RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 KRTAP2-3P0C7H8 128 aa2.89□□□□□ -1.95
HDAC1-205ENST00000472928 KRTAP2-4Q9BYR9 128 aa2.89□□□□□ -1.95
HDAC1-205ENST00000472928 GPR98Q8WXG9 6306 aa2.89□□□□□ -1.95
HDAC1-205ENST00000472928 M0QZ58 72 aa2.88□□□□□ -1.95
HDAC1-205ENST00000472928 KRTAP13-4Q3LI77 160 aa2.88□□□□□ -1.95
HDAC1-205ENST00000472928 R4GN34 69 aa2.87□□□□□ -1.95
HDAC1-205ENST00000472928 A0A0D9SG42 100 aa2.84□□□□□ -1.95
HDAC1-205ENST00000472928 LCE3CQ5T5A8 94 aa2.84□□□□□ -1.95
HDAC1-205ENST00000472928 LUZP6Q538Z0 58 aa2.83□□□□□ -1.96
HDAC1-205ENST00000472928 MT1BP07438 61 aa2.81□□□□□ -1.96
HDAC1-205ENST00000472928 C10orf95Q9H7T3 257 aa2.8□□□□□ -1.96
HDAC1-205ENST00000472928 KRTAP10-5P60370 271 aa2.79□□□□□ -1.96
HDAC1-205ENST00000472928 SPRR2GQ9BYE4 73 aa2.79□□□□□ -1.96
HDAC1-205ENST00000472928 KRTAP2-1Q9BYU5 128 aa2.78□□□□□ -1.96
HDAC1-205ENST00000472928 SPRR2EP22531 72 aa2.76□□□□□ -1.97
HDAC1-205ENST00000472928 SPRR2BP35325 72 aa2.76□□□□□ -1.97
HDAC1-205ENST00000472928 SPRR2AP35326 72 aa2.76□□□□□ -1.97
HDAC1-205ENST00000472928 KRTAP12-1P59990 96 aa2.76□□□□□ -1.97
HDAC1-205ENST00000472928 KRTAP12-2P59991 146 aa2.75□□□□□ -1.97
HDAC1-205ENST00000472928 KRTAP19-8Q3LI54 63 aa2.75□□□□□ -1.97
HDAC1-205ENST00000472928 CAMK2N1Q7Z7J9 78 aa2.73□□□□□ -1.97
HDAC1-205ENST00000472928 SPRR2FQ96RM1 72 aa2.73□□□□□ -1.97
HDAC1-205ENST00000472928 KRTAP10-7P60409 375 aaPredicted RBP2.72□□□□□ -1.97
HDAC1-205ENST00000472928 LCE1EQ5T753 118 aa2.72□□□□□ -1.97
HDAC1-205ENST00000472928 PLAC4Q8WY50 150 aa2.71□□□□□ -1.98
HDAC1-205ENST00000472928 SPRR2DP22532 72 aa2.67□□□□□ -1.98
HDAC1-205ENST00000472928 PP632Q6XCG6 107 aa2.62□□□□□ -1.99
HDAC1-205ENST00000472928 KRTAP8-1Q8IUC2 63 aa2.62□□□□□ -1.99
HDAC1-205ENST00000472928 MT1XP80297 61 aa2.61□□□□□ -1.99
HDAC1-205ENST00000472928 PRO2289Q9P1D8 64 aa2.6□□□□□ -1.99
HDAC1-205ENST00000472928 DSTQ03001 7570 aaKnown RBP2.6□□□□□ -1.99
HDAC1-205ENST00000472928 LCE3EQ5T5B0 92 aa2.59□□□□□ -1.99
HDAC1-205ENST00000472928 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
HDAC1-205ENST00000472928 TNP1P09430 55 aa2.54□□□□□ -2
HDAC1-205ENST00000472928 AHNAK2Q8IVF2 5795 aa2.54□□□□□ -2
HDAC1-205ENST00000472928 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
HDAC1-205ENST00000472928 SPRR5A0A1B0GTR4 108 aa2.53□□□□□ -2
HDAC1-205ENST00000472928 KRTAP9-6A8MVA2 160 aa2.5□□□□□ -2.01
HDAC1-205ENST00000472928 INE1O15225 51 aa2.48□□□□□ -2.01
HDAC1-205ENST00000472928 LCE3AQ5TA76 89 aa2.46□□□□□ -2.02
