RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 RPS27P42677 84 aaKnown RBP1□□□□□ -2.25
HMGN4-202ENST00000477243 SYNE1Q8NF91 8797 aaKnown RBP0.99□□□□□ -2.25
HMGN4-202ENST00000477243 H1FX-AS1Q4G0G2 97 aa0.99□□□□□ -2.25
HMGN4-202ENST00000477243 WFDC10BQ8IUB3 73 aa0.99□□□□□ -2.25
HMGN4-202ENST00000477243 LINC00308Q8TCZ7 52 aa0.99□□□□□ -2.25
HMGN4-202ENST00000477243 RHPN1-AS1Q9BWJ2 59 aa0.99□□□□□ -2.25
HMGN4-202ENST00000477243 C6orf48Q9UBA6 75 aa0.99□□□□□ -2.25
HMGN4-202ENST00000477243 SPINK4O60575 86 aa0.98□□□□□ -2.25
HMGN4-202ENST00000477243 SPRR1BP22528 89 aa0.98□□□□□ -2.25
HMGN4-202ENST00000477243 WFDC13Q8IUB5 93 aa0.98□□□□□ -2.25
HMGN4-202ENST00000477243 FLGP20930 4061 aaPredicted RBP0.98□□□□□ -2.25
HMGN4-202ENST00000477243 H3BNG1 76 aa0.97□□□□□ -2.25
HMGN4-202ENST00000477243 IAPPP10997 89 aa0.97□□□□□ -2.25
HMGN4-202ENST00000477243 HTN1P15515 57 aa0.96□□□□□ -2.26
HMGN4-202ENST00000477243 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
HMGN4-202ENST00000477243 NOP10Q9NPE3 64 aaKnown RBP0.96□□□□□ -2.26
HMGN4-202ENST00000477243 MT2AP02795 61 aa0.95□□□□□ -2.26
HMGN4-202ENST00000477243 MT1FP04733 61 aa0.95□□□□□ -2.26
HMGN4-202ENST00000477243 DEFB1P60022 68 aa0.95□□□□□ -2.26
HMGN4-202ENST00000477243 RPL39P5Q59GN2 51 aa0.95□□□□□ -2.26
HMGN4-202ENST00000477243 LINC01556Q5JQF7 62 aa0.94□□□□□ -2.26
HMGN4-202ENST00000477243 SMIM2Q9BVW6 85 aa0.94□□□□□ -2.26
HMGN4-202ENST00000477243 SNRPGP62308 76 aaKnown RBP0.93□□□□□ -2.26
HMGN4-202ENST00000477243 KLK9Q2XQG4 91 aa0.92□□□□□ -2.26
HMGN4-202ENST00000477243 TMEM167AQ8TBQ9 72 aa0.92□□□□□ -2.26
HMGN4-202ENST00000477243 NDUFA1O15239 70 aa0.91□□□□□ -2.26
HMGN4-202ENST00000477243 WT1-ASQ06250 92 aa0.89□□□□□ -2.27
HMGN4-202ENST00000477243 KRTAP4-3Q9BYR4 195 aa0.89□□□□□ -2.27
HMGN4-202ENST00000477243 K7EIM0 57 aa0.88□□□□□ -2.27
HMGN4-202ENST00000477243 LCE3AQ5TA76 89 aa0.88□□□□□ -2.27
HMGN4-202ENST00000477243 LINC01590Q5TEZ4 76 aa0.88□□□□□ -2.27
HMGN4-202ENST00000477243 A8MTW9 85 aa0.87□□□□□ -2.27
HMGN4-202ENST00000477243 PRCDQ00LT1 54 aa0.87□□□□□ -2.27
HMGN4-202ENST00000477243 TTTY10Q9BZA0 68 aa0.87□□□□□ -2.27
HMGN4-202ENST00000477243 A0A096LNI7 61 aa0.86□□□□□ -2.27
HMGN4-202ENST00000477243 KRTAP5-5Q701N2 237 aaPredicted RBP0.86□□□□□ -2.27
HMGN4-202ENST00000477243 IGLV5-48A0A075B6I7 105 aa0.83□□□□□ -2.28
HMGN4-202ENST00000477243 S4R3F8 94 aa0.83□□□□□ -2.28
HMGN4-202ENST00000477243 KRTAP20-2Q3LI61 65 aa0.82□□□□□ -2.28
HMGN4-202ENST00000477243 KRTAP8-1Q8IUC2 63 aa0.82□□□□□ -2.28
HMGN4-202ENST00000477243 PRLHP81277 87 aa0.81□□□□□ -2.28
HMGN4-202ENST00000477243 OBSCNQ5VST9 7968 aa0.81□□□□□ -2.28
HMGN4-202ENST00000477243 C9orf92A6NGG3 77 aa0.8□□□□□ -2.28
HMGN4-202ENST00000477243 KRTAP5-11Q6L8G4 156 aa0.8□□□□□ -2.28
HMGN4-202ENST00000477243 KRTAP5-1Q6L8H4 278 aa0.8□□□□□ -2.28
HMGN4-202ENST00000477243 CLPSL2Q6UWE3 100 aa0.8□□□□□ -2.28
HMGN4-202ENST00000477243 SPINK1P00995 79 aa0.78□□□□□ -2.28
HMGN4-202ENST00000477243 MT1BP07438 61 aa0.78□□□□□ -2.28
HMGN4-202ENST00000477243 ARHGAP5-AS1Q96IT6 56 aa0.78□□□□□ -2.28
HMGN4-202ENST00000477243 MMP24-AS1A0A0U1RRL7 71 aa0.77□□□□□ -2.29
HMGN4-202ENST00000477243 LCE1CQ5T751 118 aa0.75□□□□□ -2.29
HMGN4-202ENST00000477243 LCE1BQ5T7P3 118 aa0.75□□□□□ -2.29
HMGN4-202ENST00000477243 M0QY20 66 aa0.74□□□□□ -2.29
HMGN4-202ENST00000477243 POLR2KP53803 58 aaKnown RBP0.73□□□□□ -2.29
HMGN4-202ENST00000477243 RPS29P62273 56 aaKnown RBP0.71□□□□□ -2.3
HMGN4-202ENST00000477243 KRTAP19-8Q3LI54 63 aa0.71□□□□□ -2.3
HMGN4-202ENST00000477243 RPL39P62891 51 aaKnown RBP0.7□□□□□ -2.3
HMGN4-202ENST00000477243 KRTAP19-3Q7Z4W3 81 aa0.7□□□□□ -2.3
HMGN4-202ENST00000477243 MUC19Q7Z5P9 8384 aa0.68□□□□□ -2.3
HMGN4-202ENST00000477243 M0QZ58 72 aa0.68□□□□□ -2.3
HMGN4-202ENST00000477243 SPRR2GQ9BYE4 73 aa0.67□□□□□ -2.3
HMGN4-202ENST00000477243 RPL39LQ96EH5 51 aaKnown RBP0.66□□□□□ -2.3
HMGN4-202ENST00000477243 MT1XP80297 61 aa0.65□□□□□ -2.31
HMGN4-202ENST00000477243 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.64□□□□□ -2.31
HMGN4-202ENST00000477243 TNP1P09430 55 aa0.62□□□□□ -2.31
HMGN4-202ENST00000477243 PRM1P04553 51 aa0.61□□□□□ -2.31
HMGN4-202ENST00000477243 MT1GP13640 62 aa0.61□□□□□ -2.31
HMGN4-202ENST00000477243 TOMM7Q9P0U1 55 aa0.61□□□□□ -2.31
HMGN4-202ENST00000477243 KRTAP21-2Q3LI59 83 aa0.6□□□□□ -2.31
HMGN4-202ENST00000477243 MT1EP04732 61 aa0.59□□□□□ -2.31
HMGN4-202ENST00000477243 KRTAP19-7Q3SYF9 63 aa0.58□□□□□ -2.32
HMGN4-202ENST00000477243 MT1MQ8N339 61 aa0.58□□□□□ -2.32
HMGN4-202ENST00000477243 KRTAP6-2Q3LI66 62 aa0.51□□□□□ -2.33
HMGN4-202ENST00000477243 MT1LQ93083 61 aa0.51□□□□□ -2.33
HMGN4-202ENST00000477243 KRTAP19-5Q3LI72 72 aa0.5□□□□□ -2.33
HMGN4-202ENST00000477243 KRTAP6-1Q3LI64 71 aa0.46□□□□□ -2.34
HMGN4-202ENST00000477243 MT1AP04731 61 aa0.44□□□□□ -2.34
HMGN4-202ENST00000477243 MUC16Q8WXI7 14507 aa0.35□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 87.6 ms