RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 MT1HL1P0DM35 61 aa-0.49□□□□□ -2.49
TM9SF3-204ENST00000475401 DEFB136Q30KP8 78 aa-0.49□□□□□ -2.49
TM9SF3-204ENST00000475401 WDFY3Q8IZQ1 3526 aa-0.5□□□□□ -2.49
TM9SF3-204ENST00000475401 PRUNE2Q8WUY3 3088 aa-0.5□□□□□ -2.49
TM9SF3-204ENST00000475401 DEFB4AO15263 64 aa-0.5□□□□□ -2.49
TM9SF3-204ENST00000475401 CSMD2Q7Z408 3487 aa-0.51□□□□□ -2.49
TM9SF3-204ENST00000475401 MT1GP13640 62 aa-0.52□□□□□ -2.49
TM9SF3-204ENST00000475401 KRTAP20-1Q3LI63 56 aa-0.52□□□□□ -2.49
TM9SF3-204ENST00000475401 CFAP54Q96N23 3096 aa-0.52□□□□□ -2.49
TM9SF3-204ENST00000475401 DNAH14Q0VDD8 3507 aa-0.53□□□□□ -2.49
TM9SF3-204ENST00000475401 TOMM7Q9P0U1 55 aa-0.53□□□□□ -2.49
TM9SF3-204ENST00000475401 VPS13CQ709C8 3753 aa-0.53□□□□□ -2.49
TM9SF3-204ENST00000475401 DCHS1Q96JQ0 3298 aa-0.54□□□□□ -2.5
TM9SF3-204ENST00000475401 FREM2Q5SZK8 3169 aa-0.55□□□□□ -2.5
TM9SF3-204ENST00000475401 FRYLO94915 3013 aa-0.55□□□□□ -2.5
TM9SF3-204ENST00000475401 KRTAP19-6Q3LI70 58 aa-0.55□□□□□ -2.5
TM9SF3-204ENST00000475401 MT1MQ8N339 61 aa-0.55□□□□□ -2.5
TM9SF3-204ENST00000475401 SPEGQ15772 3267 aa-0.55□□□□□ -2.5
TM9SF3-204ENST00000475401 SAMD9LQ8IVG5 1584 aa-0.56□□□□□ -2.5
TM9SF3-204ENST00000475401 MT2AP02795 61 aa-0.56□□□□□ -2.5
TM9SF3-204ENST00000475401 EP400Q96L91 3159 aa-0.59□□□□□ -2.5
TM9SF3-204ENST00000475401 MT1BP07438 61 aa-0.59□□□□□ -2.5
TM9SF3-204ENST00000475401 LINC01590Q5TEZ4 76 aa-0.59□□□□□ -2.5
TM9SF3-204ENST00000475401 SZT2Q5T011 3432 aa-0.59□□□□□ -2.5
TM9SF3-204ENST00000475401 MUC3AQ02505 3323 aa-0.6□□□□□ -2.51
TM9SF3-204ENST00000475401 WDFY4Q6ZS81 3184 aa-0.6□□□□□ -2.51
TM9SF3-204ENST00000475401 CEP250Q9BV73 2442 aa-0.6□□□□□ -2.51
TM9SF3-204ENST00000475401 RPL39P62891 51 aaKnown RBP-0.6□□□□□ -2.51
TM9SF3-204ENST00000475401 USP34Q70CQ2 3546 aa-0.6□□□□□ -2.51
TM9SF3-204ENST00000475401 CEP350Q5VT06 3117 aa-0.61□□□□□ -2.51
TM9SF3-204ENST00000475401 PCNTO95613 3336 aa-0.61□□□□□ -2.51
TM9SF3-204ENST00000475401 RPS29P62273 56 aaKnown RBP-0.62□□□□□ -2.51
TM9SF3-204ENST00000475401 RHPN1-AS1Q9BWJ2 59 aa-0.62□□□□□ -2.51
TM9SF3-204ENST00000475401 MKI67P46013 3256 aaKnown RBP-0.62□□□□□ -2.51
TM9SF3-204ENST00000475401 DUOX1Q9NRD9 1551 aa-0.63□□□□□ -2.51
TM9SF3-204ENST00000475401 VCANP13611 3396 aa-0.64□□□□□ -2.51
TM9SF3-204ENST00000475401 CFAP47Q6ZTR5 3102 aa-0.64□□□□□ -2.51
TM9SF3-204ENST00000475401 RPL39LQ96EH5 51 aaKnown RBP-0.65□□□□□ -2.51
TM9SF3-204ENST00000475401 LOC400499M0QZD8 3231 aa-0.65□□□□□ -2.51
