RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 NEBP20929 6669 aa4.53□□□□□ -1.68
SP140-208ENST00000473711 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.53□□□□□ -1.68
SP140-208ENST00000473711 C10orf95Q9H7T3 257 aa4.47□□□□□ -1.69
SP140-208ENST00000473711 MT1XP80297 61 aa4.46□□□□□ -1.7
SP140-208ENST00000473711 KRTAP10-5P60370 271 aa4.45□□□□□ -1.7
SP140-208ENST00000473711 KRTAP6-3Q3LI67 103 aa4.44□□□□□ -1.7
SP140-208ENST00000473711 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
SP140-208ENST00000473711 MT3P25713 68 aa4.43□□□□□ -1.7
SP140-208ENST00000473711 KRTAP20-1Q3LI63 56 aa4.42□□□□□ -1.7
SP140-208ENST00000473711 MUC12Q9UKN1 5478 aa4.42□□□□□ -1.7
SP140-208ENST00000473711 PRO2289Q9P1D8 64 aa4.41□□□□□ -1.7
SP140-208ENST00000473711 KRTAP19-6Q3LI70 58 aa4.39□□□□□ -1.71
SP140-208ENST00000473711 TNP1P09430 55 aa4.33□□□□□ -1.72
SP140-208ENST00000473711 NDUFAF8A1L188 74 aa4.25□□□□□ -1.73
SP140-208ENST00000473711 KRTAP10-12P60413 245 aa4.22□□□□□ -1.73
SP140-208ENST00000473711 KMT2DO14686 5537 aa4.21□□□□□ -1.73
SP140-208ENST00000473711 PP632Q6XCG6 107 aa4.21□□□□□ -1.74
SP140-208ENST00000473711 MDN1Q9NU22 5596 aa4.2□□□□□ -1.74
SP140-208ENST00000473711 GPR98Q8WXG9 6306 aa4.18□□□□□ -1.74
SP140-208ENST00000473711 LCE3AQ5TA76 89 aa4.18□□□□□ -1.74
SP140-208ENST00000473711 KRTAP2-3P0C7H8 128 aa4.11□□□□□ -1.75
SP140-208ENST00000473711 KRTAP2-4Q9BYR9 128 aa4.11□□□□□ -1.75
SP140-208ENST00000473711 KRTAP8-1Q8IUC2 63 aa4.06□□□□□ -1.76
SP140-208ENST00000473711 A0A0A0MQY5 61 aa4.04□□□□□ -1.76
SP140-208ENST00000473711 LUZP6Q538Z0 58 aa4.04□□□□□ -1.76
SP140-208ENST00000473711 KRTAP19-5Q3LI72 72 aa4.03□□□□□ -1.76
SP140-208ENST00000473711 KRTAP12-3P60328 96 aa4□□□□□ -1.77
SP140-208ENST00000473711 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
SP140-208ENST00000473711 KRTAP19-7Q3SYF9 63 aa3.97□□□□□ -1.77
SP140-208ENST00000473711 KRTAP2-1Q9BYU5 128 aa3.94□□□□□ -1.78
SP140-208ENST00000473711 KRTAP5-1Q6L8H4 278 aa3.93□□□□□ -1.78
SP140-208ENST00000473711 MT1EP04732 61 aa3.91□□□□□ -1.78
SP140-208ENST00000473711 LCE1FQ5T754 118 aa3.9□□□□□ -1.79
SP140-208ENST00000473711 SPRR2FQ96RM1 72 aa3.9□□□□□ -1.79
SP140-208ENST00000473711 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
SP140-208ENST00000473711 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
SP140-208ENST00000473711 MT1LQ93083 61 aa3.82□□□□□ -1.8
SP140-208ENST00000473711 SPRR2EP22531 72 aa3.79□□□□□ -1.8
SP140-208ENST00000473711 SPRR2BP35325 72 aa3.79□□□□□ -1.8
SP140-208ENST00000473711 SPRR2AP35326 72 aa3.79□□□□□ -1.8
SP140-208ENST00000473711 KRTAP5-4Q6L8H1 288 aa3.78□□□□□ -1.8
SP140-208ENST00000473711 KRTAP19-3Q7Z4W3 81 aa3.77□□□□□ -1.81
SP140-208ENST00000473711 KRTAP4-4Q9BYR3 166 aa3.76□□□□□ -1.81
SP140-208ENST00000473711 MT1GP13640 62 aa3.73□□□□□ -1.81
SP140-208ENST00000473711 LCE3CQ5T5A8 94 aa3.73□□□□□ -1.81
SP140-208ENST00000473711 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
SP140-208ENST00000473711 MT1MQ8N339 61 aa3.69□□□□□ -1.82
SP140-208ENST00000473711 SPRR2DP22532 72 aa3.67□□□□□ -1.82
SP140-208ENST00000473711 KRTAP4-3Q9BYR4 195 aa3.65□□□□□ -1.83
SP140-208ENST00000473711 AHNAK2Q8IVF2 5795 aa3.65□□□□□ -1.83
SP140-208ENST00000473711 HMCN1Q96RW7 5635 aa3.59□□□□□ -1.84
SP140-208ENST00000473711 INE1O15225 51 aa3.57□□□□□ -1.84
SP140-208ENST00000473711 KRTAP5-10Q6L8G5 202 aa3.54□□□□□ -1.84
SP140-208ENST00000473711 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
SP140-208ENST00000473711 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
SP140-208ENST00000473711 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
SP140-208ENST00000473711 KRTAP5-5Q701N2 237 aaPredicted RBP3.31□□□□□ -1.88
SP140-208ENST00000473711 MT4P47944 62 aa3.28□□□□□ -1.88
SP140-208ENST00000473711 MT1AP04731 61 aa3.25□□□□□ -1.89
SP140-208ENST00000473711 KRTAP6-1Q3LI64 71 aa3.23□□□□□ -1.89
SP140-208ENST00000473711 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
SP140-208ENST00000473711 KRTAP12-4P60329 112 aa3.12□□□□□ -1.91
SP140-208ENST00000473711 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
SP140-208ENST00000473711 SYNE1Q8NF91 8797 aaKnown RBP3.1□□□□□ -1.91
SP140-208ENST00000473711 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
SP140-208ENST00000473711 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.91
SP140-208ENST00000473711 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
SP140-208ENST00000473711 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
SP140-208ENST00000473711 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
SP140-208ENST00000473711 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
SP140-208ENST00000473711 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
SP140-208ENST00000473711 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
SP140-208ENST00000473711 PRM1P04553 51 aa2.48□□□□□ -2.01
SP140-208ENST00000473711 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.03
SP140-208ENST00000473711 KRTAP21-2Q3LI59 83 aa2.11□□□□□ -2.07
SP140-208ENST00000473711 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
SP140-208ENST00000473711 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
SP140-208ENST00000473711 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms