RNA–Protein interactions for RNA: ENST00000476531.1

PGK1-203, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 2

Gene PGK1, Length 960 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-203ENST00000476531 SPINT4Q6UDR6 99 aa4.42□□□□□ -1.7
PGK1-203ENST00000476531 LCE1AQ5T7P2 110 aa4.41□□□□□ -1.7
PGK1-203ENST00000476531 CDC42SE1Q9NRR8 79 aa4.41□□□□□ -1.7
PGK1-203ENST00000476531 PLAC4Q8WY50 150 aa4.38□□□□□ -1.71
PGK1-203ENST00000476531 MT1XP80297 61 aa4.37□□□□□ -1.71
PGK1-203ENST00000476531 KRTAP8-1Q8IUC2 63 aa4.37□□□□□ -1.71
PGK1-203ENST00000476531 BRK1Q8WUW1 75 aa4.36□□□□□ -1.71
PGK1-203ENST00000476531 SPRR2DP22532 72 aa4.35□□□□□ -1.71
PGK1-203ENST00000476531 PRO2289Q9P1D8 64 aa4.34□□□□□ -1.71
PGK1-203ENST00000476531 CAMK2N1Q7Z7J9 78 aa4.3□□□□□ -1.72
PGK1-203ENST00000476531 K7ERS5 55 aa4.24□□□□□ -1.73
PGK1-203ENST00000476531 SVIPQ8NHG7 77 aa4.24□□□□□ -1.73
PGK1-203ENST00000476531 C10orf95Q9H7T3 257 aa4.24□□□□□ -1.73
PGK1-203ENST00000476531 DSTQ03001 7570 aaKnown RBP4.2□□□□□ -1.74
PGK1-203ENST00000476531 KRTAP10-7P60409 375 aaPredicted RBP4.16□□□□□ -1.74
PGK1-203ENST00000476531 PRO0628Q9UI54 55 aa4.16□□□□□ -1.74
PGK1-203ENST00000476531 KRTAP15-1Q3LI76 137 aa4.15□□□□□ -1.75
PGK1-203ENST00000476531 KRTAP10-12P60413 245 aa4.14□□□□□ -1.75
PGK1-203ENST00000476531 ROMO1P60602 79 aa4.12□□□□□ -1.75
PGK1-203ENST00000476531 PMAIP1Q13794 54 aa4.09□□□□□ -1.75
PGK1-203ENST00000476531 TNP1P09430 55 aa4.05□□□□□ -1.76
PGK1-203ENST00000476531 KRTAP25-1Q3LHN0 102 aa4.02□□□□□ -1.77
PGK1-203ENST00000476531 LCE3AQ5TA76 89 aa4□□□□□ -1.77
PGK1-203ENST00000476531 HMCN1Q96RW7 5635 aa3.97□□□□□ -1.77
PGK1-203ENST00000476531 PRAC1Q96KF2 57 aa3.96□□□□□ -1.78
PGK1-203ENST00000476531 AHNAK2Q8IVF2 5795 aa3.94□□□□□ -1.78
PGK1-203ENST00000476531 KRTAP19-7Q3SYF9 63 aa3.92□□□□□ -1.78
PGK1-203ENST00000476531 KRTAP19-3Q7Z4W3 81 aa3.9□□□□□ -1.79
PGK1-203ENST00000476531 MT1EP04732 61 aa3.89□□□□□ -1.79
PGK1-203ENST00000476531 KRTAP19-5Q3LI72 72 aa3.89□□□□□ -1.79
PGK1-203ENST00000476531 KRTAP5-10Q6L8G5 202 aa3.89□□□□□ -1.79
PGK1-203ENST00000476531 KTN1-AS1Q86SY8 53 aa3.88□□□□□ -1.79
PGK1-203ENST00000476531 MT4P47944 62 aa3.85□□□□□ -1.79
PGK1-203ENST00000476531 KRTAP12-3P60328 96 aa3.8□□□□□ -1.8
PGK1-203ENST00000476531 KRTAP5-7Q6L8G8 165 aa3.8□□□□□ -1.8
PGK1-203ENST00000476531 PP632Q6XCG6 107 aa3.8□□□□□ -1.8
PGK1-203ENST00000476531 MT1GP13640 62 aa3.77□□□□□ -1.81
PGK1-203ENST00000476531 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
PGK1-203ENST00000476531 KRTAP5-4Q6L8H1 288 aa3.72□□□□□ -1.81
PGK1-203ENST00000476531 MT1MQ8N339 61 aa3.72□□□□□ -1.81
PGK1-203ENST00000476531 MT1LQ93083 61 aa3.7□□□□□ -1.82
PGK1-203ENST00000476531 SPRR5A0A1B0GTR4 108 aa3.68□□□□□ -1.82
PGK1-203ENST00000476531 KRTAP4-3Q9BYR4 195 aa3.66□□□□□ -1.82
PGK1-203ENST00000476531 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
PGK1-203ENST00000476531 LCE3CQ5T5A8 94 aa3.54□□□□□ -1.84
PGK1-203ENST00000476531 KRTAP20-2Q3LI61 65 aa3.52□□□□□ -1.85
PGK1-203ENST00000476531 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
PGK1-203ENST00000476531 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
PGK1-203ENST00000476531 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
PGK1-203ENST00000476531 KRTAP12-4P60329 112 aa3.39□□□□□ -1.87
PGK1-203ENST00000476531 MUC5ACP98088 5654 aa3.36□□□□□ -1.87
PGK1-203ENST00000476531 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
PGK1-203ENST00000476531 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.87
PGK1-203ENST00000476531 MT3P25713 68 aa3.34□□□□□ -1.87
PGK1-203ENST00000476531 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
PGK1-203ENST00000476531 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
PGK1-203ENST00000476531 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
PGK1-203ENST00000476531 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
PGK1-203ENST00000476531 KRTAP6-1Q3LI64 71 aa3.14□□□□□ -1.91
PGK1-203ENST00000476531 MT1AP04731 61 aa3.13□□□□□ -1.91
PGK1-203ENST00000476531 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
PGK1-203ENST00000476531 LUZP6Q538Z0 58 aa3.09□□□□□ -1.91
PGK1-203ENST00000476531 NDUFAF8A1L188 74 aa3.08□□□□□ -1.92
PGK1-203ENST00000476531 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
PGK1-203ENST00000476531 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
PGK1-203ENST00000476531 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
PGK1-203ENST00000476531 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
PGK1-203ENST00000476531 LCE3DQ9BYE3 92 aa2.61□□□□□ -1.99
PGK1-203ENST00000476531 LCE1BQ5T7P3 118 aa2.55□□□□□ -2
PGK1-203ENST00000476531 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
PGK1-203ENST00000476531 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
PGK1-203ENST00000476531 INE1O15225 51 aa2.4□□□□□ -2.03
PGK1-203ENST00000476531 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
PGK1-203ENST00000476531 PRM1P04553 51 aa2.18□□□□□ -2.06
PGK1-203ENST00000476531 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
PGK1-203ENST00000476531 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
PGK1-203ENST00000476531 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
PGK1-203ENST00000476531 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 10.7 ms