RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 KRTAP5-7Q6L8G8 165 aa4.95□□□□□ -1.62
TRIM56-204ENST00000487252 P0C880 135 aa4.94□□□□□ -1.62
TRIM56-204ENST00000487252 HMCN1Q96RW7 5635 aa4.94□□□□□ -1.62
TRIM56-204ENST00000487252 KRTAP13-4Q3LI77 160 aa4.93□□□□□ -1.62
TRIM56-204ENST00000487252 KRTAP12-2P59991 146 aa4.92□□□□□ -1.62
TRIM56-204ENST00000487252 ADM2Q7Z4H4 148 aa4.91□□□□□ -1.62
TRIM56-204ENST00000487252 H3BS24 57 aa4.89□□□□□ -1.63
TRIM56-204ENST00000487252 MT1XP80297 61 aa4.88□□□□□ -1.63
TRIM56-204ENST00000487252 K7ERS5 55 aa4.86□□□□□ -1.63
TRIM56-204ENST00000487252 M0QZ58 72 aa4.85□□□□□ -1.63
TRIM56-204ENST00000487252 PRAC1Q96KF2 57 aa4.84□□□□□ -1.63
TRIM56-204ENST00000487252 PRO2289Q9P1D8 64 aa4.84□□□□□ -1.63
TRIM56-204ENST00000487252 A0A0D9SG42 100 aa4.8□□□□□ -1.64
TRIM56-204ENST00000487252 KRTAP12-1P59990 96 aa4.77□□□□□ -1.65
TRIM56-204ENST00000487252 ROMO1P60602 79 aa4.75□□□□□ -1.65
TRIM56-204ENST00000487252 CRIPTQ9P021 101 aa4.74□□□□□ -1.65
TRIM56-204ENST00000487252 MT4P47944 62 aa4.73□□□□□ -1.65
TRIM56-204ENST00000487252 SPRR5A0A1B0GTR4 108 aa4.72□□□□□ -1.65
TRIM56-204ENST00000487252 KRTAP25-1Q3LHN0 102 aa4.7□□□□□ -1.66
TRIM56-204ENST00000487252 R4GN34 69 aa4.68□□□□□ -1.66
TRIM56-204ENST00000487252 SPINT4Q6UDR6 99 aa4.66□□□□□ -1.66
TRIM56-204ENST00000487252 LINC01554Q52M75 96 aa4.65□□□□□ -1.67
TRIM56-204ENST00000487252 KRTAP10-12P60413 245 aa4.63□□□□□ -1.67
TRIM56-204ENST00000487252 KRTAP10-7P60409 375 aaPredicted RBP4.61□□□□□ -1.67
TRIM56-204ENST00000487252 KRTAP5-4Q6L8H1 288 aa4.54□□□□□ -1.68
TRIM56-204ENST00000487252 PLAC4Q8WY50 150 aa4.52□□□□□ -1.69
TRIM56-204ENST00000487252 C10orf95Q9H7T3 257 aa4.51□□□□□ -1.69
TRIM56-204ENST00000487252 KRTAP19-3Q7Z4W3 81 aa4.48□□□□□ -1.69
TRIM56-204ENST00000487252 CAMK2N1Q7Z7J9 78 aa4.41□□□□□ -1.7
TRIM56-204ENST00000487252 KRTAP19-7Q3SYF9 63 aa4.38□□□□□ -1.71
TRIM56-204ENST00000487252 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.38□□□□□ -1.71
TRIM56-204ENST00000487252 MT1EP04732 61 aa4.36□□□□□ -1.71
TRIM56-204ENST00000487252 AHNAKQ09666 5890 aaKnown RBP4.36□□□□□ -1.71
TRIM56-204ENST00000487252 PP632Q6XCG6 107 aa4.33□□□□□ -1.72
TRIM56-204ENST00000487252 KRTAP23-1A1A580 65 aa4.31□□□□□ -1.72
TRIM56-204ENST00000487252 MUC5ACP98088 5654 aa4.3□□□□□ -1.72
TRIM56-204ENST00000487252 MT1GP13640 62 aa4.29□□□□□ -1.72
TRIM56-204ENST00000487252 KRTAP20-2Q3LI61 65 aa4.29□□□□□ -1.72
TRIM56-204ENST00000487252 TNP1P09430 55 aa4.27□□□□□ -1.73
TRIM56-204ENST00000487252 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
TRIM56-204ENST00000487252 KRTAP5-11Q6L8G4 156 aa4.21□□□□□ -1.74
TRIM56-204ENST00000487252 MT1MQ8N339 61 aa4.2□□□□□ -1.74
TRIM56-204ENST00000487252 MUC5BQ9HC84 5762 aaPredicted RBP4.18□□□□□ -1.74
TRIM56-204ENST00000487252 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
TRIM56-204ENST00000487252 KRTAP5-8O75690 187 aa4.06□□□□□ -1.76
TRIM56-204ENST00000487252 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
TRIM56-204ENST00000487252 MT1LQ93083 61 aa4.03□□□□□ -1.76
TRIM56-204ENST00000487252 KRTAP19-5Q3LI72 72 aa4.01□□□□□ -1.77
TRIM56-204ENST00000487252 KRTAP12-4P60329 112 aa4□□□□□ -1.77
TRIM56-204ENST00000487252 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
TRIM56-204ENST00000487252 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
TRIM56-204ENST00000487252 KRTAP12-3P60328 96 aa3.9□□□□□ -1.79
TRIM56-204ENST00000487252 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
TRIM56-204ENST00000487252 LUZP6Q538Z0 58 aa3.85□□□□□ -1.79
TRIM56-204ENST00000487252 KRTAP5-2Q701N4 177 aa3.85□□□□□ -1.79
TRIM56-204ENST00000487252 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
TRIM56-204ENST00000487252 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
TRIM56-204ENST00000487252 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
TRIM56-204ENST00000487252 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
TRIM56-204ENST00000487252 LCE3CQ5T5A8 94 aa3.68□□□□□ -1.82
TRIM56-204ENST00000487252 A0A0A0MQY5 61 aa3.54□□□□□ -1.84
TRIM56-204ENST00000487252 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
TRIM56-204ENST00000487252 KRTAP6-1Q3LI64 71 aa3.44□□□□□ -1.86
TRIM56-204ENST00000487252 KRTAP6-2Q3LI66 62 aa3.44□□□□□ -1.86
TRIM56-204ENST00000487252 MT1AP04731 61 aa3.41□□□□□ -1.86
TRIM56-204ENST00000487252 INE1O15225 51 aa3.32□□□□□ -1.88
TRIM56-204ENST00000487252 MT3P25713 68 aa3.13□□□□□ -1.91
TRIM56-204ENST00000487252 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
TRIM56-204ENST00000487252 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
TRIM56-204ENST00000487252 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
TRIM56-204ENST00000487252 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
TRIM56-204ENST00000487252 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
TRIM56-204ENST00000487252 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
TRIM56-204ENST00000487252 PRM1P04553 51 aa2.48□□□□□ -2.01
TRIM56-204ENST00000487252 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
TRIM56-204ENST00000487252 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
TRIM56-204ENST00000487252 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
TRIM56-204ENST00000487252 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 74.3 ms