91
SSBP1-212ENST00000489378 KRTAP12-4P60329 112 aa3.09□□□□□ -1.92
SSBP1-212ENST00000489378 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
SSBP1-212ENST00000489378 C10orf95Q9H7T3 257 aa2.95□□□□□ -1.94
SSBP1-212ENST00000489378 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
SSBP1-212ENST00000489378 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
SSBP1-212ENST00000489378 KRTAP12-1P59990 96 aa2.93□□□□□ -1.94
SSBP1-212ENST00000489378 KRTAP12-3P60328 96 aa2.76□□□□□ -1.97
SSBP1-212ENST00000489378 KRTAP6-1Q3LI64 71 aa2.74□□□□□ -1.97
SSBP1-212ENST00000489378 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.98
SSBP1-212ENST00000489378 MT1AP04731 61 aa2.69□□□□□ -1.98
SSBP1-212ENST00000489378 TNP1P09430 55 aa2.69□□□□□ -1.98
SSBP1-212ENST00000489378 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
SSBP1-212ENST00000489378 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
SSBP1-212ENST00000489378 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
SSBP1-212ENST00000489378 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
SSBP1-212ENST00000489378 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
SSBP1-212ENST00000489378 PRM1P04553 51 aa1.54□□□□□ -2.16
SSBP1-212ENST00000489378 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 11.9 ms