RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 NMES1Q9C002 83 aa-2.33□□□□□ -2.78
ECHDC1-213ENST00000474240 IQGAP3Q86VI3 1631 aa-2.33□□□□□ -2.78
ECHDC1-213ENST00000474240 WFDC10BQ8IUB3 73 aa-2.34□□□□□ -2.78
ECHDC1-213ENST00000474240 UGGT2Q9NYU1 1516 aa-2.34□□□□□ -2.78
ECHDC1-213ENST00000474240 ABCA6Q8N139 1617 aa-2.39□□□□□ -2.79
ECHDC1-213ENST00000474240 S100ZQ8WXG8 99 aa-2.4□□□□□ -2.79
ECHDC1-213ENST00000474240 PDCD5O14737 125 aa-2.42□□□□□ -2.8
ECHDC1-213ENST00000474240 EFCAB6Q5THR3 1501 aa-2.42□□□□□ -2.8
ECHDC1-213ENST00000474240 CD52P31358 61 aa-2.43□□□□□ -2.8
ECHDC1-213ENST00000474240 SMCO4Q9NRQ5 59 aa-2.43□□□□□ -2.8
ECHDC1-213ENST00000474240 DEFB131AP59861 70 aa-2.47□□□□□ -2.8
ECHDC1-213ENST00000474240 DEFB133Q30KQ1 61 aa-2.47□□□□□ -2.8
ECHDC1-213ENST00000474240 UGGT1Q9NYU2 1555 aa-2.49□□□□□ -2.81
ECHDC1-213ENST00000474240 H0YGX0 51 aa-2.49□□□□□ -2.81
ECHDC1-213ENST00000474240 POLR2KP53803 58 aaKnown RBP-2.49□□□□□ -2.81
ECHDC1-213ENST00000474240 IGIPA6NJ69 53 aa-2.52□□□□□ -2.81
ECHDC1-213ENST00000474240 MROH2AA6NES4 1674 aa-2.54□□□□□ -2.82
ECHDC1-213ENST00000474240 HTN1P15515 57 aa-2.55□□□□□ -2.82
ECHDC1-213ENST00000474240 EFCAB5A4FU69 1503 aa-2.57□□□□□ -2.82
ECHDC1-213ENST00000474240 LMO7Q8WWI1 1683 aa-2.59□□□□□ -2.82
ECHDC1-213ENST00000474240 CCDC180Q9P1Z9 1646 aa-2.59□□□□□ -2.82
ECHDC1-213ENST00000474240 SCRIBQ14160 1630 aa-2.62□□□□□ -2.83
ECHDC1-213ENST00000474240 ABCA10Q8WWZ4 1543 aa-2.63□□□□□ -2.83
ECHDC1-213ENST00000474240 SYCP2Q9BX26 1530 aa-2.63□□□□□ -2.83
ECHDC1-213ENST00000474240 A0A096LNI7 61 aa-2.65□□□□□ -2.83
ECHDC1-213ENST00000474240 PLNP26678 52 aa-2.66□□□□□ -2.84
ECHDC1-213ENST00000474240 RHPN1-AS1Q9BWJ2 59 aa-2.66□□□□□ -2.84
ECHDC1-213ENST00000474240 NFAT5O94916 1531 aa-2.67□□□□□ -2.84
ECHDC1-213ENST00000474240 AGLP35573 1532 aa-2.67□□□□□ -2.84
ECHDC1-213ENST00000474240 CPS1P31327 1500 aa-2.68□□□□□ -2.84
ECHDC1-213ENST00000474240 LINC01556Q5JQF7 62 aa-2.68□□□□□ -2.84
ECHDC1-213ENST00000474240 A0A087WWC5 75 aa-2.71□□□□□ -2.84
ECHDC1-213ENST00000474240 ABCA5Q8WWZ7 1642 aa-2.74□□□□□ -2.85
ECHDC1-213ENST00000474240 SMIM5Q71RC9 77 aa-2.76□□□□□ -2.85
ECHDC1-213ENST00000474240 TFF3Q07654 80 aa-2.77□□□□□ -2.85
ECHDC1-213ENST00000474240 SMIM2Q9BVW6 85 aa-2.77□□□□□ -2.85
ECHDC1-213ENST00000474240 TRPM2O94759 1503 aa-2.8□□□□□ -2.86
ECHDC1-213ENST00000474240 DEFB124Q8NES8 71 aa-2.81□□□□□ -2.86
ECHDC1-213ENST00000474240 CLTCL1P53675 1640 aa-2.83□□□□□ -2.86
