RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 CAMK2N1Q7Z7J9 78 aa3.16□□□□□ -1.9
CKS1B-205ENST00000473344 S4R3F8 94 aa3.15□□□□□ -1.91
CKS1B-205ENST00000473344 KMT2DO14686 5537 aa3.15□□□□□ -1.91
CKS1B-205ENST00000473344 M0QZ58 72 aa3.14□□□□□ -1.91
CKS1B-205ENST00000473344 A0A0D9SG42 100 aa3.11□□□□□ -1.91
CKS1B-205ENST00000473344 MT1BP07438 61 aa3.11□□□□□ -1.91
CKS1B-205ENST00000473344 PLAC4Q8WY50 150 aa3.11□□□□□ -1.91
CKS1B-205ENST00000473344 KRTAP5-9P26371 169 aa3.1□□□□□ -1.91
CKS1B-205ENST00000473344 KRTAP10-5P60370 271 aa3.1□□□□□ -1.91
CKS1B-205ENST00000473344 PP632Q6XCG6 107 aa3.1□□□□□ -1.91
CKS1B-205ENST00000473344 KRTAP19-8Q3LI54 63 aa3.09□□□□□ -1.91
CKS1B-205ENST00000473344 SPRR2GQ9BYE4 73 aa3.09□□□□□ -1.91
CKS1B-205ENST00000473344 C10orf95Q9H7T3 257 aa3.08□□□□□ -1.92
CKS1B-205ENST00000473344 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
CKS1B-205ENST00000473344 KRTAP2-3P0C7H8 128 aa3.06□□□□□ -1.92
CKS1B-205ENST00000473344 KRTAP2-4Q9BYR9 128 aa3.06□□□□□ -1.92
CKS1B-205ENST00000473344 KRTAP12-1P59990 96 aa3.02□□□□□ -1.93
CKS1B-205ENST00000473344 KRTAP13-4Q3LI77 160 aa3.02□□□□□ -1.93
CKS1B-205ENST00000473344 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
CKS1B-205ENST00000473344 SPRR2FQ96RM1 72 aa3.01□□□□□ -1.93
CKS1B-205ENST00000473344 SPRR2EP22531 72 aa3□□□□□ -1.93
CKS1B-205ENST00000473344 SPRR2BP35325 72 aa3□□□□□ -1.93
CKS1B-205ENST00000473344 SPRR2AP35326 72 aa3□□□□□ -1.93
CKS1B-205ENST00000473344 KRTAP12-2P59991 146 aa3□□□□□ -1.93
CKS1B-205ENST00000473344 PRO2289Q9P1D8 64 aa2.97□□□□□ -1.93
CKS1B-205ENST00000473344 KRTAP2-1Q9BYU5 128 aa2.96□□□□□ -1.94
CKS1B-205ENST00000473344 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
CKS1B-205ENST00000473344 KRTAP8-1Q8IUC2 63 aa2.94□□□□□ -1.94
CKS1B-205ENST00000473344 INE1O15225 51 aa2.91□□□□□ -1.94
CKS1B-205ENST00000473344 SPRR2DP22532 72 aa2.91□□□□□ -1.94
CKS1B-205ENST00000473344 R4GN34 69 aa2.9□□□□□ -1.95
CKS1B-205ENST00000473344 KRTAP9-6A8MVA2 160 aa2.89□□□□□ -1.95
CKS1B-205ENST00000473344 MT1XP80297 61 aa2.88□□□□□ -1.95
CKS1B-205ENST00000473344 DSTQ03001 7570 aaKnown RBP2.88□□□□□ -1.95
CKS1B-205ENST00000473344 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.95
CKS1B-205ENST00000473344 SPRR5A0A1B0GTR4 108 aa2.81□□□□□ -1.96
CKS1B-205ENST00000473344 TNP1P09430 55 aa2.8□□□□□ -1.96
CKS1B-205ENST00000473344 KRTAP10-12P60413 245 aa2.76□□□□□ -1.97
CKS1B-205ENST00000473344 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
CKS1B-205ENST00000473344 KRTAP4-3Q9BYR4 195 aa2.62□□□□□ -1.99
