RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 A0A0D9SG42 100 aa1.03□□□□□ -2.24
UBR3-211ENST00000487689 CMC2Q9NRP2 79 aa1.03□□□□□ -2.24
UBR3-211ENST00000487689 ABRACLQ9P1F3 81 aa1.03□□□□□ -2.24
UBR3-211ENST00000487689 H3BVH4 76 aa1.02□□□□□ -2.25
UBR3-211ENST00000487689 COX7BP24311 80 aa1.02□□□□□ -2.25
UBR3-211ENST00000487689 NREPQ16612 68 aa1□□□□□ -2.25
UBR3-211ENST00000487689 KRTAP19-8Q3LI54 63 aa1□□□□□ -2.25
UBR3-211ENST00000487689 ATXN8Q156A1 80 aa0.99□□□□□ -2.25
UBR3-211ENST00000487689 CRIPTQ9P021 101 aa0.99□□□□□ -2.25
UBR3-211ENST00000487689 C9orf92A6NGG3 77 aa0.98□□□□□ -2.25
UBR3-211ENST00000487689 GNG13Q9P2W3 67 aa0.98□□□□□ -2.25
UBR3-211ENST00000487689 SPINK1P00995 79 aa0.97□□□□□ -2.25
UBR3-211ENST00000487689 CLPSL2Q6UWE3 100 aa0.97□□□□□ -2.25
UBR3-211ENST00000487689 Q8IZM0 81 aa0.97□□□□□ -2.25
UBR3-211ENST00000487689 I3L3M4 83 aa0.96□□□□□ -2.26
UBR3-211ENST00000487689 RPS29P62273 56 aaKnown RBP0.96□□□□□ -2.26
UBR3-211ENST00000487689 K7EQZ3 153 aa0.95□□□□□ -2.26
UBR3-211ENST00000487689 C3orf79P0CE67 100 aa0.95□□□□□ -2.26
UBR3-211ENST00000487689 FXYD6-FXYD2A0A087WZ82 144 aa0.94□□□□□ -2.26
UBR3-211ENST00000487689 ARHGAP5-AS1Q96IT6 56 aa0.94□□□□□ -2.26
UBR3-211ENST00000487689 MRPL34Q9BQ48 92 aaKnown RBP0.91□□□□□ -2.26
UBR3-211ENST00000487689 SPRR2GQ9BYE4 73 aa0.91□□□□□ -2.26
UBR3-211ENST00000487689 UBL5Q9BZL1 73 aa0.91□□□□□ -2.26
UBR3-211ENST00000487689 KRTAP19-3Q7Z4W3 81 aa0.9□□□□□ -2.27
UBR3-211ENST00000487689 SNRPGP15A8MWD9 76 aa0.89□□□□□ -2.27
UBR3-211ENST00000487689 MT1XP80297 61 aa0.89□□□□□ -2.27
UBR3-211ENST00000487689 LINC01549A6NIU2 74 aa0.88□□□□□ -2.27
UBR3-211ENST00000487689 SPRR1AP35321 89 aa0.87□□□□□ -2.27
UBR3-211ENST00000487689 KCNQ1DNQ9H478 68 aa0.87□□□□□ -2.27
UBR3-211ENST00000487689 PHGR1C9JFL3 82 aa0.85□□□□□ -2.27
UBR3-211ENST00000487689 SPRR1BP22528 89 aa0.85□□□□□ -2.27
UBR3-211ENST00000487689 CDKN2A-AS1Q9UH64 79 aa0.85□□□□□ -2.27
UBR3-211ENST00000487689 ETDCA0A1B0GVM5 59 aa0.83□□□□□ -2.28
UBR3-211ENST00000487689 PRLHP81277 87 aa0.83□□□□□ -2.28
UBR3-211ENST00000487689 DEFB105AQ8NG35 78 aa0.83□□□□□ -2.28
UBR3-211ENST00000487689 K7EMI3 77 aa0.82□□□□□ -2.28
UBR3-211ENST00000487689 MT1EP04732 61 aa0.82□□□□□ -2.28
UBR3-211ENST00000487689 SERF2P84101 59 aa0.82□□□□□ -2.28
UBR3-211ENST00000487689 KRTAP19-7Q3SYF9 63 aa0.82□□□□□ -2.28
