RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 WFDC13Q8IUB5 93 aa3.2□□□□□ -1.9
CBX3-206ENST00000481057 IGKV3OR2-268A0A0C4DH90 116 aa3.19□□□□□ -1.9
CBX3-206ENST00000481057 GVQW2A0A096LPI5 108 aaPredicted RBP3.18□□□□□ -1.9
CBX3-206ENST00000481057 IGLV7-43P04211 117 aa3.18□□□□□ -1.9
CBX3-206ENST00000481057 SPINT4Q6UDR6 99 aa3.18□□□□□ -1.9
CBX3-206ENST00000481057 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
CBX3-206ENST00000481057 KRTAP13-2Q52LG2 175 aa3.16□□□□□ -1.9
CBX3-206ENST00000481057 LINC00472Q9H8W2 130 aa3.16□□□□□ -1.9
CBX3-206ENST00000481057 C6orf48Q9UBA6 75 aa3.15□□□□□ -1.91
CBX3-206ENST00000481057 A0A096LNI7 61 aa3.14□□□□□ -1.91
CBX3-206ENST00000481057 SPRR2DP22532 72 aa3.14□□□□□ -1.91
CBX3-206ENST00000481057 PCOTHQ58A44 107 aa3.14□□□□□ -1.91
CBX3-206ENST00000481057 HMCN1Q96RW7 5635 aa3.14□□□□□ -1.91
CBX3-206ENST00000481057 LINC00304Q8N9R0 145 aa3.11□□□□□ -1.91
CBX3-206ENST00000481057 MMP24-AS1A0A0U1RRL7 71 aa3.08□□□□□ -1.92
CBX3-206ENST00000481057 SPRR2FQ96RM1 72 aa3.08□□□□□ -1.92
CBX3-206ENST00000481057 Q6ZRX8 168 aa3.07□□□□□ -1.92
CBX3-206ENST00000481057 DEFB105AQ8NG35 78 aa3.07□□□□□ -1.92
CBX3-206ENST00000481057 SSBP3-AS1Q7Z2R9 100 aa3.06□□□□□ -1.92
CBX3-206ENST00000481057 Q96NJ1 140 aa3.06□□□□□ -1.92
CBX3-206ENST00000481057 A0A1W2PNN7 141 aa3.05□□□□□ -1.92
CBX3-206ENST00000481057 A0A1B0GU33 70 aa3.03□□□□□ -1.92
CBX3-206ENST00000481057 CLPSL2Q6UWE3 100 aa3.03□□□□□ -1.92
CBX3-206ENST00000481057 UNQ6190/PRO20217Q6UXQ8 127 aa3.03□□□□□ -1.92
CBX3-206ENST00000481057 SPRR1AP35321 89 aa3.02□□□□□ -1.93
CBX3-206ENST00000481057 A0A0G2JQZ4 141 aa3.01□□□□□ -1.93
CBX3-206ENST00000481057 MRPL34Q9BQ48 92 aaKnown RBP3.01□□□□□ -1.93
CBX3-206ENST00000481057 AHNAKQ09666 5890 aaKnown RBP3□□□□□ -1.93
CBX3-206ENST00000481057 H0YAA0 97 aa2.95□□□□□ -1.94
CBX3-206ENST00000481057 SPRR1BP22528 89 aa2.95□□□□□ -1.94
CBX3-206ENST00000481057 CRIPTQ9P021 101 aa2.95□□□□□ -1.94
CBX3-206ENST00000481057 PRO2289Q9P1D8 64 aa2.92□□□□□ -1.94
CBX3-206ENST00000481057 H1FX-AS1Q4G0G2 97 aa2.91□□□□□ -1.94
CBX3-206ENST00000481057 RPL37P61927 97 aaKnown RBP2.86□□□□□ -1.95
CBX3-206ENST00000481057 PLAC4Q8WY50 150 aa2.86□□□□□ -1.95
CBX3-206ENST00000481057 MT4P47944 62 aa2.85□□□□□ -1.95
CBX3-206ENST00000481057 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.95
CBX3-206ENST00000481057 C9orf92A6NGG3 77 aa2.83□□□□□ -1.96
CBX3-206ENST00000481057 MUC5ACP98088 5654 aa2.82□□□□□ -1.96
