RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 ABCA13Q86UQ4 5058 aa-1.1□□□□□ -2.58
XRN1-213ENST00000489241 TOMM5Q8N4H5 51 aa-1.1□□□□□ -2.59
XRN1-213ENST00000489241 IQGAP2Q13576 1575 aa-1.12□□□□□ -2.59
XRN1-213ENST00000489241 PRUNE2Q8WUY3 3088 aa-1.12□□□□□ -2.59
XRN1-213ENST00000489241 TOMM7Q9P0U1 55 aa-1.12□□□□□ -2.59
XRN1-213ENST00000489241 CFAP54Q96N23 3096 aa-1.13□□□□□ -2.59
XRN1-213ENST00000489241 ATMQ13315 3056 aa-1.16□□□□□ -2.6
XRN1-213ENST00000489241 KRTAP19-6Q3LI70 58 aa-1.18□□□□□ -2.6
XRN1-213ENST00000489241 MYO15AQ9UKN7 3530 aa-1.2□□□□□ -2.6
XRN1-213ENST00000489241 VPS13CQ709C8 3753 aa-1.2□□□□□ -2.6
XRN1-213ENST00000489241 FREM2Q5SZK8 3169 aa-1.22□□□□□ -2.6
XRN1-213ENST00000489241 RPL39P62891 51 aaKnown RBP-1.23□□□□□ -2.61
XRN1-213ENST00000489241 FRYLO94915 3013 aa-1.23□□□□□ -2.61
XRN1-213ENST00000489241 RPS29P62273 56 aaKnown RBP-1.24□□□□□ -2.61
XRN1-213ENST00000489241 LINC01590Q5TEZ4 76 aa-1.24□□□□□ -2.61
XRN1-213ENST00000489241 CEP250Q9BV73 2442 aa-1.24□□□□□ -2.61
XRN1-213ENST00000489241 SAMD9LQ8IVG5 1584 aa-1.25□□□□□ -2.61
XRN1-213ENST00000489241 MT1FP04733 61 aa-1.26□□□□□ -2.61
XRN1-213ENST00000489241 ATP7AQ04656 1500 aa-1.27□□□□□ -2.61
XRN1-213ENST00000489241 DUOX1Q9NRD9 1551 aa-1.3□□□□□ -2.62
XRN1-213ENST00000489241 RHPN1-AS1Q9BWJ2 59 aa-1.31□□□□□ -2.62
XRN1-213ENST00000489241 DMDP11532 3685 aa-1.32□□□□□ -2.62
XRN1-213ENST00000489241 RPL39LQ96EH5 51 aaKnown RBP-1.33□□□□□ -2.62
XRN1-213ENST00000489241 PCNTO95613 3336 aa-1.34□□□□□ -2.62
XRN1-213ENST00000489241 CEP350Q5VT06 3117 aa-1.35□□□□□ -2.62
XRN1-213ENST00000489241 A0A096LNI7 61 aa-1.38□□□□□ -2.63
XRN1-213ENST00000489241 BOD1L1Q8NFC6 3051 aa-1.41□□□□□ -2.64
XRN1-213ENST00000489241 DEFB133Q30KQ1 61 aa-1.41□□□□□ -2.64
XRN1-213ENST00000489241 WDFY3Q8IZQ1 3526 aa-1.41□□□□□ -2.64
XRN1-213ENST00000489241 TOP2AP11388 1531 aaKnown RBP-1.41□□□□□ -2.64
XRN1-213ENST00000489241 MROH2BQ7Z745 1585 aa-1.42□□□□□ -2.64
XRN1-213ENST00000489241 DNAH12Q6ZR08 3092 aa-1.43□□□□□ -2.64
XRN1-213ENST00000489241 WDFY4Q6ZS81 3184 aa-1.44□□□□□ -2.64
XRN1-213ENST00000489241 HTN1P15515 57 aa-1.44□□□□□ -2.64
XRN1-213ENST00000489241 DEFB104AQ8WTQ1 72 aa-1.45□□□□□ -2.64
XRN1-213ENST00000489241 SZT2Q5T011 3432 aa-1.46□□□□□ -2.64
XRN1-213ENST00000489241 MUC3AQ02505 3323 aa-1.49□□□□□ -2.65
XRN1-213ENST00000489241 TTTY10Q9BZA0 68 aa-1.5□□□□□ -2.65
XRN1-213ENST00000489241 SPEGQ15772 3267 aa-1.51□□□□□ -2.65