UBR3-211ENST00000487689 C6orf48Q9UBA6 75 aa0.82□□□□□ -2.28
UBR3-211ENST00000487689 MT1GP13640 62 aa0.81□□□□□ -2.28
UBR3-211ENST00000487689 MT1MQ8N339 61 aa0.81□□□□□ -2.28
UBR3-211ENST00000487689 NMES1Q9C002 83 aa0.8□□□□□ -2.28
UBR3-211ENST00000487689 H1FX-AS1Q4G0G2 97 aa0.79□□□□□ -2.28
UBR3-211ENST00000487689 FCER1GP30273 86 aa0.78□□□□□ -2.28
UBR3-211ENST00000487689 FXYD6Q9H0Q3 95 aa0.78□□□□□ -2.28
UBR3-211ENST00000487689 H0YAA0 97 aa0.77□□□□□ -2.29
UBR3-211ENST00000487689 NDUFA1O15239 70 aa0.77□□□□□ -2.29
UBR3-211ENST00000487689 CRIP1P50238 77 aa0.77□□□□□ -2.29
UBR3-211ENST00000487689 WFDC13Q8IUB5 93 aa0.77□□□□□ -2.29
UBR3-211ENST00000487689 LINC00158P58513 81 aa0.76□□□□□ -2.29
UBR3-211ENST00000487689 M0QY20 66 aa0.73□□□□□ -2.29
UBR3-211ENST00000487689 IGIPA6NJ69 53 aa0.72□□□□□ -2.29
UBR3-211ENST00000487689 MT1LQ93083 61 aa0.7□□□□□ -2.3
UBR3-211ENST00000487689 IAPPP10997 89 aa0.69□□□□□ -2.3
UBR3-211ENST00000487689 H0YGX0 51 aa0.68□□□□□ -2.3
UBR3-211ENST00000487689 PLNP26678 52 aa0.68□□□□□ -2.3
UBR3-211ENST00000487689 KRTAP6-2Q3LI66 62 aa0.67□□□□□ -2.3
UBR3-211ENST00000487689 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
UBR3-211ENST00000487689 TMEM167BQ9NRX6 74 aa0.66□□□□□ -2.3
UBR3-211ENST00000487689 KRTAP19-5Q3LI72 72 aa0.63□□□□□ -2.31
UBR3-211ENST00000487689 KRTAP6-1Q3LI64 71 aa0.62□□□□□ -2.31
UBR3-211ENST00000487689 RPL39LQ96EH5 51 aaKnown RBP0.61□□□□□ -2.31
UBR3-211ENST00000487689 LINC00308Q8TCZ7 52 aa0.59□□□□□ -2.31
UBR3-211ENST00000487689 SMIM27A0A1W2PRY6 76 aa0.58□□□□□ -2.32
UBR3-211ENST00000487689 LINC01546A6NGU7 62 aa0.58□□□□□ -2.32
UBR3-211ENST00000487689 POLR2KP53803 58 aaKnown RBP0.58□□□□□ -2.32
UBR3-211ENST00000487689 TOMM7Q9P0U1 55 aa0.58□□□□□ -2.32
UBR3-211ENST00000487689 MT1AP04731 61 aa0.57□□□□□ -2.32
UBR3-211ENST00000487689 TOMM5Q8N4H5 51 aa0.55□□□□□ -2.32
UBR3-211ENST00000487689 RPL39P62891 51 aaKnown RBP0.54□□□□□ -2.32
UBR3-211ENST00000487689 S4R3F8 94 aa0.54□□□□□ -2.32
UBR3-211ENST00000487689 PRM1P04553 51 aa0.51□□□□□ -2.33
UBR3-211ENST00000487689 SMIM2Q9BVW6 85 aa0.48□□□□□ -2.33
UBR3-211ENST00000487689 IGLV5-48A0A075B6I7 105 aa0.47□□□□□ -2.33
UBR3-211ENST00000487689 M0QZ58 72 aa0.39□□□□□ -2.35
UBR3-211ENST00000487689 MMP24-AS1A0A0U1RRL7 71 aa0.37□□□□□ -2.35
UBR3-211ENST00000487689 TNP1P09430 55 aa0.3□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 153.4 ms