RNA–Protein interactions for RNA: ENST00000486446.2

PUDP-204, Transcript of pseudouridine 5'-phosphatase, human

TSL 2

Gene PUDP, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUDP-204	ENST00000486446	KRTAP10-10	P60014	251 aa		3.42	□□□□□ -1.86
PUDP-204	ENST00000486446	KRTAP13-4	Q3LI77	160 aa		3.42	□□□□□ -1.86
PUDP-204	ENST00000486446	MT1F	P04733	61 aa		3.41	□□□□□ -1.86
PUDP-204	ENST00000486446		M0QZ58	72 aa		3.4	□□□□□ -1.87
PUDP-204	ENST00000486446	PRO2289	Q9P1D8	64 aa		3.35	□□□□□ -1.87
PUDP-204	ENST00000486446	KRTAP5-1	Q6L8H4	278 aa		3.33	□□□□□ -1.88
PUDP-204	ENST00000486446	KRTAP12-1	P59990	96 aa		3.32	□□□□□ -1.88
PUDP-204	ENST00000486446	MUC12	Q9UKN1	5478 aa		3.3	□□□□□ -1.88
PUDP-204	ENST00000486446	KRTAP12-2	P59991	146 aa		3.3	□□□□□ -1.88
PUDP-204	ENST00000486446		A0A0D9SG42	100 aa		3.29	□□□□□ -1.88
PUDP-204	ENST00000486446	SPINT4	Q6UDR6	99 aa		3.29	□□□□□ -1.88
PUDP-204	ENST00000486446	CRIPT	Q9P021	101 aa		3.27	□□□□□ -1.89
PUDP-204	ENST00000486446	KRTAP19-6	Q3LI70	58 aa		3.26	□□□□□ -1.89
PUDP-204	ENST00000486446		R4GN34	69 aa		3.26	□□□□□ -1.89
PUDP-204	ENST00000486446	KMT2D	O14686	5537 aa		3.24	□□□□□ -1.89
PUDP-204	ENST00000486446	KRTAP2-3	P0C7H8	128 aa		3.21	□□□□□ -1.9
PUDP-204	ENST00000486446	KRTAP2-4	Q9BYR9	128 aa		3.21	□□□□□ -1.9
PUDP-204	ENST00000486446	KRTAP5-4	Q6L8H1	288 aa		3.18	□□□□□ -1.9
PUDP-204	ENST00000486446	KRTAP4-4	Q9BYR3	166 aa		3.17	□□□□□ -1.9
PUDP-204	ENST00000486446	GPR98	Q8WXG9	6306 aa		3.17	□□□□□ -1.9
PUDP-204	ENST00000486446	LCE3E	Q5T5B0	92 aa		3.16	□□□□□ -1.9
PUDP-204	ENST00000486446	MDN1	Q9NU22	5596 aa		3.16	□□□□□ -1.9
PUDP-204	ENST00000486446	C10orf95	Q9H7T3	257 aa		3.15	□□□□□ -1.91
PUDP-204	ENST00000486446	SPRR2G	Q9BYE4	73 aa		3.14	□□□□□ -1.91
PUDP-204	ENST00000486446	MT1B	P07438	61 aa		3.13	□□□□□ -1.91
PUDP-204	ENST00000486446	INE1	O15225	51 aa		3.12	□□□□□ -1.91
PUDP-204	ENST00000486446	KRTAP19-8	Q3LI54	63 aa		3.12	□□□□□ -1.91
PUDP-204	ENST00000486446	PP632	Q6XCG6	107 aa		3.08	□□□□□ -1.92
PUDP-204	ENST00000486446	KRTAP2-1	Q9BYU5	128 aa		3.08	□□□□□ -1.92
PUDP-204	ENST00000486446	KRTAP5-9	P26371	169 aa		3.07	□□□□□ -1.92
PUDP-204	ENST00000486446	PLAC4	Q8WY50	150 aa		3.02	□□□□□ -1.93
PUDP-204	ENST00000486446	TNP1	P09430	55 aa		2.97	□□□□□ -1.93
PUDP-204	ENST00000486446	SPRR2E	P22531	72 aa		2.97	□□□□□ -1.93
PUDP-204	ENST00000486446	SPRR2B	P35325	72 aa		2.97	□□□□□ -1.93
PUDP-204	ENST00000486446	SPRR2A	P35326	72 aa		2.97	□□□□□ -1.93
PUDP-204	ENST00000486446	MT1X	P80297	61 aa		2.93	□□□□□ -1.94
PUDP-204	ENST00000486446	LCE3A	Q5TA76	89 aa		2.93	□□□□□ -1.94
PUDP-204	ENST00000486446	SPRR5	A0A1B0GTR4	108 aa		2.89	□□□□□ -1.95
PUDP-204	ENST00000486446	SPRR2F	Q96RM1	72 aa		2.89	□□□□□ -1.95
PUDP-204	ENST00000486446	SPRR2D	P22532	72 aa		2.87	□□□□□ -1.95
PUDP-204	ENST00000486446	KRTAP8-1	Q8IUC2	63 aa		2.87	□□□□□ -1.95
PUDP-204	ENST00000486446	KRTAP4-3	Q9BYR4	195 aa		2.85	□□□□□ -1.95
PUDP-204	ENST00000486446	OBSCN	Q5VST9	7968 aa		2.81	□□□□□ -1.96
PUDP-204	ENST00000486446	DST	Q03001	7570 aa	Known RBP	2.8	□□□□□ -1.96
PUDP-204	ENST00000486446	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.75	□□□□□ -1.97
PUDP-204	ENST00000486446	AHNAK2	Q8IVF2	5795 aa		2.71	□□□□□ -1.98
PUDP-204	ENST00000486446	HMCN1	Q96RW7	5635 aa		2.7	□□□□□ -1.98
PUDP-204	ENST00000486446	KRTAP12-3	P60328	96 aa		2.69	□□□□□ -1.98
PUDP-204	ENST00000486446	KRTAP5-10	Q6L8G5	202 aa		2.69	□□□□□ -1.98
PUDP-204	ENST00000486446	KRTAP5-7	Q6L8G8	165 aa		2.65	□□□□□ -1.99
PUDP-204	ENST00000486446	KRTAP19-7	Q3SYF9	63 aa		2.61	□□□□□ -1.99
PUDP-204	ENST00000486446	MT1E	P04732	61 aa		2.6	□□□□□ -1.99
PUDP-204	ENST00000486446	KRTAP5-2	Q701N4	177 aa		2.6	□□□□□ -1.99
PUDP-204	ENST00000486446	MT4	P47944	62 aa		2.58	□□□□□ -2
PUDP-204	ENST00000486446	KRTAP19-5	Q3LI72	72 aa		2.58	□□□□□ -2
PUDP-204	ENST00000486446	LCE1C	Q5T751	118 aa		2.58	□□□□□ -2
PUDP-204	ENST00000486446	LCE1B	Q5T7P3	118 aa		2.58	□□□□□ -2
PUDP-204	ENST00000486446	KRTAP19-3	Q7Z4W3	81 aa		2.58	□□□□□ -2
PUDP-204	ENST00000486446	LCE3D	Q9BYE3	92 aa		2.54	□□□□□ -2
PUDP-204	ENST00000486446	MT1G	P13640	62 aa		2.52	□□□□□ -2.01
PUDP-204	ENST00000486446	MT1M	Q8N339	61 aa		2.48	□□□□□ -2.01
PUDP-204	ENST00000486446	MT1L	Q93083	61 aa		2.48	□□□□□ -2.01
PUDP-204	ENST00000486446	AHNAK	Q09666	5890 aa	Known RBP	2.43	□□□□□ -2.02
PUDP-204	ENST00000486446	MUC5AC	P98088	5654 aa		2.33	□□□□□ -2.04
PUDP-204	ENST00000486446	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.3	□□□□□ -2.04
PUDP-204	ENST00000486446	KRTAP20-2	Q3LI61	65 aa		2.25	□□□□□ -2.05
PUDP-204	ENST00000486446	KRTAP12-4	P60329	112 aa		2.23	□□□□□ -2.05
PUDP-204	ENST00000486446	KRTAP5-8	O75690	187 aa		2.17	□□□□□ -2.06
PUDP-204	ENST00000486446	SYNE1	Q8NF91	8797 aa	Known RBP	2.14	□□□□□ -2.07
PUDP-204	ENST00000486446	MT1A	P04731	61 aa		2.12	□□□□□ -2.07
PUDP-204	ENST00000486446	KRTAP6-1	Q3LI64	71 aa		2.1	□□□□□ -2.07
PUDP-204	ENST00000486446	MUC19	Q7Z5P9	8384 aa		2.03	□□□□□ -2.08
PUDP-204	ENST00000486446	KRTAP6-2	Q3LI66	62 aa		2.02	□□□□□ -2.09
PUDP-204	ENST00000486446	KRTAP21-2	Q3LI59	83 aa		1.84	□□□□□ -2.11
PUDP-204	ENST00000486446	PRM1	P04553	51 aa		1.76	□□□□□ -2.13
PUDP-204	ENST00000486446	PHGR1	C9JFL3	82 aa		1.61	□□□□□ -2.15
PUDP-204	ENST00000486446	KRTAP21-1	Q3LI58	79 aa		1.22	□□□□□ -2.21
PUDP-204	ENST00000486446	MUC16	Q8WXI7	14507 aa		0.92	□□□□□ -2.26

Retrieved 78 of 20,778 RNA–protein pairs in 6.4 ms