XRN1-213ENST00000489241 XIRP2A4UGR9 3374 aa-1.53□□□□□ -2.65
XRN1-213ENST00000489241 CENPEQ02224 2701 aa-1.54□□□□□ -2.66
XRN1-213ENST00000489241 MKI67P46013 3256 aaKnown RBP-1.55□□□□□ -2.66
XRN1-213ENST00000489241 CD52P31358 61 aa-1.56□□□□□ -2.66
XRN1-213ENST00000489241 DEFB124Q8NES8 71 aa-1.58□□□□□ -2.66
XRN1-213ENST00000489241 EP400Q96L91 3159 aa-1.63□□□□□ -2.67
XRN1-213ENST00000489241 DCHS1Q96JQ0 3298 aa-1.64□□□□□ -2.67
XRN1-213ENST00000489241 SNRPGP62308 76 aaKnown RBP-1.64□□□□□ -2.67
XRN1-213ENST00000489241 GCC2Q8IWJ2 1684 aa-1.66□□□□□ -2.68
XRN1-213ENST00000489241 USP34Q70CQ2 3546 aa-1.67□□□□□ -2.68
XRN1-213ENST00000489241 H3BUX3 64 aa-1.69□□□□□ -2.68
XRN1-213ENST00000489241 UNC80Q8N2C7 3258 aa-1.7□□□□□ -2.68
XRN1-213ENST00000489241 LOC400499M0QZD8 3231 aa-1.7□□□□□ -2.68
XRN1-213ENST00000489241 K7EIM0 57 aa-1.71□□□□□ -2.68
XRN1-213ENST00000489241 ARHGAP5-AS1Q96IT6 56 aa-1.75□□□□□ -2.69
XRN1-213ENST00000489241 CFAP47Q6ZTR5 3102 aa-1.77□□□□□ -2.69
XRN1-213ENST00000489241 ASPMQ8IZT6 3477 aa-1.78□□□□□ -2.69
XRN1-213ENST00000489241 PRCDQ00LT1 54 aa-1.79□□□□□ -2.7
XRN1-213ENST00000489241 DNAH14Q0VDD8 3507 aa-1.8□□□□□ -2.7
XRN1-213ENST00000489241 KRTAP19-2Q3LHN2 52 aa-1.8□□□□□ -2.7
XRN1-213ENST00000489241 LINC01556Q5JQF7 62 aa-1.82□□□□□ -2.7
XRN1-213ENST00000489241 BRCA2P51587 3418 aa-1.9□□□□□ -2.71
XRN1-213ENST00000489241 TMEM167AQ8TBQ9 72 aa-1.97□□□□□ -2.72
XRN1-213ENST00000489241 H3BSH0 61 aa-1.98□□□□□ -2.73
XRN1-213ENST00000489241 A0A096LPF7 62 aa-2□□□□□ -2.73
XRN1-213ENST00000489241 APELAP0DMC3 54 aa-2□□□□□ -2.73
XRN1-213ENST00000489241 VCANP13611 3396 aa-2.01□□□□□ -2.73
XRN1-213ENST00000489241 CENPFP49454 3210 aa-2.04□□□□□ -2.74
XRN1-213ENST00000489241 RPL39P5Q59GN2 51 aa-2.07□□□□□ -2.74
XRN1-213ENST00000489241 CDH23Q9H251 3354 aa-2.11□□□□□ -2.75
XRN1-213ENST00000489241 DEFB108AA8MXU0 73 aa-2.12□□□□□ -2.75
XRN1-213ENST00000489241 VPS13AQ96RL7 3174 aa-2.18□□□□□ -2.76
XRN1-213ENST00000489241 HTN3P15516 51 aa-2.24□□□□□ -2.77
XRN1-213ENST00000489241 Q9Y3F1 56 aa-2.31□□□□□ -2.78
XRN1-213ENST00000489241 UTRNP46939 3433 aa-2.32□□□□□ -2.78
XRN1-213ENST00000489241 GOLGB1Q14789 3259 aaKnown RBP-2.51□□□□□ -2.81
XRN1-213ENST00000489241 DEFB108BQ8NET1 73 aa-2.54□□□□□ -2.82
XRN1-213ENST00000489241 COX14Q96I36 57 aa-2.54□□□□□ -2.82
XRN1-213ENST00000489241 STATHP02808 62 aa-2.84□□□□□ -2.86
Retrieved 78 of 20,778 RNA–protein pairs in 73.4 ms