RNA–Protein interactions for RNA: ENST00000479239.1

LRRC47-203, Transcript of leucine rich repeat containing 47, humanhuman

TSL 3

Gene LRRC47, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-203ENST00000479239 KRTAP19-6Q3LI70 58 aa2.67□□□□□ -1.98
LRRC47-203ENST00000479239 CAMK2N1Q7Z7J9 78 aa2.67□□□□□ -1.98
LRRC47-203ENST00000479239 PLAC4Q8WY50 150 aa2.67□□□□□ -1.98
LRRC47-203ENST00000479239 MUC12Q9UKN1 5478 aa2.66□□□□□ -1.98
LRRC47-203ENST00000479239 ROMO1P60602 79 aa2.65□□□□□ -1.99
LRRC47-203ENST00000479239 KRTAP19-8Q3LI54 63 aa2.65□□□□□ -1.99
LRRC47-203ENST00000479239 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
LRRC47-203ENST00000479239 KRTAP5-4Q6L8H1 288 aa2.65□□□□□ -1.99
LRRC47-203ENST00000479239 KTN1-AS1Q86SY8 53 aa2.62□□□□□ -1.99
LRRC47-203ENST00000479239 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
LRRC47-203ENST00000479239 GPR98Q8WXG9 6306 aa2.6□□□□□ -1.99
LRRC47-203ENST00000479239 MT1BP07438 61 aa2.6□□□□□ -1.99
LRRC47-203ENST00000479239 C10orf95Q9H7T3 257 aa2.59□□□□□ -1.99
LRRC47-203ENST00000479239 KMT2DO14686 5537 aa2.58□□□□□ -2
LRRC47-203ENST00000479239 KRTAP2-3P0C7H8 128 aa2.58□□□□□ -2
LRRC47-203ENST00000479239 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
LRRC47-203ENST00000479239 KRTAP2-4Q9BYR9 128 aa2.58□□□□□ -2
LRRC47-203ENST00000479239 KRTAP10-12P60413 245 aa2.56□□□□□ -2
LRRC47-203ENST00000479239 KRTAP10-7P60409 375 aaPredicted RBP2.55□□□□□ -2
LRRC47-203ENST00000479239 KRTAP25-1Q3LHN0 102 aa2.53□□□□□ -2
LRRC47-203ENST00000479239 TNP1P09430 55 aa2.52□□□□□ -2.01
LRRC47-203ENST00000479239 KRTAP10-5P60370 271 aa2.52□□□□□ -2.01
LRRC47-203ENST00000479239 MT1XP80297 61 aa2.52□□□□□ -2.01
LRRC47-203ENST00000479239 PRO2289Q9P1D8 64 aa2.52□□□□□ -2.01
LRRC47-203ENST00000479239 LCE3CQ5T5A8 94 aa2.51□□□□□ -2.01
LRRC47-203ENST00000479239 MDN1Q9NU22 5596 aa2.5□□□□□ -2.01
LRRC47-203ENST00000479239 KRTAP2-1Q9BYU5 128 aa2.48□□□□□ -2.01
LRRC47-203ENST00000479239 PP632Q6XCG6 107 aa2.44□□□□□ -2.02
LRRC47-203ENST00000479239 LCE3AQ5TA76 89 aa2.39□□□□□ -2.03
LRRC47-203ENST00000479239 SPRR2EP22531 72 aa2.38□□□□□ -2.03
LRRC47-203ENST00000479239 SPRR2BP35325 72 aa2.38□□□□□ -2.03
LRRC47-203ENST00000479239 SPRR2AP35326 72 aa2.38□□□□□ -2.03
LRRC47-203ENST00000479239 LUZP6Q538Z0 58 aa2.37□□□□□ -2.03
LRRC47-203ENST00000479239 KRTAP8-1Q8IUC2 63 aa2.35□□□□□ -2.03
LRRC47-203ENST00000479239 KRTAP5-2Q701N4 177 aa2.33□□□□□ -2.04
LRRC47-203ENST00000479239 SPRR2FQ96RM1 72 aa2.32□□□□□ -2.04
LRRC47-203ENST00000479239 KRTAP12-3P60328 96 aa2.31□□□□□ -2.04
LRRC47-203ENST00000479239 OBSCNQ5VST9 7968 aa2.31□□□□□ -2.04