ECHDC1-213ENST00000474240 LINC01590Q5TEZ4 76 aa-2.84□□□□□ -2.86
ECHDC1-213ENST00000474240 DDX60Q8IY21 1712 aaKnown RBP-2.88□□□□□ -2.87
ECHDC1-213ENST00000474240 PRXQ9BXM0 1461 aa-2.88□□□□□ -2.87
ECHDC1-213ENST00000474240 TOMM7Q9P0U1 55 aa-2.91□□□□□ -2.88
ECHDC1-213ENST00000474240 APELAP0DMC3 54 aa-2.92□□□□□ -2.88
ECHDC1-213ENST00000474240 HTN3P15516 51 aa-2.93□□□□□ -2.88
ECHDC1-213ENST00000474240 ADCY10Q96PN6 1610 aa-2.93□□□□□ -2.88
ECHDC1-213ENST00000474240 IQGAP1P46940 1657 aa-2.95□□□□□ -2.88
ECHDC1-213ENST00000474240 ABCC8Q09428 1581 aa-2.97□□□□□ -2.89
ECHDC1-213ENST00000474240 A0A096LPF7 62 aa-3□□□□□ -2.89
ECHDC1-213ENST00000474240 CMC2Q9NRP2 79 aa-3□□□□□ -2.89
ECHDC1-213ENST00000474240 H3BSH0 61 aa-3.01□□□□□ -2.89
ECHDC1-213ENST00000474240 FANCD2Q9BXW9 1451 aa-3.03□□□□□ -2.89
ECHDC1-213ENST00000474240 NDUFA1O15239 70 aa-3.05□□□□□ -2.9
ECHDC1-213ENST00000474240 DUOX1Q9NRD9 1551 aa-3.12□□□□□ -2.91
ECHDC1-213ENST00000474240 H3BUX3 64 aa-3.13□□□□□ -2.91
ECHDC1-213ENST00000474240 TOP2AP11388 1531 aaKnown RBP-3.15□□□□□ -2.91
ECHDC1-213ENST00000474240 ATP7AQ04656 1500 aa-3.21□□□□□ -2.92
ECHDC1-213ENST00000474240 ERICH3Q5RHP9 1530 aa-3.23□□□□□ -2.93
ECHDC1-213ENST00000474240 SMIM31A0A1B0GVY4 71 aa-3.26□□□□□ -2.93
ECHDC1-213ENST00000474240 RPL39P62891 51 aaKnown RBP-3.28□□□□□ -2.93
ECHDC1-213ENST00000474240 STATHP02808 62 aa-3.29□□□□□ -2.94
ECHDC1-213ENST00000474240 Q9Y3F1 56 aa-3.31□□□□□ -2.94
ECHDC1-213ENST00000474240 SAMD9LQ8IVG5 1584 aa-3.33□□□□□ -2.94
ECHDC1-213ENST00000474240 COX14Q96I36 57 aa-3.34□□□□□ -2.94
ECHDC1-213ENST00000474240 RPL39LQ96EH5 51 aaKnown RBP-3.35□□□□□ -2.95
ECHDC1-213ENST00000474240 PRCDQ00LT1 54 aa-3.36□□□□□ -2.95
ECHDC1-213ENST00000474240 TMEM167AQ8TBQ9 72 aa-3.36□□□□□ -2.95
ECHDC1-213ENST00000474240 MROH2BQ7Z745 1585 aa-3.39□□□□□ -2.95
ECHDC1-213ENST00000474240 DEFB108BQ8NET1 73 aa-3.4□□□□□ -2.95
ECHDC1-213ENST00000474240 K7EIM0 57 aa-3.48□□□□□ -2.97
ECHDC1-213ENST00000474240 DEFB108AA8MXU0 73 aa-3.5□□□□□ -2.97
ECHDC1-213ENST00000474240 SNRPGP15A8MWD9 76 aa-3.54□□□□□ -2.98
ECHDC1-213ENST00000474240 ARHGAP5-AS1Q96IT6 56 aa-3.55□□□□□ -2.98
ECHDC1-213ENST00000474240 IQGAP2Q13576 1575 aa-3.59□□□□□ -2.98
ECHDC1-213ENST00000474240 RPL39P5Q59GN2 51 aa-3.72□□□□□ -3
ECHDC1-213ENST00000474240 SNRPGP62308 76 aaKnown RBP-3.81□□□□□ -3.02
ECHDC1-213ENST00000474240 TOMM5Q8N4H5 51 aa-3.81□□□□□ -3.02
ECHDC1-213ENST00000474240 GCC2Q8IWJ2 1684 aa-3.89□□□□□ -3.03
Retrieved 78 of 20,778 RNA–protein pairs in 46.9 ms