RNA–Protein interactions for RNA: ENST00000484879.1

RB1-204, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-204ENST00000484879 VPS13DQ5THJ4 4388 aa0.75□□□□□ -2.29
RB1-204ENST00000484879 H3BNG1 76 aa0.75□□□□□ -2.29
RB1-204ENST00000484879 WFDC13Q8IUB5 93 aa0.75□□□□□ -2.29
RB1-204ENST00000484879 SMR3AQ99954 134 aa0.75□□□□□ -2.29
RB1-204ENST00000484879 STARD9Q9P2P6 4700 aa0.75□□□□□ -2.29
RB1-204ENST00000484879 DNAH5Q8TE73 4624 aa0.74□□□□□ -2.29
RB1-204ENST00000484879 USH2AO75445 5202 aa0.74□□□□□ -2.29
RB1-204ENST00000484879 DNAH11Q96DT5 4516 aa0.74□□□□□ -2.29
RB1-204ENST00000484879 A0A096LNI7 61 aa0.74□□□□□ -2.29
RB1-204ENST00000484879 MMP24-AS1A0A0U1RRL7 71 aa0.74□□□□□ -2.29
RB1-204ENST00000484879 SPRR1BP22528 89 aa0.74□□□□□ -2.29
RB1-204ENST00000484879 PRLHP81277 87 aa0.74□□□□□ -2.29
RB1-204ENST00000484879 VPS13BQ7Z7G8 4022 aa0.74□□□□□ -2.29
RB1-204ENST00000484879 MUC12Q9UKN1 5478 aa0.73□□□□□ -2.29
RB1-204ENST00000484879 PKHD1L1Q86WI1 4243 aa0.73□□□□□ -2.29
RB1-204ENST00000484879 PKD1P98161 4303 aa0.72□□□□□ -2.29
RB1-204ENST00000484879 SACSQ9NZJ4 4579 aa0.72□□□□□ -2.29
RB1-204ENST00000484879 H1FX-AS1Q4G0G2 97 aa0.72□□□□□ -2.29
RB1-204ENST00000484879 FAT3Q8TDW7 4589 aa0.71□□□□□ -2.3
RB1-204ENST00000484879 PKHD1P08F94 4074 aa0.71□□□□□ -2.3
RB1-204ENST00000484879 KRTAP2-3P0C7H8 128 aa0.71□□□□□ -2.3
RB1-204ENST00000484879 KRTAP2-4Q9BYR9 128 aa0.71□□□□□ -2.3
RB1-204ENST00000484879 APOBP04114 4563 aaKnown RBP0.7□□□□□ -2.3
RB1-204ENST00000484879 FAT2Q9NYQ8 4349 aa0.7□□□□□ -2.3
RB1-204ENST00000484879 APLNQ9ULZ1 77 aa0.7□□□□□ -2.3
RB1-204ENST00000484879 TNXBP22105 4242 aa0.7□□□□□ -2.3
RB1-204ENST00000484879 SPINK6Q6UWN8 80 aa0.69□□□□□ -2.3
RB1-204ENST00000484879 HSPG2P98160 4391 aa0.68□□□□□ -2.3
RB1-204ENST00000484879 LRP1BQ9NZR2 4599 aa0.67□□□□□ -2.3
RB1-204ENST00000484879 DYNC1H1Q14204 4646 aaKnown RBP0.67□□□□□ -2.3
RB1-204ENST00000484879 FAT1Q14517 4588 aa0.67□□□□□ -2.3
RB1-204ENST00000484879 MYCBP2O75592 4640 aa0.66□□□□□ -2.3
RB1-204ENST00000484879 LRP1Q07954 4544 aaKnown RBP0.65□□□□□ -2.3
RB1-204ENST00000484879 KRTAP19-3Q7Z4W3 81 aa0.65□□□□□ -2.31
RB1-204ENST00000484879 KRTAP2-1Q9BYU5 128 aa0.65□□□□□ -2.31
RB1-204ENST00000484879 FLGP20930 4061 aaPredicted RBP0.64□□□□□ -2.31
RB1-204ENST00000484879 SPINK1P00995 79 aa0.64□□□□□ -2.31
RB1-204ENST00000484879 RPS29P62273 56 aaKnown RBP0.64□□□□□ -2.31
RB1-204ENST00000484879 C9orf92A6NGG3 77 aa0.63□□□□□ -2.31
RB1-204ENST00000484879 SMR3BP02814 79 aaPredicted RBP0.6□□□□□ -2.31
RB1-204ENST00000484879 S4R3F8 94 aa0.6□□□□□ -2.31
RB1-204ENST00000484879 MUC17Q685J3 4493 aa0.59□□□□□ -2.31
RB1-204ENST00000484879 LRP2P98164 4655 aa0.58□□□□□ -2.32
RB1-204ENST00000484879 LPAP08519 4548 aa0.58□□□□□ -2.32
RB1-204ENST00000484879 M0QZ58 72 aa0.57□□□□□ -2.32
RB1-204ENST00000484879 MT1HL1P0DM35 61 aa0.56□□□□□ -2.32
RB1-204ENST00000484879 KRTAP19-2Q3LHN2 52 aa0.54□□□□□ -2.32
RB1-204ENST00000484879 TNP1P09430 55 aa0.51□□□□□ -2.33
RB1-204ENST00000484879 KRTAP21-1Q3LI58 79 aa0.5□□□□□ -2.33
RB1-204ENST00000484879 SPRR2GQ9BYE4 73 aa0.49□□□□□ -2.33
RB1-204ENST00000484879 PHGR1C9JFL3 82 aa0.48□□□□□ -2.33
RB1-204ENST00000484879 PRM1P04553 51 aa0.48□□□□□ -2.33
RB1-204ENST00000484879 KRTAP8-1Q8IUC2 63 aa0.48□□□□□ -2.33
RB1-204ENST00000484879 MT2AP02795 61 aa0.47□□□□□ -2.33
RB1-204ENST00000484879 MT1FP04733 61 aa0.47□□□□□ -2.33
RB1-204ENST00000484879 MT1XP80297 61 aa0.47□□□□□ -2.33
RB1-204ENST00000484879 KRTAP19-8Q3LI54 63 aa0.47□□□□□ -2.33
RB1-204ENST00000484879 SYNE1Q8NF91 8797 aaKnown RBP0.46□□□□□ -2.34
RB1-204ENST00000484879 MT1BP07438 61 aa0.46□□□□□ -2.34
RB1-204ENST00000484879 MT1HP80294 61 aa0.46□□□□□ -2.34
RB1-204ENST00000484879 M0R2T5 61 aa0.45□□□□□ -2.34
RB1-204ENST00000484879 KRTAP19-5Q3LI72 72 aa0.44□□□□□ -2.34
RB1-204ENST00000484879 MT1EP04732 61 aa0.41□□□□□ -2.34
RB1-204ENST00000484879 KRTAP19-7Q3SYF9 63 aa0.41□□□□□ -2.34
RB1-204ENST00000484879 MT1LQ93083 61 aa0.41□□□□□ -2.34
RB1-204ENST00000484879 SPRR2DP22532 72 aa0.4□□□□□ -2.35
RB1-204ENST00000484879 KRTAP19-6Q3LI70 58 aa0.39□□□□□ -2.35
RB1-204ENST00000484879 MT1MQ8N339 61 aa0.38□□□□□ -2.35
RB1-204ENST00000484879 MT1GP13640 62 aa0.37□□□□□ -2.35
RB1-204ENST00000484879 SPRR2BP35325 72 aa0.36□□□□□ -2.35
RB1-204ENST00000484879 MT1AP04731 61 aa0.35□□□□□ -2.35
RB1-204ENST00000484879 KRTAP6-1Q3LI64 71 aa0.34□□□□□ -2.36
RB1-204ENST00000484879 SPRR2FQ96RM1 72 aa0.33□□□□□ -2.36
RB1-204ENST00000484879 MT4P47944 62 aa0.32□□□□□ -2.36
RB1-204ENST00000484879 KRTAP6-2Q3LI66 62 aa0.32□□□□□ -2.36
RB1-204ENST00000484879 SPRR2EP22531 72 aa0.3□□□□□ -2.36
RB1-204ENST00000484879 SPRR2AP35326 72 aa0.3□□□□□ -2.36
RB1-204ENST00000484879 KRTAP20-2Q3LI61 65 aa0.25□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 57.4 ms