RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 PRO0628Q9UI54 55 aa4.59□□□□□ -1.67
CDK5RAP2-217ENST00000484546 SPRR2EP22531 72 aa4.58□□□□□ -1.68
CDK5RAP2-217ENST00000484546 SPRR2BP35325 72 aa4.58□□□□□ -1.68
CDK5RAP2-217ENST00000484546 SPRR2AP35326 72 aa4.58□□□□□ -1.68
CDK5RAP2-217ENST00000484546 CDC42SE1Q9NRR8 79 aa4.58□□□□□ -1.68
CDK5RAP2-217ENST00000484546 MIR22HGQ0VDD5 57 aa4.54□□□□□ -1.68
CDK5RAP2-217ENST00000484546 LCE1AQ5T7P2 110 aa4.53□□□□□ -1.68
CDK5RAP2-217ENST00000484546 K7ERS5 55 aa4.5□□□□□ -1.69
CDK5RAP2-217ENST00000484546 KRTAP23-1A1A580 65 aa4.48□□□□□ -1.69
CDK5RAP2-217ENST00000484546 TNP1P09430 55 aa4.48□□□□□ -1.69
CDK5RAP2-217ENST00000484546 KRTAP2-3P0C7H8 128 aa4.44□□□□□ -1.7
CDK5RAP2-217ENST00000484546 KRTAP2-4Q9BYR9 128 aa4.44□□□□□ -1.7
CDK5RAP2-217ENST00000484546 C10orf95Q9H7T3 257 aa4.43□□□□□ -1.7
CDK5RAP2-217ENST00000484546 SPRR2DP22532 72 aa4.42□□□□□ -1.7
CDK5RAP2-217ENST00000484546 KRTAP19-7Q3SYF9 63 aa4.38□□□□□ -1.71
CDK5RAP2-217ENST00000484546 PMAIP1Q13794 54 aa4.35□□□□□ -1.71
CDK5RAP2-217ENST00000484546 MT1EP04732 61 aa4.34□□□□□ -1.71
CDK5RAP2-217ENST00000484546 KRTAP19-5Q3LI72 72 aa4.34□□□□□ -1.71
CDK5RAP2-217ENST00000484546 LCE3AQ5TA76 89 aa4.34□□□□□ -1.71
CDK5RAP2-217ENST00000484546 KRTAP2-2Q9BYT5 123 aa4.31□□□□□ -1.72
CDK5RAP2-217ENST00000484546 KRTAP2-1Q9BYU5 128 aa4.31□□□□□ -1.72
CDK5RAP2-217ENST00000484546 KRTAP25-1Q3LHN0 102 aa4.29□□□□□ -1.72
CDK5RAP2-217ENST00000484546 KRTAP19-3Q7Z4W3 81 aa4.29□□□□□ -1.72
CDK5RAP2-217ENST00000484546 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
CDK5RAP2-217ENST00000484546 PP632Q6XCG6 107 aa4.24□□□□□ -1.73
CDK5RAP2-217ENST00000484546 KTN1-AS1Q86SY8 53 aa4.24□□□□□ -1.73
CDK5RAP2-217ENST00000484546 MT1GP13640 62 aa4.21□□□□□ -1.74
CDK5RAP2-217ENST00000484546 KRTAP12-3P60328 96 aa4.19□□□□□ -1.74
CDK5RAP2-217ENST00000484546 MT1LQ93083 61 aa4.17□□□□□ -1.74
CDK5RAP2-217ENST00000484546 GPR98Q8WXG9 6306 aa4.16□□□□□ -1.74
CDK5RAP2-217ENST00000484546 ROMO1P60602 79 aa4.15□□□□□ -1.75
CDK5RAP2-217ENST00000484546 MT1MQ8N339 61 aa4.12□□□□□ -1.75
CDK5RAP2-217ENST00000484546 A0A0A0MQY5 61 aa4.09□□□□□ -1.75
CDK5RAP2-217ENST00000484546 PRAC1Q96KF2 57 aa4.08□□□□□ -1.76
CDK5RAP2-217ENST00000484546 DSTQ03001 7570 aaKnown RBP4.08□□□□□ -1.76
CDK5RAP2-217ENST00000484546 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
CDK5RAP2-217ENST00000484546 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
CDK5RAP2-217ENST00000484546 KRTAP5-4Q6L8H1 288 aa3.87□□□□□ -1.79
CDK5RAP2-217ENST00000484546 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
CDK5RAP2-217ENST00000484546 LCE3CQ5T5A8 94 aa3.86□□□□□ -1.79
CDK5RAP2-217ENST00000484546 MT4P47944 62 aa3.85□□□□□ -1.79
CDK5RAP2-217ENST00000484546 KRTAP5-5Q701N2 237 aaPredicted RBP3.77□□□□□ -1.81
CDK5RAP2-217ENST00000484546 AHNAK2Q8IVF2 5795 aa3.73□□□□□ -1.81
CDK5RAP2-217ENST00000484546 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
CDK5RAP2-217ENST00000484546 KRTAP5-10Q6L8G5 202 aa3.68□□□□□ -1.82
CDK5RAP2-217ENST00000484546 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
CDK5RAP2-217ENST00000484546 SPRR5A0A1B0GTR4 108 aa3.63□□□□□ -1.83
CDK5RAP2-217ENST00000484546 SYNE1Q8NF91 8797 aaKnown RBP3.62□□□□□ -1.83
CDK5RAP2-217ENST00000484546 KRTAP5-7Q6L8G8 165 aa3.59□□□□□ -1.83
CDK5RAP2-217ENST00000484546 MT1AP04731 61 aa3.57□□□□□ -1.84
CDK5RAP2-217ENST00000484546 KRTAP9-6A8MVA2 160 aa3.56□□□□□ -1.84
CDK5RAP2-217ENST00000484546 KRTAP6-1Q3LI64 71 aa3.52□□□□□ -1.85
CDK5RAP2-217ENST00000484546 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
CDK5RAP2-217ENST00000484546 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
CDK5RAP2-217ENST00000484546 KRTAP6-2Q3LI66 62 aa3.34□□□□□ -1.87
CDK5RAP2-217ENST00000484546 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
CDK5RAP2-217ENST00000484546 MT3P25713 68 aa3.28□□□□□ -1.88
CDK5RAP2-217ENST00000484546 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
CDK5RAP2-217ENST00000484546 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
CDK5RAP2-217ENST00000484546 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
CDK5RAP2-217ENST00000484546 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
CDK5RAP2-217ENST00000484546 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
CDK5RAP2-217ENST00000484546 AHNAKQ09666 5890 aaKnown RBP3.16□□□□□ -1.9
CDK5RAP2-217ENST00000484546 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
CDK5RAP2-217ENST00000484546 MUC5BQ9HC84 5762 aaPredicted RBP3.13□□□□□ -1.91
CDK5RAP2-217ENST00000484546 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
CDK5RAP2-217ENST00000484546 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
CDK5RAP2-217ENST00000484546 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
CDK5RAP2-217ENST00000484546 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
CDK5RAP2-217ENST00000484546 INE1O15225 51 aa2.74□□□□□ -1.97
CDK5RAP2-217ENST00000484546 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
CDK5RAP2-217ENST00000484546 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
CDK5RAP2-217ENST00000484546 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
CDK5RAP2-217ENST00000484546 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
CDK5RAP2-217ENST00000484546 PRM1P04553 51 aa2.15□□□□□ -2.07
CDK5RAP2-217ENST00000484546 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
CDK5RAP2-217ENST00000484546 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
CDK5RAP2-217ENST00000484546 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 108.1 ms