RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 LINC00575Q6W349 94 aa2□□□□□ -2.09
RFC4-212ENST00000479307 COX6B2Q6YFQ2 88 aa1.98□□□□□ -2.09
RFC4-212ENST00000479307 Q8IZM0 81 aa1.98□□□□□ -2.09
RFC4-212ENST00000479307 MT2AP02795 61 aa1.96□□□□□ -2.1
RFC4-212ENST00000479307 Q96NJ1 140 aa1.96□□□□□ -2.1
RFC4-212ENST00000479307 KRTAP2-1Q9BYU5 128 aa1.96□□□□□ -2.1
RFC4-212ENST00000479307 CDKN2A-AS1Q9UH64 79 aa1.96□□□□□ -2.1
RFC4-212ENST00000479307 A0A0G2JQZ4 141 aa1.95□□□□□ -2.1
RFC4-212ENST00000479307 M0QY20 66 aa1.95□□□□□ -2.1
RFC4-212ENST00000479307 MT1FP04733 61 aa1.95□□□□□ -2.1
RFC4-212ENST00000479307 PCOTHQ58A44 107 aa1.95□□□□□ -2.1
RFC4-212ENST00000479307 PRO2289Q9P1D8 64 aa1.95□□□□□ -2.1
RFC4-212ENST00000479307 TP53AIP1Q9HCN2 124 aa1.94□□□□□ -2.1
RFC4-212ENST00000479307 IGLV5-48A0A075B6I7 105 aa1.93□□□□□ -2.1
RFC4-212ENST00000479307 ACYP2P14621 99 aa1.93□□□□□ -2.1
RFC4-212ENST00000479307 K7EQZ3 153 aa1.92□□□□□ -2.1
RFC4-212ENST00000479307 KRTAP12-1P59990 96 aa1.92□□□□□ -2.1
RFC4-212ENST00000479307 DSTQ03001 7570 aaKnown RBP1.91□□□□□ -2.1
RFC4-212ENST00000479307 SSBP3-AS1Q7Z2R9 100 aa1.88□□□□□ -2.11
RFC4-212ENST00000479307 AHNAK2Q8IVF2 5795 aa1.87□□□□□ -2.11
RFC4-212ENST00000479307 RPS29P62273 56 aaKnown RBP1.87□□□□□ -2.11
RFC4-212ENST00000479307 KRTAP13-4Q3LI77 160 aa1.87□□□□□ -2.11
RFC4-212ENST00000479307 SPINK1P00995 79 aa1.86□□□□□ -2.11
RFC4-212ENST00000479307 WFDC13Q8IUB5 93 aa1.86□□□□□ -2.11
RFC4-212ENST00000479307 C6orf48Q9UBA6 75 aa1.86□□□□□ -2.11
RFC4-212ENST00000479307 INE1O15225 51 aa1.84□□□□□ -2.11
RFC4-212ENST00000479307 SPRR2EP22531 72 aa1.84□□□□□ -2.11
RFC4-212ENST00000479307 SPRR2BP35325 72 aa1.84□□□□□ -2.11
RFC4-212ENST00000479307 SPRR2AP35326 72 aa1.84□□□□□ -2.11
RFC4-212ENST00000479307 Q6ZRX8 168 aa1.84□□□□□ -2.11
RFC4-212ENST00000479307 TOMM7Q9P0U1 55 aa1.84□□□□□ -2.11
RFC4-212ENST00000479307 RPL37P61927 97 aaKnown RBP1.83□□□□□ -2.12
RFC4-212ENST00000479307 PLAC4Q8WY50 150 aa1.82□□□□□ -2.12
RFC4-212ENST00000479307 MMP24-AS1A0A0U1RRL7 71 aa1.81□□□□□ -2.12
RFC4-212ENST00000479307 C9orf92A6NGG3 77 aa1.81□□□□□ -2.12
RFC4-212ENST00000479307 CRIPTQ9P021 101 aa1.81□□□□□ -2.12
RFC4-212ENST00000479307 H0YAA0 97 aa1.8□□□□□ -2.12
RFC4-212ENST00000479307 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
RFC4-212ENST00000479307 MRPL34Q9BQ48 92 aaKnown RBP1.8□□□□□ -2.12