LRRC47-203ENST00000479239 SPRR2DP22532 72 aa2.3□□□□□ -2.04
LRRC47-203ENST00000479239 KRTAP19-5Q3LI72 72 aa2.3□□□□□ -2.04
LRRC47-203ENST00000479239 LCE3EQ5T5B0 92 aa2.29□□□□□ -2.04
LRRC47-203ENST00000479239 LCE1EQ5T753 118 aa2.29□□□□□ -2.04
LRRC47-203ENST00000479239 DSTQ03001 7570 aaKnown RBP2.29□□□□□ -2.04
LRRC47-203ENST00000479239 KRTAP19-7Q3SYF9 63 aa2.25□□□□□ -2.05
LRRC47-203ENST00000479239 MT1EP04732 61 aa2.22□□□□□ -2.05
LRRC47-203ENST00000479239 KRTAP5-10Q6L8G5 202 aa2.22□□□□□ -2.05
LRRC47-203ENST00000479239 AHNAK2Q8IVF2 5795 aa2.18□□□□□ -2.06
LRRC47-203ENST00000479239 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
LRRC47-203ENST00000479239 KRTAP4-3Q9BYR4 195 aa2.18□□□□□ -2.06
LRRC47-203ENST00000479239 MT1LQ93083 61 aa2.17□□□□□ -2.06
LRRC47-203ENST00000479239 SPRR5A0A1B0GTR4 108 aa2.14□□□□□ -2.07
LRRC47-203ENST00000479239 KRTAP9-6A8MVA2 160 aa2.14□□□□□ -2.07
LRRC47-203ENST00000479239 HMCN1Q96RW7 5635 aa2.14□□□□□ -2.07
LRRC47-203ENST00000479239 KRTAP19-3Q7Z4W3 81 aa2.13□□□□□ -2.07
LRRC47-203ENST00000479239 MT1GP13640 62 aa2.12□□□□□ -2.07
LRRC47-203ENST00000479239 KRTAP5-8O75690 187 aa2.11□□□□□ -2.07
LRRC47-203ENST00000479239 MT1MQ8N339 61 aa2.09□□□□□ -2.07
LRRC47-203ENST00000479239 MT4P47944 62 aa2.05□□□□□ -2.08
LRRC47-203ENST00000479239 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
LRRC47-203ENST00000479239 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
LRRC47-203ENST00000479239 SYNE1Q8NF91 8797 aaKnown RBP1.89□□□□□ -2.11
LRRC47-203ENST00000479239 MUC5ACP98088 5654 aa1.88□□□□□ -2.11
LRRC47-203ENST00000479239 KRTAP5-5Q701N2 237 aaPredicted RBP1.86□□□□□ -2.11
LRRC47-203ENST00000479239 MT1AP04731 61 aa1.85□□□□□ -2.11
LRRC47-203ENST00000479239 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
LRRC47-203ENST00000479239 KRTAP20-2Q3LI61 65 aa1.84□□□□□ -2.11
LRRC47-203ENST00000479239 KRTAP6-1Q3LI64 71 aa1.83□□□□□ -2.12
LRRC47-203ENST00000479239 KRTAP12-4P60329 112 aa1.76□□□□□ -2.13
LRRC47-203ENST00000479239 KRTAP6-2Q3LI66 62 aa1.7□□□□□ -2.14
LRRC47-203ENST00000479239 INE1O15225 51 aa1.69□□□□□ -2.14
LRRC47-203ENST00000479239 LCE1CQ5T751 118 aa1.55□□□□□ -2.16
LRRC47-203ENST00000479239 LCE1BQ5T7P3 118 aa1.55□□□□□ -2.16
LRRC47-203ENST00000479239 PRM1P04553 51 aa1.38□□□□□ -2.19
LRRC47-203ENST00000479239 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
LRRC47-203ENST00000479239 MUC19Q7Z5P9 8384 aa1.28□□□□□ -2.2
LRRC47-203ENST00000479239 KRTAP21-2Q3LI59 83 aa1.19□□□□□ -2.22
LRRC47-203ENST00000479239 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
LRRC47-203ENST00000479239 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 8.2 ms