RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
SPC25-203ENST00000472216 COA5Q86WW8 74 aa3.94□□□□□ -1.78
SPC25-203ENST00000472216 UQCR11O14957 56 aa3.91□□□□□ -1.78
SPC25-203ENST00000472216 RPL39P62891 51 aaKnown RBP3.9□□□□□ -1.79
SPC25-203ENST00000472216 COX7BP24311 80 aa3.87□□□□□ -1.79
SPC25-203ENST00000472216 MT1XP80297 61 aa3.87□□□□□ -1.79
SPC25-203ENST00000472216 LINC00158P58513 81 aa3.85□□□□□ -1.79
SPC25-203ENST00000472216 KRTAP10-7P60409 375 aaPredicted RBP3.84□□□□□ -1.79
SPC25-203ENST00000472216 SPINT4Q6UDR6 99 aa3.83□□□□□ -1.8
SPC25-203ENST00000472216 LINC00575Q6W349 94 aa3.82□□□□□ -1.8
SPC25-203ENST00000472216 Q6ZRX8 168 aa3.82□□□□□ -1.8
SPC25-203ENST00000472216 R4GN34 69 aa3.82□□□□□ -1.8
SPC25-203ENST00000472216 SPRR1BP22528 89 aa3.8□□□□□ -1.8
SPC25-203ENST00000472216 Q6ZQY7 126 aa3.8□□□□□ -1.8
SPC25-203ENST00000472216 CDKN2A-AS1Q9UH64 79 aa3.8□□□□□ -1.8
SPC25-203ENST00000472216 KRTAP19-3Q7Z4W3 81 aa3.79□□□□□ -1.8
SPC25-203ENST00000472216 Q8N9L7 120 aa3.79□□□□□ -1.8
SPC25-203ENST00000472216 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
SPC25-203ENST00000472216 COX17Q14061 63 aa3.76□□□□□ -1.81
SPC25-203ENST00000472216 LINC00472Q9H8W2 130 aa3.76□□□□□ -1.81
SPC25-203ENST00000472216 A0A1B0GU69 56 aa3.75□□□□□ -1.81
SPC25-203ENST00000472216 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
SPC25-203ENST00000472216 H1FX-AS1Q4G0G2 97 aa3.71□□□□□ -1.82
SPC25-203ENST00000472216 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
SPC25-203ENST00000472216 KRTAP10-12P60413 245 aa3.7□□□□□ -1.82
SPC25-203ENST00000472216 WFDC13Q8IUB5 93 aa3.7□□□□□ -1.82
SPC25-203ENST00000472216 DSCR10P59022 87 aa3.69□□□□□ -1.82
SPC25-203ENST00000472216 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
SPC25-203ENST00000472216 IGLV5-48A0A075B6I7 105 aa3.64□□□□□ -1.83
SPC25-203ENST00000472216 K7EQZ3 153 aa3.64□□□□□ -1.83
SPC25-203ENST00000472216 SYNE1Q8NF91 8797 aaKnown RBP3.64□□□□□ -1.83
SPC25-203ENST00000472216 ACYP2P14621 99 aa3.63□□□□□ -1.83
SPC25-203ENST00000472216 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
SPC25-203ENST00000472216 TP53AIP1Q9HCN2 124 aa3.63□□□□□ -1.83
SPC25-203ENST00000472216 H0YAA0 97 aa3.61□□□□□ -1.83
SPC25-203ENST00000472216 KRTAP12-4P60329 112 aa3.61□□□□□ -1.83
SPC25-203ENST00000472216 DEFB105AQ8NG35 78 aa3.6□□□□□ -1.83
SPC25-203ENST00000472216 PP632Q6XCG6 107 aa3.59□□□□□ -1.83
SPC25-203ENST00000472216 MT1GP13640 62 aa3.57□□□□□ -1.84
SPC25-203ENST00000472216 CRIPTQ9P021 101 aa3.57□□□□□ -1.84
SPC25-203ENST00000472216 OBSCNQ5VST9 7968 aa3.56□□□□□ -1.84
SPC25-203ENST00000472216 INE1O15225 51 aa3.56□□□□□ -1.84
SPC25-203ENST00000472216 PLAC4Q8WY50 150 aa3.55□□□□□ -1.84
SPC25-203ENST00000472216 MT1EP04732 61 aa3.52□□□□□ -1.85
SPC25-203ENST00000472216 KRTAP19-7Q3SYF9 63 aa3.47□□□□□ -1.85
SPC25-203ENST00000472216 MT1MQ8N339 61 aa3.45□□□□□ -1.86
SPC25-203ENST00000472216 MMP24-AS1A0A0U1RRL7 71 aa3.44□□□□□ -1.86
SPC25-203ENST00000472216 LCE3CQ5T5A8 94 aa3.44□□□□□ -1.86
SPC25-203ENST00000472216 KRTAP4-3Q9BYR4 195 aa3.41□□□□□ -1.86
SPC25-203ENST00000472216 MRPL34Q9BQ48 92 aaKnown RBP3.39□□□□□ -1.87
SPC25-203ENST00000472216 KRTAP9-6A8MVA2 160 aa3.36□□□□□ -1.87
SPC25-203ENST00000472216 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
SPC25-203ENST00000472216 S4R3F8 94 aa3.24□□□□□ -1.89
SPC25-203ENST00000472216 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
SPC25-203ENST00000472216 C10orf95Q9H7T3 257 aa3.21□□□□□ -1.9
SPC25-203ENST00000472216 MT1LQ93083 61 aa3.14□□□□□ -1.91
SPC25-203ENST00000472216 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
SPC25-203ENST00000472216 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
SPC25-203ENST00000472216 KRTAP19-5Q3LI72 72 aa3.06□□□□□ -1.92
SPC25-203ENST00000472216 KRTAP13-4Q3LI77 160 aa3.03□□□□□ -1.92
SPC25-203ENST00000472216 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
SPC25-203ENST00000472216 A0A0D9SG42 100 aa2.88□□□□□ -1.95
SPC25-203ENST00000472216 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
SPC25-203ENST00000472216 KRTAP12-1P59990 96 aa2.86□□□□□ -1.95
SPC25-203ENST00000472216 LCE3AQ5TA76 89 aa2.85□□□□□ -1.95
SPC25-203ENST00000472216 M0QZ58 72 aa2.83□□□□□ -1.96
SPC25-203ENST00000472216 KRTAP6-1Q3LI64 71 aa2.72□□□□□ -1.97
SPC25-203ENST00000472216 MT1AP04731 61 aa2.65□□□□□ -1.99
SPC25-203ENST00000472216 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
SPC25-203ENST00000472216 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
SPC25-203ENST00000472216 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
SPC25-203ENST00000472216 TNP1P09430 55 aa2.46□□□□□ -2.02
SPC25-203ENST00000472216 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
SPC25-203ENST00000472216 KRTAP12-3P60328 96 aa2.25□□□□□ -2.05
SPC25-203ENST00000472216 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
SPC25-203ENST00000472216 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
SPC25-203ENST00000472216 PRM1P04553 51 aa1.87□□□□□ -2.11
SPC25-203ENST00000472216 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 147.9 ms