CKS1B-205ENST00000473344 HMCN1Q96RW7 5635 aa2.62□□□□□ -1.99
CKS1B-205ENST00000473344 OBSCNQ5VST9 7968 aa2.6□□□□□ -1.99
CKS1B-205ENST00000473344 KRTAP19-3Q7Z4W3 81 aa2.6□□□□□ -1.99
CKS1B-205ENST00000473344 MT1EP04732 61 aa2.57□□□□□ -2
CKS1B-205ENST00000473344 KRTAP19-7Q3SYF9 63 aa2.57□□□□□ -2
CKS1B-205ENST00000473344 MT4P47944 62 aa2.56□□□□□ -2
CKS1B-205ENST00000473344 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
CKS1B-205ENST00000473344 AHNAK2Q8IVF2 5795 aa2.54□□□□□ -2
CKS1B-205ENST00000473344 MT1GP13640 62 aa2.52□□□□□ -2.01
CKS1B-205ENST00000473344 LCE3CQ5T5A8 94 aa2.51□□□□□ -2.01
CKS1B-205ENST00000473344 KRTAP19-5Q3LI72 72 aa2.48□□□□□ -2.01
CKS1B-205ENST00000473344 KRTAP5-10Q6L8G5 202 aa2.48□□□□□ -2.01
CKS1B-205ENST00000473344 LCE3AQ5TA76 89 aa2.46□□□□□ -2.02
CKS1B-205ENST00000473344 MT1MQ8N339 61 aa2.46□□□□□ -2.02
CKS1B-205ENST00000473344 MT1LQ93083 61 aa2.42□□□□□ -2.02
CKS1B-205ENST00000473344 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
CKS1B-205ENST00000473344 KRTAP12-3P60328 96 aa2.36□□□□□ -2.03
CKS1B-205ENST00000473344 KRTAP20-2Q3LI61 65 aa2.33□□□□□ -2.04
CKS1B-205ENST00000473344 KRTAP12-4P60329 112 aa2.3□□□□□ -2.04
CKS1B-205ENST00000473344 SYNE1Q8NF91 8797 aaKnown RBP2.28□□□□□ -2.04
CKS1B-205ENST00000473344 LCE3EQ5T5B0 92 aa2.27□□□□□ -2.05
CKS1B-205ENST00000473344 KRTAP5-5Q701N2 237 aaPredicted RBP2.26□□□□□ -2.05
CKS1B-205ENST00000473344 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
CKS1B-205ENST00000473344 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
CKS1B-205ENST00000473344 LCE1BQ5T7P3 118 aa2.2□□□□□ -2.06
CKS1B-205ENST00000473344 MUC5ACP98088 5654 aa2.15□□□□□ -2.06
CKS1B-205ENST00000473344 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
CKS1B-205ENST00000473344 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
CKS1B-205ENST00000473344 MT1AP04731 61 aa2.06□□□□□ -2.08
CKS1B-205ENST00000473344 KRTAP6-1Q3LI64 71 aa2.06□□□□□ -2.08
CKS1B-205ENST00000473344 KRTAP6-2Q3LI66 62 aa2.02□□□□□ -2.09
CKS1B-205ENST00000473344 LCE3DQ9BYE3 92 aa1.8□□□□□ -2.12
CKS1B-205ENST00000473344 PRM1P04553 51 aa1.77□□□□□ -2.13
CKS1B-205ENST00000473344 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
CKS1B-205ENST00000473344 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
CKS1B-205ENST00000473344 PHGR1C9JFL3 82 aa1.48□□□□□ -2.17
CKS1B-205ENST00000473344 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
CKS1B-205ENST00000473344 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 214.9 ms