RFC4-212ENST00000479307 SPRR2DP22532 72 aa1.79□□□□□ -2.12
RFC4-212ENST00000479307 PRLHP81277 87 aa1.79□□□□□ -2.12
RFC4-212ENST00000479307 UNQ6190/PRO20217Q6UXQ8 127 aa1.79□□□□□ -2.12
RFC4-212ENST00000479307 SPRR2FQ96RM1 72 aa1.79□□□□□ -2.12
RFC4-212ENST00000479307 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.12
RFC4-212ENST00000479307 H1FX-AS1Q4G0G2 97 aa1.74□□□□□ -2.13
RFC4-212ENST00000479307 SPRR1AP35321 89 aa1.72□□□□□ -2.13
RFC4-212ENST00000479307 DEFB105AQ8NG35 78 aa1.71□□□□□ -2.14
RFC4-212ENST00000479307 MT1BP07438 61 aa1.69□□□□□ -2.14
RFC4-212ENST00000479307 SPRR1BP22528 89 aa1.68□□□□□ -2.14
RFC4-212ENST00000479307 C10orf95Q9H7T3 257 aa1.68□□□□□ -2.14
RFC4-212ENST00000479307 AHNAKQ09666 5890 aaKnown RBP1.67□□□□□ -2.14
RFC4-212ENST00000479307 KRTAP8-1Q8IUC2 63 aa1.65□□□□□ -2.15
RFC4-212ENST00000479307 KRTAP19-8Q3LI54 63 aa1.62□□□□□ -2.15
RFC4-212ENST00000479307 MT4P47944 62 aa1.59□□□□□ -2.15
RFC4-212ENST00000479307 S4R3F8 94 aa1.59□□□□□ -2.15
RFC4-212ENST00000479307 MUC5ACP98088 5654 aa1.59□□□□□ -2.16
RFC4-212ENST00000479307 MUC5BQ9HC84 5762 aaPredicted RBP1.59□□□□□ -2.16
RFC4-212ENST00000479307 SPRR2GQ9BYE4 73 aa1.58□□□□□ -2.16
RFC4-212ENST00000479307 MT1XP80297 61 aa1.49□□□□□ -2.17
RFC4-212ENST00000479307 A0A0D9SG42 100 aa1.48□□□□□ -2.17
RFC4-212ENST00000479307 M0QZ58 72 aa1.46□□□□□ -2.18
RFC4-212ENST00000479307 KRTAP20-2Q3LI61 65 aa1.42□□□□□ -2.18
RFC4-212ENST00000479307 KRTAP19-3Q7Z4W3 81 aa1.41□□□□□ -2.18
RFC4-212ENST00000479307 SYNE1Q8NF91 8797 aaKnown RBP1.4□□□□□ -2.19
RFC4-212ENST00000479307 MT1EP04732 61 aa1.35□□□□□ -2.19
RFC4-212ENST00000479307 KRTAP19-7Q3SYF9 63 aa1.35□□□□□ -2.19
RFC4-212ENST00000479307 MT1GP13640 62 aa1.32□□□□□ -2.2
RFC4-212ENST00000479307 MT1MQ8N339 61 aa1.31□□□□□ -2.2
RFC4-212ENST00000479307 TNP1P09430 55 aa1.3□□□□□ -2.2
RFC4-212ENST00000479307 MT1LQ93083 61 aa1.22□□□□□ -2.21
RFC4-212ENST00000479307 KRTAP19-5Q3LI72 72 aa1.18□□□□□ -2.22
RFC4-212ENST00000479307 KRTAP6-2Q3LI66 62 aa1.07□□□□□ -2.24
RFC4-212ENST00000479307 KRTAP6-1Q3LI64 71 aa1.04□□□□□ -2.24
RFC4-212ENST00000479307 PHGR1C9JFL3 82 aa1.03□□□□□ -2.24
RFC4-212ENST00000479307 MT1AP04731 61 aa1.03□□□□□ -2.24
RFC4-212ENST00000479307 PRM1P04553 51 aa0.98□□□□□ -2.25
RFC4-212ENST00000479307 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
RFC4-212ENST00000479307 KRTAP21-1Q3LI58 79 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms