RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 PRLHP81277 87 aa1.95□□□□□ -2.1
UBR3-210ENST00000484596 Q8IZM0 81 aa1.95□□□□□ -2.1
UBR3-210ENST00000484596 TOMM7Q9P0U1 55 aa1.92□□□□□ -2.1
UBR3-210ENST00000484596 MUC12Q9UKN1 5478 aa1.92□□□□□ -2.1
UBR3-210ENST00000484596 LINC01546A6NGU7 62 aa1.91□□□□□ -2.1
UBR3-210ENST00000484596 SPRR1AP35321 89 aa1.91□□□□□ -2.1
UBR3-210ENST00000484596 UBL5Q9BZL1 73 aa1.91□□□□□ -2.1
UBR3-210ENST00000484596 CRIPTQ9P021 101 aa1.91□□□□□ -2.1
UBR3-210ENST00000484596 NEBP20929 6669 aa1.88□□□□□ -2.11
UBR3-210ENST00000484596 RPS29P62273 56 aaKnown RBP1.88□□□□□ -2.11
UBR3-210ENST00000484596 KCNQ1DNQ9H478 68 aa1.87□□□□□ -2.11
UBR3-210ENST00000484596 SPINK1P00995 79 aa1.86□□□□□ -2.11
UBR3-210ENST00000484596 C9orf92A6NGG3 77 aa1.84□□□□□ -2.11
UBR3-210ENST00000484596 MT2AP02795 61 aa1.82□□□□□ -2.12
UBR3-210ENST00000484596 SPRR1BP22528 89 aa1.82□□□□□ -2.12
UBR3-210ENST00000484596 C10orf95Q9H7T3 257 aa1.82□□□□□ -2.12
UBR3-210ENST00000484596 ETDCA0A1B0GVM5 59 aa1.81□□□□□ -2.12
UBR3-210ENST00000484596 MT1FP04733 61 aa1.81□□□□□ -2.12
UBR3-210ENST00000484596 LINC00158P58513 81 aa1.8□□□□□ -2.12
UBR3-210ENST00000484596 TP53AIP1Q9HCN2 124 aa1.8□□□□□ -2.12
UBR3-210ENST00000484596 MDN1Q9NU22 5596 aa1.79□□□□□ -2.12
UBR3-210ENST00000484596 K7EQZ3 153 aa1.78□□□□□ -2.12
UBR3-210ENST00000484596 M0R2T5 61 aa1.78□□□□□ -2.12
UBR3-210ENST00000484596 IGLV5-48A0A075B6I7 105 aa1.77□□□□□ -2.13
UBR3-210ENST00000484596 KRTAP19-6Q3LI70 58 aa1.76□□□□□ -2.13
UBR3-210ENST00000484596 COX6B2Q6YFQ2 88 aa1.76□□□□□ -2.13
UBR3-210ENST00000484596 KMT2DO14686 5537 aa1.76□□□□□ -2.13
UBR3-210ENST00000484596 LINC00308Q8TCZ7 52 aa1.75□□□□□ -2.13
UBR3-210ENST00000484596 MRPL34Q9BQ48 92 aaKnown RBP1.74□□□□□ -2.13
UBR3-210ENST00000484596 PLNP26678 52 aa1.73□□□□□ -2.13
UBR3-210ENST00000484596 DEFB105AQ8NG35 78 aa1.72□□□□□ -2.13
UBR3-210ENST00000484596 A0A0D9SG42 100 aa1.68□□□□□ -2.14
UBR3-210ENST00000484596 MT1BP07438 61 aa1.65□□□□□ -2.15
UBR3-210ENST00000484596 H0YAA0 97 aa1.64□□□□□ -2.15
UBR3-210ENST00000484596 GPR98Q8WXG9 6306 aa1.64□□□□□ -2.15
UBR3-210ENST00000484596 KRTAP20-1Q3LI63 56 aa1.63□□□□□ -2.15
UBR3-210ENST00000484596 H0YGX0 51 aa1.61□□□□□ -2.15
UBR3-210ENST00000484596 KRTAP19-8Q3LI54 63 aa1.59□□□□□ -2.15
UBR3-210ENST00000484596 H1FX-AS1Q4G0G2 97 aa1.59□□□□□ -2.15
UBR3-210ENST00000484596 WFDC13Q8IUB5 93 aa1.58□□□□□ -2.16
