RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 KRTAP5-7Q6L8G8 165 aa4.95□□□□□ -1.62
TRIM56-204ENST00000487252 P0C880 135 aa4.94□□□□□ -1.62
TRIM56-204ENST00000487252 HMCN1Q96RW7 5635 aa4.94□□□□□ -1.62
TRIM56-204ENST00000487252 KRTAP13-4Q3LI77 160 aa4.93□□□□□ -1.62
TRIM56-204ENST00000487252 KRTAP12-2P59991 146 aa4.92□□□□□ -1.62
TRIM56-204ENST00000487252 ADM2Q7Z4H4 148 aa4.91□□□□□ -1.62
TRIM56-204ENST00000487252 H3BS24 57 aa4.89□□□□□ -1.63
TRIM56-204ENST00000487252 MT1XP80297 61 aa4.88□□□□□ -1.63
TRIM56-204ENST00000487252 K7ERS5 55 aa4.86□□□□□ -1.63
TRIM56-204ENST00000487252 M0QZ58 72 aa4.85□□□□□ -1.63
TRIM56-204ENST00000487252 PRAC1Q96KF2 57 aa4.84□□□□□ -1.63
TRIM56-204ENST00000487252 PRO2289Q9P1D8 64 aa4.84□□□□□ -1.63
TRIM56-204ENST00000487252 A0A0D9SG42 100 aa4.8□□□□□ -1.64
TRIM56-204ENST00000487252 KRTAP12-1P59990 96 aa4.77□□□□□ -1.65
TRIM56-204ENST00000487252 ROMO1P60602 79 aa4.75□□□□□ -1.65
TRIM56-204ENST00000487252 CRIPTQ9P021 101 aa4.74□□□□□ -1.65
TRIM56-204ENST00000487252 MT4P47944 62 aa4.73□□□□□ -1.65
TRIM56-204ENST00000487252 SPRR5A0A1B0GTR4 108 aa4.72□□□□□ -1.65
TRIM56-204ENST00000487252 KRTAP25-1Q3LHN0 102 aa4.7□□□□□ -1.66
TRIM56-204ENST00000487252 R4GN34 69 aa4.68□□□□□ -1.66
TRIM56-204ENST00000487252 SPINT4Q6UDR6 99 aa4.66□□□□□ -1.66
TRIM56-204ENST00000487252 LINC01554Q52M75 96 aa4.65□□□□□ -1.67
TRIM56-204ENST00000487252 KRTAP10-12P60413 245 aa4.63□□□□□ -1.67
TRIM56-204ENST00000487252 KRTAP10-7P60409 375 aaPredicted RBP4.61□□□□□ -1.67
TRIM56-204ENST00000487252 KRTAP5-4Q6L8H1 288 aa4.54□□□□□ -1.68
TRIM56-204ENST00000487252 PLAC4Q8WY50 150 aa4.52□□□□□ -1.69
TRIM56-204ENST00000487252 C10orf95Q9H7T3 257 aa4.51□□□□□ -1.69
TRIM56-204ENST00000487252 KRTAP19-3Q7Z4W3 81 aa4.48□□□□□ -1.69
TRIM56-204ENST00000487252 CAMK2N1Q7Z7J9 78 aa4.41□□□□□ -1.7
TRIM56-204ENST00000487252 KRTAP19-7Q3SYF9 63 aa4.38□□□□□ -1.71
TRIM56-204ENST00000487252 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.38□□□□□ -1.71
TRIM56-204ENST00000487252 MT1EP04732 61 aa4.36□□□□□ -1.71
TRIM56-204ENST00000487252 AHNAKQ09666 5890 aaKnown RBP4.36□□□□□ -1.71
TRIM56-204ENST00000487252 PP632Q6XCG6 107 aa4.33□□□□□ -1.72
TRIM56-204ENST00000487252 KRTAP23-1A1A580 65 aa4.31□□□□□ -1.72
TRIM56-204ENST00000487252 MUC5ACP98088 5654 aa4.3□□□□□ -1.72
TRIM56-204ENST00000487252 MT1GP13640 62 aa4.29□□□□□ -1.72
TRIM56-204ENST00000487252 KRTAP20-2Q3LI61 65 aa4.29□□□□□ -1.72
TRIM56-204ENST00000487252 TNP1P09430 55 aa4.27□□□□□ -1.73
TRIM56-204ENST00000487252 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
TRIM56-204ENST00000487252 KRTAP5-11Q6L8G4 156 aa4.21□□□□□ -1.74
TRIM56-204ENST00000487252 MT1MQ8N339 61 aa4.2□□□□□ -1.74
TRIM56-204ENST00000487252 MUC5BQ9HC84 5762 aaPredicted RBP4.18□□□□□ -1.74
TRIM56-204ENST00000487252 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
TRIM56-204ENST00000487252 KRTAP5-8O75690 187 aa4.06□□□□□ -1.76
TRIM56-204ENST00000487252 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
TRIM56-204ENST00000487252 MT1LQ93083 61 aa4.03□□□□□ -1.76
TRIM56-204ENST00000487252 KRTAP19-5Q3LI72 72 aa4.01□□□□□ -1.77
TRIM56-204ENST00000487252 KRTAP12-4P60329 112 aa4□□□□□ -1.77
TRIM56-204ENST00000487252 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
TRIM56-204ENST00000487252 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
TRIM56-204ENST00000487252 KRTAP12-3P60328 96 aa3.9□□□□□ -1.79
TRIM56-204ENST00000487252 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
TRIM56-204ENST00000487252 LUZP6Q538Z0 58 aa3.85□□□□□ -1.79
TRIM56-204ENST00000487252 KRTAP5-2Q701N4 177 aa3.85□□□□□ -1.79
TRIM56-204ENST00000487252 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
TRIM56-204ENST00000487252 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
TRIM56-204ENST00000487252 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
TRIM56-204ENST00000487252 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
TRIM56-204ENST00000487252 LCE3CQ5T5A8 94 aa3.68□□□□□ -1.82
TRIM56-204ENST00000487252 A0A0A0MQY5 61 aa3.54□□□□□ -1.84
TRIM56-204ENST00000487252 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
TRIM56-204ENST00000487252 KRTAP6-1Q3LI64 71 aa3.44□□□□□ -1.86
TRIM56-204ENST00000487252 KRTAP6-2Q3LI66 62 aa3.44□□□□□ -1.86
TRIM56-204ENST00000487252 MT1AP04731 61 aa3.41□□□□□ -1.86
TRIM56-204ENST00000487252 INE1O15225 51 aa3.32□□□□□ -1.88
TRIM56-204ENST00000487252 MT3P25713 68 aa3.13□□□□□ -1.91
TRIM56-204ENST00000487252 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
TRIM56-204ENST00000487252 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
TRIM56-204ENST00000487252 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
TRIM56-204ENST00000487252 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
TRIM56-204ENST00000487252 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
TRIM56-204ENST00000487252 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
TRIM56-204ENST00000487252 PRM1P04553 51 aa2.48□□□□□ -2.01
TRIM56-204ENST00000487252 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
TRIM56-204ENST00000487252 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
TRIM56-204ENST00000487252 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
TRIM56-204ENST00000487252 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 83.3 ms