CBX3-206ENST00000481057 INE1O15225 51 aa2.8□□□□□ -1.96
CBX3-206ENST00000481057 SPINK1P00995 79 aa2.8□□□□□ -1.96
CBX3-206ENST00000481057 PRLHP81277 87 aa2.79□□□□□ -1.96
CBX3-206ENST00000481057 R4GN34 69 aa2.78□□□□□ -1.96
CBX3-206ENST00000481057 KRTAP13-1Q8IUC0 172 aa2.77□□□□□ -1.97
CBX3-206ENST00000481057 KRTAP8-1Q8IUC2 63 aa2.76□□□□□ -1.97
CBX3-206ENST00000481057 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
CBX3-206ENST00000481057 C10orf95Q9H7T3 257 aa2.73□□□□□ -1.97
CBX3-206ENST00000481057 RPS29P62273 56 aaKnown RBP2.71□□□□□ -1.98
CBX3-206ENST00000481057 MT1BP07438 61 aa2.68□□□□□ -1.98
CBX3-206ENST00000481057 S4R3F8 94 aa2.67□□□□□ -1.98
CBX3-206ENST00000481057 KRTAP12-3P60328 96 aa2.64□□□□□ -1.99
CBX3-206ENST00000481057 A0A0D9SG42 100 aa2.58□□□□□ -2
CBX3-206ENST00000481057 KRTAP12-4P60329 112 aa2.57□□□□□ -2
CBX3-206ENST00000481057 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
CBX3-206ENST00000481057 M0QZ58 72 aa2.53□□□□□ -2
CBX3-206ENST00000481057 KRTAP12-1P59990 96 aa2.52□□□□□ -2.01
CBX3-206ENST00000481057 KRTAP19-8Q3LI54 63 aa2.52□□□□□ -2.01
CBX3-206ENST00000481057 KRTAP13-4Q3LI77 160 aa2.52□□□□□ -2.01
CBX3-206ENST00000481057 KRTAP20-2Q3LI61 65 aa2.42□□□□□ -2.02
CBX3-206ENST00000481057 SPRR2GQ9BYE4 73 aa2.39□□□□□ -2.03
CBX3-206ENST00000481057 SYNE1Q8NF91 8797 aaKnown RBP2.31□□□□□ -2.04
CBX3-206ENST00000481057 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
CBX3-206ENST00000481057 MT1XP80297 61 aa2.29□□□□□ -2.04
CBX3-206ENST00000481057 TNP1P09430 55 aa2.27□□□□□ -2.05
CBX3-206ENST00000481057 KRTAP19-3Q7Z4W3 81 aa2.26□□□□□ -2.05
CBX3-206ENST00000481057 MT1GP13640 62 aa2.1□□□□□ -2.07
CBX3-206ENST00000481057 MT1EP04732 61 aa2.09□□□□□ -2.07
CBX3-206ENST00000481057 KRTAP19-7Q3SYF9 63 aa2.07□□□□□ -2.08
CBX3-206ENST00000481057 MT1MQ8N339 61 aa2.06□□□□□ -2.08
CBX3-206ENST00000481057 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
CBX3-206ENST00000481057 MT1LQ93083 61 aa1.84□□□□□ -2.11
CBX3-206ENST00000481057 KRTAP19-5Q3LI72 72 aa1.78□□□□□ -2.12
CBX3-206ENST00000481057 KRTAP6-2Q3LI66 62 aa1.72□□□□□ -2.13
CBX3-206ENST00000481057 KRTAP6-1Q3LI64 71 aa1.62□□□□□ -2.15
CBX3-206ENST00000481057 PRM1P04553 51 aa1.59□□□□□ -2.15
CBX3-206ENST00000481057 MT1AP04731 61 aa1.54□□□□□ -2.16
CBX3-206ENST00000481057 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
CBX3-206ENST00000481057 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 7 ms