UBR3-210ENST00000484596 SPRR2GQ9BYE4 73 aa1.57□□□□□ -2.16
UBR3-210ENST00000484596 DSTQ03001 7570 aaKnown RBP1.56□□□□□ -2.16
UBR3-210ENST00000484596 KRTAP2-3P0C7H8 128 aa1.55□□□□□ -2.16
UBR3-210ENST00000484596 KRTAP2-4Q9BYR9 128 aa1.55□□□□□ -2.16
UBR3-210ENST00000484596 MMP24-AS1A0A0U1RRL7 71 aa1.53□□□□□ -2.16
UBR3-210ENST00000484596 SPRR2FQ96RM1 72 aa1.51□□□□□ -2.17
UBR3-210ENST00000484596 SPRR2EP22531 72 aa1.5□□□□□ -2.17
UBR3-210ENST00000484596 SPRR2BP35325 72 aa1.5□□□□□ -2.17
UBR3-210ENST00000484596 SPRR2AP35326 72 aa1.5□□□□□ -2.17
UBR3-210ENST00000484596 MT1XP80297 61 aa1.5□□□□□ -2.17
UBR3-210ENST00000484596 KRTAP2-1Q9BYU5 128 aa1.5□□□□□ -2.17
UBR3-210ENST00000484596 AHNAK2Q8IVF2 5795 aa1.5□□□□□ -2.17
UBR3-210ENST00000484596 KRTAP5-10Q6L8G5 202 aa1.46□□□□□ -2.18
UBR3-210ENST00000484596 SPRR2DP22532 72 aa1.45□□□□□ -2.18
UBR3-210ENST00000484596 S4R3F8 94 aa1.45□□□□□ -2.18
UBR3-210ENST00000484596 KRTAP8-1Q8IUC2 63 aa1.44□□□□□ -2.18
UBR3-210ENST00000484596 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
UBR3-210ENST00000484596 SYNE1Q8NF91 8797 aaKnown RBP1.38□□□□□ -2.19
UBR3-210ENST00000484596 KRTAP19-7Q3SYF9 63 aa1.36□□□□□ -2.19
UBR3-210ENST00000484596 MT1EP04732 61 aa1.33□□□□□ -2.2
UBR3-210ENST00000484596 KRTAP19-3Q7Z4W3 81 aa1.31□□□□□ -2.2
UBR3-210ENST00000484596 M0QZ58 72 aa1.29□□□□□ -2.2
UBR3-210ENST00000484596 MT4P47944 62 aa1.29□□□□□ -2.2
UBR3-210ENST00000484596 MT1MQ8N339 61 aa1.27□□□□□ -2.21
UBR3-210ENST00000484596 MUC5BQ9HC84 5762 aaPredicted RBP1.26□□□□□ -2.21
UBR3-210ENST00000484596 AHNAKQ09666 5890 aaKnown RBP1.24□□□□□ -2.21
UBR3-210ENST00000484596 MT1GP13640 62 aa1.24□□□□□ -2.21
UBR3-210ENST00000484596 KRTAP19-5Q3LI72 72 aa1.24□□□□□ -2.21
UBR3-210ENST00000484596 MT1LQ93083 61 aa1.24□□□□□ -2.21
UBR3-210ENST00000484596 KRTAP20-2Q3LI61 65 aa1.22□□□□□ -2.21
UBR3-210ENST00000484596 MUC5ACP98088 5654 aa1.2□□□□□ -2.22
UBR3-210ENST00000484596 KRTAP6-1Q3LI64 71 aa1.07□□□□□ -2.24
UBR3-210ENST00000484596 PRM1P04553 51 aa1.04□□□□□ -2.24
UBR3-210ENST00000484596 MT1AP04731 61 aa1.04□□□□□ -2.24
UBR3-210ENST00000484596 TNP1P09430 55 aa1.03□□□□□ -2.24
UBR3-210ENST00000484596 KRTAP6-2Q3LI66 62 aa1.03□□□□□ -2.24
UBR3-210ENST00000484596 KRTAP21-1Q3LI58 79 aa0.88□□□□□ -2.27
UBR3-210ENST00000484596 PHGR1C9JFL3 82 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 64.2 ms