HDAC1-205ENST00000472928 KRTAP5-10Q6L8G5 202 aa2.43□□□□□ -2.02
HDAC1-205ENST00000472928 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
HDAC1-205ENST00000472928 MT4P47944 62 aa2.36□□□□□ -2.03
HDAC1-205ENST00000472928 KRTAP19-5Q3LI72 72 aa2.36□□□□□ -2.03
HDAC1-205ENST00000472928 KRTAP12-3P60328 96 aa2.35□□□□□ -2.03
HDAC1-205ENST00000472928 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.03
HDAC1-205ENST00000472928 KRTAP19-7Q3SYF9 63 aa2.32□□□□□ -2.04
HDAC1-205ENST00000472928 KRTAP19-3Q7Z4W3 81 aa2.32□□□□□ -2.04
HDAC1-205ENST00000472928 MT1EP04732 61 aa2.3□□□□□ -2.04
HDAC1-205ENST00000472928 KRTAP5-4Q6L8H1 288 aa2.27□□□□□ -2.05
HDAC1-205ENST00000472928 MT1LQ93083 61 aa2.25□□□□□ -2.05
HDAC1-205ENST00000472928 AHNAKQ09666 5890 aaKnown RBP2.23□□□□□ -2.05
HDAC1-205ENST00000472928 MT1GP13640 62 aa2.21□□□□□ -2.06
HDAC1-205ENST00000472928 LCE3DQ9BYE3 92 aa2.21□□□□□ -2.06
HDAC1-205ENST00000472928 MT1MQ8N339 61 aa2.2□□□□□ -2.06
HDAC1-205ENST00000472928 KRTAP4-3Q9BYR4 195 aa2.18□□□□□ -2.06
HDAC1-205ENST00000472928 KRTAP20-2Q3LI61 65 aa2.16□□□□□ -2.06
HDAC1-205ENST00000472928 MUC5ACP98088 5654 aa2.14□□□□□ -2.07
HDAC1-205ENST00000472928 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
HDAC1-205ENST00000472928 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.08
HDAC1-205ENST00000472928 KRTAP5-1Q6L8H4 278 aa2.08□□□□□ -2.08
HDAC1-205ENST00000472928 KRTAP5-5Q701N2 237 aaPredicted RBP2.07□□□□□ -2.08
HDAC1-205ENST00000472928 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
HDAC1-205ENST00000472928 KRTAP5-8O75690 187 aa2□□□□□ -2.09
HDAC1-205ENST00000472928 KRTAP5-2Q701N4 177 aa1.94□□□□□ -2.1
HDAC1-205ENST00000472928 KRTAP4-4Q9BYR3 166 aa1.94□□□□□ -2.1
HDAC1-205ENST00000472928 MT1AP04731 61 aa1.91□□□□□ -2.1
HDAC1-205ENST00000472928 KRTAP6-1Q3LI64 71 aa1.89□□□□□ -2.11
HDAC1-205ENST00000472928 OBSCNQ5VST9 7968 aa1.85□□□□□ -2.11
HDAC1-205ENST00000472928 LCE1CQ5T751 118 aa1.82□□□□□ -2.12
HDAC1-205ENST00000472928 LCE1BQ5T7P3 118 aa1.82□□□□□ -2.12
HDAC1-205ENST00000472928 KRTAP6-2Q3LI66 62 aa1.79□□□□□ -2.12
HDAC1-205ENST00000472928 PRM1P04553 51 aa1.59□□□□□ -2.15
HDAC1-205ENST00000472928 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
HDAC1-205ENST00000472928 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
HDAC1-205ENST00000472928 KRTAP21-2Q3LI59 83 aa1.28□□□□□ -2.2
HDAC1-205ENST00000472928 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
HDAC1-205ENST00000472928 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 12.9 ms