TM9SF3-204ENST00000475401 ASPMQ8IZT6 3477 aa-0.66□□□□□ -2.52
TM9SF3-204ENST00000475401 TOP2AP11388 1531 aaKnown RBP-0.66□□□□□ -2.52
TM9SF3-204ENST00000475401 MROH2BQ7Z745 1585 aa-0.66□□□□□ -2.52
TM9SF3-204ENST00000475401 UNC80Q8N2C7 3258 aa-0.67□□□□□ -2.52
TM9SF3-204ENST00000475401 MT1FP04733 61 aa-0.68□□□□□ -2.52
TM9SF3-204ENST00000475401 A0A096LNI7 61 aa-0.69□□□□□ -2.52
TM9SF3-204ENST00000475401 DEFB133Q30KQ1 61 aa-0.69□□□□□ -2.52
TM9SF3-204ENST00000475401 DNAH12Q6ZR08 3092 aa-0.7□□□□□ -2.52
TM9SF3-204ENST00000475401 CENPFP49454 3210 aa-0.7□□□□□ -2.52
TM9SF3-204ENST00000475401 HTN1P15515 57 aa-0.7□□□□□ -2.52
TM9SF3-204ENST00000475401 BRCA2P51587 3418 aa-0.71□□□□□ -2.52
TM9SF3-204ENST00000475401 CDH23Q9H251 3354 aa-0.75□□□□□ -2.53
TM9SF3-204ENST00000475401 CD52P31358 61 aa-0.75□□□□□ -2.53
TM9SF3-204ENST00000475401 DEFB104AQ8WTQ1 72 aa-0.75□□□□□ -2.53
TM9SF3-204ENST00000475401 TTTY10Q9BZA0 68 aa-0.75□□□□□ -2.53
TM9SF3-204ENST00000475401 DEFB124Q8NES8 71 aa-0.77□□□□□ -2.53
TM9SF3-204ENST00000475401 XIRP2A4UGR9 3374 aa-0.77□□□□□ -2.53
TM9SF3-204ENST00000475401 VPS13AQ96RL7 3174 aa-0.78□□□□□ -2.53
TM9SF3-204ENST00000475401 GCC2Q8IWJ2 1684 aa-0.78□□□□□ -2.53
TM9SF3-204ENST00000475401 SNRPGP62308 76 aaKnown RBP-0.79□□□□□ -2.54
TM9SF3-204ENST00000475401 KRTAP19-2Q3LHN2 52 aa-0.8□□□□□ -2.54
TM9SF3-204ENST00000475401 UTRNP46939 3433 aa-0.8□□□□□ -2.54
TM9SF3-204ENST00000475401 H3BUX3 64 aa-0.82□□□□□ -2.54
TM9SF3-204ENST00000475401 K7EIM0 57 aa-0.85□□□□□ -2.55
TM9SF3-204ENST00000475401 GOLGB1Q14789 3259 aaKnown RBP-0.85□□□□□ -2.55
TM9SF3-204ENST00000475401 ARHGAP5-AS1Q96IT6 56 aa-0.87□□□□□ -2.55
TM9SF3-204ENST00000475401 PRCDQ00LT1 54 aa-0.89□□□□□ -2.55
TM9SF3-204ENST00000475401 LINC01556Q5JQF7 62 aa-0.92□□□□□ -2.56
TM9SF3-204ENST00000475401 TMEM167AQ8TBQ9 72 aa-0.98□□□□□ -2.57
TM9SF3-204ENST00000475401 H3BSH0 61 aa-1.02□□□□□ -2.57
TM9SF3-204ENST00000475401 APELAP0DMC3 54 aa-1.02□□□□□ -2.57
TM9SF3-204ENST00000475401 A0A096LPF7 62 aa-1.03□□□□□ -2.57
TM9SF3-204ENST00000475401 RPL39P5Q59GN2 51 aa-1.05□□□□□ -2.58
TM9SF3-204ENST00000475401 DEFB108AA8MXU0 73 aa-1.08□□□□□ -2.58
TM9SF3-204ENST00000475401 HTN3P15516 51 aa-1.14□□□□□ -2.59
TM9SF3-204ENST00000475401 Q9Y3F1 56 aa-1.14□□□□□ -2.59
TM9SF3-204ENST00000475401 COX14Q96I36 57 aa-1.3□□□□□ -2.62
TM9SF3-204ENST00000475401 DEFB108BQ8NET1 73 aa-1.31□□□□□ -2.62
TM9SF3-204ENST00000475401 STATHP02808 62 aa-1.48□□□□□ -2.65
Retrieved 78 of 20,778 RNA–protein pairs in 95.5 ms